KEGG   Trichomycterus rosablanca: 134331168
Entry
134331168         CDS       T09921                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
trn  Trichomycterus rosablanca
Pathway
trn03082  ATP-dependent chromatin remodeling
trn03083  Polycomb repressive complex
trn04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    134331168 (rbb4l)
   03083 Polycomb repressive complex
    134331168 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    134331168 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:trn03036]
    134331168 (rbb4l)
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     134331168 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     134331168 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     134331168 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     134331168 (rbb4l)
    PRC2.2
     134331168 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     134331168 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    134331168 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    134331168 (rbb4l)
   NuRF complex
    134331168 (rbb4l)
   NuRF complex (fruit fly)
    134331168 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 134331168
NCBI-ProteinID: XP_062868535
LinkDB
Position
17:22882261..22889021
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQYDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LESQAS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcggataaagaagtgtatgatgatgctgtagaagaaagggtaataaacgaagaatac
aaaatatggaagaaaaacaccccttttctctacgatctggtcatgacacatgctctggaa
tggccaagcttaacagtgcagtggttgccagatgtgaatagaccagaaggaaaggattac
gccgttcatagactggtgttgggaacacacacttcagatgaacagaaccacttggttatc
gccagtgttcaaattcctaatgatgatgctcagtatgatgcttcacattacgacagtgaa
aaaggagcagagtttggtggatttggctctgtgagtggaaagattgagatcgaaataaag
atcaaccatgagggagaggtaaatcgtgccagatacatgccacagaacccctgcataatc
gccaccaagacaccaacatctgatgtgctagtgtttgactacaccaaacacccttccaaa
ccagatcctagtggtgaatgcagtccagatctaagactccgtggccatcagaaagagggc
tatggtctctcatggaaccctaacctgagtggaaacctgcttagtgcatcagacgatcat
acaatctgtctgtgggacatcagtggaagccctaaagaaggaaagattgtcgatgccaaa
accatctttactggccacactgctgtggtggaggatgtgtcctggcacttactacacgag
tcacttttcggctcagtggctgatgaccagaaacttatgatctgggacaccagatccaac
aacacatctaagcccagtcactcagtagatgctcacactgctgaagtcaactgcttgtcc
tttaatccctacagtgagttcatactggccactggctctgcagataagactgtggccctg
tgggatctgcgcaacctaaagctgaagcttcactcttttgagtcacacaaggatgaaatc
tttcaggttcagtggtctccacataatgaaacaattctggcttccagcggcacagacaga
cgactcaacgtatgggacttgagtaaaattggagaggaacagtctgctgaagatgctgaa
gatggacctccagaactgctgttcattcatggaggccacacagcaaagatctcagatttc
acatggaatcctaatgaaccctgggtgatctgctccgtttctgaagataacatcatgcaa
gtttggcaaatggcagagaacatttacaacgatgaggaaccagacacacctgcctcagag
cttgagagccaggcctcctaa

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