Trichomycterus rosablanca: 134331154
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Entry
134331154 CDS
T09921
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
trn
Trichomycterus rosablanca
Pathway
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134331154 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134331154 (arhgef18b)
Membrane trafficking [BR:
trn04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134331154 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
134331154
NCBI-ProteinID:
XP_062868513
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Position
17:complement(1472011..1501027)
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AA seq
1052 aa
AA seq
DB search
MGLQIQRKHKARKKVTSVSLGFLLHCHRISWHLLDSSSRFHASRFSAASREPCLSSDGSL
RPVSGMTVPPRGPGGQQNALSSNHTPSTTSSSSSFTAEMDEVDSFRLKRHSEDAISIAPS
TTESSIVEDAYYASVRAELDSMAQDLEVESWSLAVDQPFLKKHSKETIKRQDVIYELIQT
EMHHVRTLKIMLRVYVHGLREALQLDERSLDCLFPCLESLLDLHSRFLSRLRERRQETLE
PGGERNYVIHRVADILTEQFSGEHGDWMKECYGAFCSRHSEAVTYYKEQLQSNKKFQNLI
RKINTLSIVRRLGVPECILLVTQRITKYPVLVERLLQYTEAGTEEHEELDAALNLIKGVI
VQVDARVDLCQRETRLKEIVSKMEPKPFSKIKDGHIFRKEDVLQGRRRLLHEGTVNWKAA
SGRLKDILAVLLTDVLLLLQEKDQRYVFSAVDGKPSVISLQKLIVREVAHEEKAMFLICA
SSNEPEMYEIHTSSKDERNTWITLIRQAVDSCPLTAEEIFSEEKDARLQRYREIQDCLTV
KDTQITRALTEKQQLYAELAECAGGLEDSGARRRLLLRGDVLDLQQGEQLLKGAITEVEN
LQNLLFSGVKVPPLLDAQSSIVLPRRAGTFGGFDSTFSVLQKNGSVKKHSNGAGKSRDRS
QRASSDPQLKEVCASQSLNESLLSISQEDAPSPTWNLTWSSSRFPQAEVYDRVLVLSQSL
YSLQAIVSQQDSMIELQRASLGSAERQRGTDVLLEQEKQRNLEKQREEMARFQRIQAQQQ
QEQERWERERLKQRRQNEAEQTRLQERGDECRRLEERLAQERQELENQRQKYQQDLERLR
ESTRAVEKERERLEQQRKMKKRNTAPIRSTVYAQESASLSLSSSFNGEVMGGDSSLQSRP
LVRSSLSVSPADYPERTAMPAKTEVPIHLVSTTNQLHKQGGVQQQIPTKLAMLKSKDKSG
KGKSSHRTDSSASVDMKQIPVLKLTARDSESSLKVRSSVCPHQQPPAPPPQSTDSSSVTD
RYTPDPLRAQNQSATPTYAASDDKEKEDVIFF
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggactgcagattcagaggaagcacaaggctcggaaaaaggtcacgtcagtctctttg
ggtttcctgctccactgccaccggataagctggcatctcctggactcgtcctcacgcttt
cacgcgtctcgtttctccgcagcctccagggagccgtgcctctcctccgatggatccctt
cgccccgtttcaggcatgacggtcccgcccagaggacccggcggccagcaaaacgcgctc
agctcgaaccacacgcccagcaccaccagcagctccagctccttcacggcagagatggac
gaagtggattcattcaggctaaaacgccactctgaggatgccatctccatcgccccatct
actacagagtccagcatagtggaagatgcgtactacgccagcgttcgagcagagctggac
tccatggcgcaggacttagaggtggagtcgtggagtttggccgtggatcagccgttccta
aagaaacattccaaagagacgatcaagaggcaggatgttatatacgaactgatccagacg
gagatgcaccacgtgcgaacgctgaagataatgctgcgcgtctacgttcacggcctgcgg
gaggcgctgcagctggacgagcgcagcctggactgtttgtttccgtgcctggaaagcttg
ctggatctgcacagccgtttcctgtcccgcctccgggaacgccgacaggagacgctggaa
ccgggcggcgagcgcaactacgtcatccacagagtggccgacatcctcaccgaacagttc
tcaggtgagcacggggactggatgaaggaatgctacggtgcgttctgcagtcggcacagc
gaagccgtcacctactacaaagagcagctgcagagcaacaagaagtttcagaacctcatc
aggaaaatcaacactctgtcgatagtgcggcggctgggcgttcccgaatgcatcctcctc
gtgacccagcgcatcacgaagtaccccgtcctggtggagcgcctgcttcagtacacagaa
gccggcaccgaggagcacgaggaactggacgcggcgctcaacctgatcaagggcgtgatc
gtgcaggtggacgcccgggtcgacctctgccagagagagacgcgcctcaaagagatcgtc
tccaagatggagcccaaaccgttcagcaagatcaaagacggtcacatattcaggaaggag
gacgtgctgcagggcaggcggaggctcctgcacgagggcaccgtgaactggaaggctgct
tccggaaggctcaaggatatcctcgctgtactgctgaccgatgtgctgttgttgctacaa
gagaaggatcagagatacgttttctcagctgtggacgggaagccgtcggtgatctccctg
cagaagctgatcgtcagggaggtggcacacgaggagaaggccatgttcctcatctgcgcc
tcctccaacgagcccgagatgtacgagatacacacgtcgtctaaagacgagcgcaacacc
tggatcaccctcatccgccaggcggtcgacagttgtcctcttacagcggaggaaatcttc
agtgaggagaaggacgccagactgcagcgctacagagaaattcaagattgtctgactgtg
aaggacactcagatcactcgggctctaacagagaagcagcagttatacgccgagctggcc
gagtgtgcaggaggtctggaggactcaggagctcggcgtagacttctgctgagaggagac
gtcctggacctccagcagggggagcaactgctcaagggagccataacagaggtggagaat
ctgcagaacctgcttttctcgggcgtgaaagttcctccactgttggatgcccagagctca
attgtgctacccaggagagcgggcaccttcgggggcttcgacagtaccttcagcgtcctg
cagaagaacggcagcgtgaagaagcactcgaacggagcggggaagtccagagacaggagc
cagcgcgccagctcagatcctcagctcaaagaagtctgtgccagtcagagcctcaacgag
tcgttactctccatctctcaggaagacgcgccctcaccgacctggaatctgacctggtcc
agctccaggttcccccaagcagaggtgtatgatcgagtgctggtgctctcacagagtctg
tacagtctgcaggccatcgtctctcagcaggacagcatgatcgagctgcagcgggcctcc
ctgggttcggcggagcgtcagcggggcacggacgtgctcctggagcaggagaagcagcgg
aacctggagaagcagcgtgaggagatggctcggttccagcgcatccaggcgcagcagcag
caggagcaggagcgctgggagcgcgagcgtctgaagcagcgcaggcagaacgaggccgag
cagaccaggctgcaggagcggggggacgagtgcaggaggctggaggagaggctggcccag
gagaggcaggagctggagaaccagagacagaagtaccagcaggacctggagaggctgagg
gagtccacgcgggccgtggagaaggagcgggaacgtctcgagcagcagaggaagatgaag
aaacgcaacacggcgccaatcaggagtacggtgtacgcccaggagtcagcatcgctttcc
ctgtcgtccagttttaacggcgaggtgatgggaggcgattcgtccctccagtcccgcccc
ctggtccgctccagcctctccgtgtctcccgccgactaccccgaaaggacggccatgccg
gcgaaaaccgaggtgcccatccacctggtgagcaccaccaaccagctgcacaagcagggc
ggagttcagcagcagatccccaccaaactggccatgctgaagagcaaagacaagagcggc
aaagggaagagctcgcaccgcacggacagctcggcttctgtagatatgaagcagattccg
gttctgaaactgaccgcccgggactccgagagctcgctgaaggtccggagctccgtctgt
ccccatcagcagcccccggctccaccacctcagagcacagattcctccagtgtgacggac
agatacacccctgaccctctgagagcgcagaaccagagcgccacgcccacgtacgccgcc
agcgacgacaaagagaaggaggacgtcattttcttctga
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