Trichomycterus rosablanca: 134331195
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Entry
134331195 CDS
T09921
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134331195 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134331195 (efl1)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-60S particles
GTPases
134331195 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
134331195
NCBI-ProteinID:
XP_062868569
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All DBs
Position
17:30069243..30114724
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AA seq
1092 aa
AA seq
DB search
MGHTSLERIITLQKKASNIRNICILAHVDHGKTTLADCLVASNGIISTRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYTSGQDEYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQAVLRQAWLENIRPVLVLNKIDRLIVELKLSPQEAYTHLQKILEQVNAVTGTL
FTSTVLEERAVKEAQVQDERPEADGGEQVYDWSSGLEETDDSHLYFSPDQGNVVFASAID
SWGFSVCQFAEIYSKKMGIRSEILQKTLWGDFYLNTKAKKIMKGAQVKGKKPLFVQLVLE
NIWSLYDAVVIRRDKEKVEKMVTSLGLKLMTRDLRHNDPKVLLSAICSQWLPLSQAVLSM
VCEMLPAPTEVSSERVEKLMSVGVRRFESLPSKTQQLKSAFLACSSGDSAPVIVFVSKMF
AVDPKALPQNKQRPLTQEEIAQRRELARQRHAERRAANQGSENPDPGNHTHADADALREQ
TEALTLRPAPEDEDAEHFVAFARVYSGVVRRGQRVFVLGPKYDPAVALQTLSDEGSVPDS
APSVPHMACCTLDRLYLLMGRELEELDEVPAGNVLGIGGMEEFILKSATISTSAACPPFT
PLNFDATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCVEVLIQESGEHVLVTAGEVHLQ
RCLDDLRQRFAKIEISASAPIIPFRETVIRPPKVDMVNEDLGRQQKVAVIRQTREEQAKL
PEGVQVDSGGLVTLTTPNRMAAVGVRAVPLPEDATGLLEENGENIRTMENFNLMAREGKA
LEISARTLEEIRSFRAELEKRLQGHRWRNAVERIWAFGPRRYGPNILLNGVDGYQRPSVW
QCLGSERNEGAALRDFDNSVVSGFQLATLSGPLCEEPLMGVCFTVETWDVRLPQKDSAVN
GEPGGEPDLGGTGEAQSRRKDAADCYGPFSGQLIAAVKEACRYAFQAKPQRLMAAMYTCE
VMTTADVLGRVYGVLSKREGRVLNEEMKEGSDVFIIKAVLPVAESFGFADEIRKRTSGLA
SPQLVFTHWEVISSDPFWVPTTEEEYLHFGEKADSANQALKYMNGVRRRKGLYVEEKIVE
HAEKQRTLSKNK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgggccacacgagtttagagagaatcatcacactacagaagaaagcatcgaacatcagg
aacatctgcattctggcacacgtggatcatgggaaaacgacgctggccgattgtctggtg
gcgagtaacggcatcatttccactcgcctggcaggaaagctccggtacctggacagtcgg
gaggacgagcagatccgaggaatcaccatgaagtccagcgccatctccttacattacaca
tcaggacaggacgagtatctgatcaatctgatcgactctcccggtcacgtcgatttctcc
tccgaggtctccacggcggtgcggctgtgcgacggcgccatcgtggtggtggatgccgtc
gagggggtgtgtcctcagacccaggcggtgctgaggcaggcgtggctggagaacatccgc
ccggtgctcgtcctcaacaagatcgaccgtctgatcgtggagctgaagctcagtcctcag
gaggcctacacgcacctccagaagatcctcgaacaggtgaacgcagtgacggggacgctc
ttcacctctacggttctggaggagcgggcggtgaaggaggctcaggttcaggacgagcgg
cccgaggctgatggaggggagcaggtttacgactggagctccggactggaggagacggac
gactcgcacctgtatttcagtcctgatcagggtaacgtggtgttcgccagcgccatcgac
tcctggggcttcagcgtttgccagtttgctgagatctacagtaagaagatggggattcga
tcagagatccttcagaagaccctgtggggggatttctacctgaacaccaaggccaaaaag
atcatgaaaggagcgcaggttaaaggaaagaagccgctcttcgttcagctggttctggag
aacatctggagtttatacgacgccgtggtgatccggagagataaggagaaggtggagaag
atggtgacctcactgggattaaagctcatgacccgcgacctccggcacaacgaccccaaa
gtgctcctgagcgccatctgcagtcagtggttaccgctgtctcaggccgtgctgtcgatg
gtgtgtgagatgttaccggctcccactgaagtgagctctgagcgggtggagaagctgatg
agtgtcggtgtgcgtcggttcgaatccctgcccagtaaaacccagcagcttaaatcagcg
tttctggcgtgctcgagtggagattcggctcccgtcatcgtttttgtctccaagatgttt
gccgtggacccgaaggctcttccacagaacaaacagaggccgctgactcaggaggagatc
gcccagcgccgggaactggcccgacagcgacacgcagagagacgagcggccaatcagggc
tcggagaatcccgacccgggaaaccacacccacgcagacgccgacgctctccgcgagcag
acggaggccctgacgctgagacccgcgcccgaagacgaggacgccgagcacttcgtggcc
ttcgcccgcgtctacagcggggtggtgcgccggggtcagcgggtgttcgtgctgggcccc
aaatacgaccccgccgtggccctgcagacgctgtcggacgaaggttcggttcctgactcc
gccccctccgtgccccacatggcctgctgcaccctggaccgtctgtatctcctgatgggt
cgtgagctggaggagctggacgaggttccagcgggaaacgtcctgggaatcggtggaatg
gaggagtttatcctgaaatcagccaccatctccaccagcgccgcctgtccccccttcacg
ccgcttaacttcgacgccacgcccatcgtcagagtcgccatcgaacccaaacatcccagt
gagatgcccaagctggtacgtgggatgcggttgctgaaccaggccgacccctgcgtggag
gttttgatccaggagagcggcgagcacgtcctggtcaccgccggagaggttcacctgcag
cgctgcctcgacgacctccgccaacgctttgccaaaatcgagatcagcgcctcggccccc
atcatcccgttccgcgagacggtgatccgcccgccaaaggtggacatggtgaacgaggac
ctggggcgccagcagaaggtggcggtgatccggcagaccagagaggagcaggccaagctt
cccgagggggtccaggtggactcgggcggcctggtgaccctcaccacgcccaacaggatg
gccgccgtcggcgtccgggcggtgccgctccccgaggacgccaccgggctgctggaggag
aacggcgagaacatccggaccatggagaacttcaacctgatggctcgagagggtaaagct
ctggagatcagcgcccggacgctggaggagatccggagcttcagagccgagctggagaag
cggctgcagggtcaccgctggaggaacgccgtggagcgtatctgggcgttcgggccgcgc
cgctacggtcccaacatcctgctgaacggcgtggacgggtaccagcgaccctccgtgtgg
cagtgcctcgggagcgagaggaacgagggcgcggcgctcagggatttcgataacagcgtg
gtcagcgggttccagctcgccacgctctcgggccccttgtgcgaggagccgctgatgggc
gtgtgcttcaccgtggagacctgggacgtgaggttacctcagaaggactcggcggtgaac
ggagaaccgggcggagaaccggacctcggaggcaccggtgaggcacagagccggcggaag
gacgcggcggattgttacgggccgttttcggggcagctcatcgccgccgtgaaggaggcg
tgccggtacgccttccaggccaaacctcagcgcctcatggcggccatgtacacctgcgag
gtcatgactacggccgacgtgctaggccgagtgtacggcgtgctctccaagcgtgagggt
cgggtcctgaacgaggagatgaaggaagggtcggacgtcttcatcatcaaagccgtcctg
ccggtggccgagagtttcggattcgccgacgagatcaggaagagaaccagcggcctggcc
agtccacaactggtcttcacccactgggaggtgatctccagcgaccccttctgggtgccc
accaccgaggaggagtacctgcacttcggggagaaggcggattcggccaatcaggcgctg
aagtacatgaacggcgtacggaggcgtaagggtctgtacgtggaggagaagatcgtggag
cacgccgagaagcagcgcacgctcagcaagaacaagtga
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