Trichomycterus rosablanca: 134331199
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Entry
134331199 CDS
T09921
Symbol
neo1a
Name
(RefSeq) neogenin 1a
KO
K06766
neogenin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04350
TGF-beta signaling pathway
trn04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134331199 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134331199 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134331199 (neo1a)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
DCC/UNC5 family
134331199 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
Pur_ac_phosph_N
ig
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Ig_Rha78A_N
Interfer-bind
NDNF
fn3_SORL1
fn3_2
Fn3_Dep-1_3rd
V-set_CD47
EphA2_TM
CD34_antigen
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
134331199
NCBI-ProteinID:
XP_062868575
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All DBs
Position
17:8463320..8652687
Genome browser
AA seq
1411 aa
AA seq
DB search
MAERGAGLLLSLLWFGSLCSLAPAALHPHKVRQFSPFWFSVEPSDTLAVRGSPVLLNCSV
YSELPAKVHWKKDGSFLNLASDDRRQVLPDGSLLISSVMHSKHNKPDEGVYQCVATIDSL
GTVISRTARLNVAGTPRFSGQPEARSVRLGDSQVLSCEVNADLMSFVRWEHEKMPVQLDQ
RVYTLPSGALVISNATETDAGLYRCVLENAGPTKTSDEAQLHILPETMEEQRLEFLRQPV
SVSRVVGEDLLLPCVVSGFPAAFVRWTRNDQPINDSDGRFQLLGRGSLQIYNLTEEDAGI
YSCLADNTNDSIEAQAELTMQVPPQILKKPSNTYAHEATDIMFECEATGKPAPTVKWVKN
GDAVVPSDYFRIVKEQNLQVQGLMKTDEGFYQCLAENEAGNVQASAHLLILDKGSGDSVV
PGPVPSAPRDVVASLVSTRFIKLTWRQPVEPHGDDITYSVYYGVEGAKRERTVNTSRPGE
MQVTIQNLKPDTKYSFRVVAHNKHGPGESSAPLKVATQAEVQVPGPAPNFHVTVQSPTSV
LLSWDKPLTGNGDIQNYKVYYMEKGLGNEKDVDVSGLSYTMTGLKKFTEYNFRVVAYNKH
GPGVSTDDVSVRTYSDVPGAAPQNLTVEVLNSKSLMVRWQPPPGDAQNGEITGYKIRYRK
GQRKSDVSEISTGVQLSQLLEGLQRGTEYTVRVAAMTMNGTGPSTDWSTAETFESDLDES
RVPDVPGSLHVRALVNSIVVSWSPPLNQDIVIRGYIIGYGIGSPHAQTIKVDYKQRFYSI
ENLDPSSHYVITLKAFNNVGEGIPLYESANTRPQSVPDPIPMMPPVGVQASVLSHDTIKV
TWADNSLAKNQKITDARFYSVRWKTNIPANTKIKTANTTNLHHVVTGLKPNTLYEFSVMV
TKGRKSSTWSMTAHGTTFEATPSSAPKDVTVVSKEGRPRTIIVNWQPPSEANGKITGYII
FYSTDVNAVAHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSKGMGPMSDAVQFRTP
KAEASDKMANDQASGMPLKPGRSPMPDPGIGKSGMTGGDNHILVIVIIVSVGVFTIIVVV
VGTFLCTRRSTSQQKKKRAACKATNGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEP
NPVMTDTPIPRSSQDITPADSTIDPMLQRRNSFRGHESEDSMSTLAGRRGMRPKMMMPFD
AQPPQPVISAHPIHSLDSHHHHYHLGSLASPNRSYLHHASSPRPIASSISHLDRADSSES
GRNTPPSTDLLPASAQPSCSLDHSETDISYHSSVAEEEPSYPPTAHVRPTHPLKSFAVPA
VPAHGQAYEGVALPSTPLLSAPHSVKTASIGTLSRTRTPVPVTAPNIPDVSDGSRMLEEC
ENKYGKYDKDELSEEMAHLEGLMKDLNAITS
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggagcggggttgctcctctctctcctctggttcggctcgctgtgttcg
ctcgctcctgctgctttacacccacacaaagtgaggcagttcagtcctttctggttctcc
gtggagccctcagacacgttggcggtgaggggatcacccgttctgctcaactgctccgtc
tacagcgagcttccggccaaggtgcactggaaaaaggacggttcgtttctgaacctggca
tcggacgatcgcagacaagtcttacccgacgggtcgttgctcatcagctctgtgatgcac
tctaaacacaacaaacctgatgagggcgtgtaccagtgtgtggccaccatcgacagcctg
ggcaccgtcatcagtcgcacagcaagacttaacgtagcaggtacgccccgtttctccggg
cagcccgaggcgaggtcggtacgactgggagacagccaggtactgagctgtgaggtcaat
gcagacctaatgagctttgttcggtgggagcatgagaagatgcccgtgcagctggatcag
agggtgtacacgttacccagcggtgctctggtcatcagcaacgccacagagacagatgca
ggattgtaccggtgtgtgctggagaacgctggacccaccaagaccagcgacgaggctcag
ctccacatcctgcctgaaacaatggaggagcagagactagagttcctcaggcagccggtc
tccgtgtccagggtggtaggagaggacttgctgctcccctgtgtggtgagtggatttccg
gcagccttcgtccgctggacgcgcaacgatcagcctatcaatgacagcgatgggcgcttt
cagctgctcggcaggggaagcctacagatctataaccttaccgaggaggacgctgggata
tacagttgcctggccgacaacaccaacgattccattgaagcacaggctgagctcaccatg
caagttcctccacagattctgaagaagccatccaacacttacgctcacgaggctacggac
atcatgtttgaatgtgaggcaactggcaagcctgcacccactgtcaaatgggtcaagaac
ggagatgctgtggttcccagcgactatttcaggattgttaaggagcagaatctgcaggtg
cagggtctgatgaagacggacgagggattttatcagtgtctagcagagaatgaagcagga
aatgtacaagccagcgctcatctcctcattctagacaaaggctccggagacagcgtcgtt
cctggccccgtaccctcggccccccgtgatgtagtggcctcactcgtctccacccgcttc
atcaagcttacctggcgtcagccggtcgagccccatggcgatgacatcacctattctgtc
tactacggtgtggaaggtgctaagagggaaagaacggtgaacaccagccggccgggtgaa
atgcaggtcaccatccagaacctcaaaccagataccaagtactcatttcgtgtggtggcc
cacaataaacacggcccaggagagagctcagcgcctctgaaggtggccacccaggcagaa
gtacaagtaccaggacctgctcctaacttccacgtcacagtccagtcacccacatctgtc
ctcctgagctgggacaaaccccttactggaaatggtgacatacagaactacaaagtgtac
tacatggagaaaggactgggcaatgaaaaggacgttgacgttagtggactctcttacacc
atgaccggactgaagaagttcacagaatacaacttcagagttgtggcctataacaagcac
ggacctggagtctctacagacgatgtgtcagtgcggacctactcggacgtccccggtgct
gcgccgcagaacctgaccgtggaggtgctaaactcgaagagtctcatggttcgatggcag
ccccctccaggagacgcccaaaacggagagatcacgggctataagatccgctacaggaag
ggccagaggaagagcgacgtttctgaaatcagcacaggagtccagctcagtcagctttta
gagggtttgcagcgtggaacagaatacacagtgcgtgtggcagccatgacgatgaacggt
acaggaccttctacagactggtccactgctgagaccttcgagagtgatctggatgagtct
cgagtacctgatgtaccaggttctctgcatgtccgggctctggtgaacagcatcgtggtg
agctggtctcctcctttaaaccaggacattgtgatccgaggttacatcattggctatgga
ataggcagcccacatgctcagaccattaaagtcgactacaaacagagattctacagcatc
gagaacttggatcccagctcgcactatgtgatcacgctgaaggccttcaacaatgtgggg
gagggcattccgttgtacgagagtgctaacacgcgaccccagtcagtaccagaccccatt
cccatgatgcctcctgtgggcgttcaggcttcagttctgagccatgacactatcaaggtc
acgtgggcagacaactcgctggctaagaaccagaagatcaccgatgcacgcttctactcg
gtacgctggaagaccaacataccagccaacactaagattaagaccgccaacactaccaac
ctgcatcacgtggtgaccggtttgaaacccaataccctgtacgaattctccgtcatggtg
accaagggcagaaaaagcagcacttggagcatgaccgctcatggaaccacctttgaagca
acgcccagctctgcccccaaagacgtgactgtggtcagtaaggagggacgcccacgcacc
atcatagtcaactggcagcctccgtctgaagccaacggcaaaatcacaggttacattatc
ttctacagcactgatgtgaatgctgtggcccacgactgggttattgagcctgtggtgggg
aaccggctcacccatcagatccaggaactgaccctcgataccacgtattacttcaaaatc
caggctcgaaactctaagggcatgggacccatgtctgacgcggtccaattccgcactcca
aaagctgaagcttcagacaaaatggctaatgatcaagcttctgggatgccgttgaaacca
ggcagatctcctatgccggatcctggcattggaaaatcaggaatgactggaggggacaat
cacatcctggtgatcgtcatcatcgtgtctgtgggagtcttcaccatcatcgtggtggtg
gtgggaacgttcctctgtacacgccgttccacctcccagcagaaaaagaaacgagctgcc
tgcaaggccaccaatggctcacacaagtataaagggaactccaaggacctcaagccaccc
gatctgtggatccatcatgagcgattggagcttaaacccatcgataagtcgcccgagccc
aacccggtcatgacggacaccccaatcccacgctcctctcaagatatcactcctgcggat
agcaccatagatccgatgcttcagagacgaaattccttccgtggccatgaatcagaggac
agcatgtctacattggcaggtcgtcgaggaatgagacctaaaatgatgatgccctttgat
gcgcagccccctcagcctgtgattagtgctcaccccatccattcgcttgatagccatcac
caccattatcacctgggcagcctggcctccccgaaccgcagctatctgcatcatgctagc
agccctaggcccatcgcctcttccatctctcatctagacagggccgactcttcagaatct
gggagaaacactcctcccagtacagacctgctgccagcctcagctcagccctcctgcagc
ctggaccactcagagaccgacatcagttaccacagctctgttgcagaggaggagcccagt
taccccccaacggcacacgtgcgccctacccaccctctcaagagctttgccgtgcctgct
gtgcccgcccacggccaagcctacgagggagtcgcactgcccagcacaccgctgctttcg
gctcctcactcggtcaaaacagcctccattgggacgctgagtaggacgaggacaccagtg
ccagtcaccgcacccaacataccggacgtgtcagatggcagcagaatgctggaggaatgc
gaaaataagtacgggaagtatgacaaggacgagctgtcggaggaaatggcccacctagag
ggcttaatgaaggacctgaacgccatcacgagctaa
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