Trichomycterus rosablanca: 134331289
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Entry
134331289 CDS
T09921
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
trn
Trichomycterus rosablanca
Pathway
trn04136
Autophagy - other
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134331289 (wipi2)
04136 Autophagy - other
134331289 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134331289 (wipi2)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134331289 (wipi2)
Membrane trafficking [BR:
trn04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
134331289 (wipi2)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134331289 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
BCAS3_WD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
134331289
NCBI-ProteinID:
XP_062868712
LinkDB
All DBs
Position
2:22860940..22873190
Genome browser
AA seq
425 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVCICSLAFSM
EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAQVSEMFTQGR
AFATVRLPFSGHKNICALAVIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLDGS
AEPANEILEQTAHERPLVAQTYSAAVAKGYSEDQGAVGGAGVEEDMNALHLDEENEQPPL
ILETD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgctaacttt
aaccaggataacacgtccttagcagttgggactaaatctggatacaagttcttctctttg
tcatcagttgacaaattggagcagatttatgaatgtactgacactgaagatgtgtgcatt
gtggaaagacttttttccagtagccttgtcgctatcgttagccttaaggcacccaggaag
ctcaaagtgtgtcacttcaagaaagggactgagatatgtaactacagctactcaaacact
atactggctgtaaaactaaacagacagagattaatagtatgtctggaggaatcattatat
atccacaacatcagagatatgaaagtactgcatacaattcgggagacgcctccaaatcca
tcaggattatgtgcactctcaatcagcaatgacaactgttacttggcatatccaggaagt
gcaacaataggagaagtgcaagtttttgacactgttaatctgagagctgctaatatgatt
cctgctcacgacagcccattagcagcactggcatttgatgcaagtggtacaaaacttgcc
acagcctctgaaaaggggactgtcatccgtgtgttctccattccagaaggtcagaagctc
tttgagtttaggagaggagtaaagagatgtgtgtgtatttgctctttggccttcagtatg
gagggactttatctgtctgcctctagcaacacagagacagttcatatctttaaactggag
acacagagagaaaaaccacaggaggagcccactacttggacaggatactttggaaaagta
ttgatggcctccaccacatacctacctgcgcaggtgtctgagatgtttacacaaggaagg
gccttcgctacagtcagactgccattttcaggacacaagaatatctgcgctctcgctgta
attcagaagattcccaggcttctggttgcagcagcagatggctacttgtacctgtacaac
ctagacccacaggagggaggagagtgcacactgatgaagcagcacaagttagatggaagt
gctgaacctgcaaatgaaatactagaacagacagcccatgagcggccgctcgtggcacag
acctacagcgctgctgttgccaaaggttactctgaagatcagggggcagtggggggagct
ggtgtagaagaagacatgaatgcattgcatctggatgaggaaaatgagcagcctcctcta
atcctggagacagactga
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