Trichomycterus rosablanca: 134331295
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Entry
134331295 CDS
T09921
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134331295 (mex3b)
04121 Ubiquitin system [BR:
trn04121
]
134331295 (mex3b)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134331295 (mex3b)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134331295 (mex3b)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134331295 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
zf-RING_2
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4
KH_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
134331295
NCBI-ProteinID:
XP_062868715
LinkDB
All DBs
Position
17:30130442..30137433
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AA seq
531 aa
AA seq
DB search
MPSSLFPELERNGSSSSGSSSSGSGSSSQGVDALDEQRALHIALGQLTLLGLDGDESPVC
DNEPRRKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTG
RREDVAMARREIISAAEHFSMIRASRNKNSSVNGSAAVPGPPNLPGQTTIQVRVPYRVVG
LVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRARDEIEAHIAVRTGAGL
IEFASATDDNDFHANGTDVGFEMHASGAAHSSLWGKSSASASATPSLARKPFASYRNDSS
SSLGSASTDSYFGTNYSPPSPALSYNNNNNNNNLNSSFVYGEMLSPDCADLAFDSAPGFD
PAPGLLWSQYERSLNAATSSFPSSASANANANSALANQRRASGISQPRLSPPLNHVGGVS
DHPLARRVRSDPGGGSLTFPGYASISVHLPGLPSDSSASSSSSSSSSSSSGTSRKGSRDC
SVCFESEVIAALVPCGHNLFCMECANRICERSDPECPVCRVAVTQAIRIFS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgccgagctccctgttccccgagctggagaggaacggcagcagcagcagtggcagcagc
agcagcggcagtggcagcagcagtcagggggttgacgccctggacgagcagagagccctg
cacatcgccctgggtcagctcaccctgctcggtctggacggggatgagagcccggtgtgc
gacaacgagccccggaggaagagcgtcaacatgaccgagtgtgtgcccgtgcccagctcc
gagcatgtggccgagatagtgggcagacaaggttgcaagatcaaagccctgcgtgccaag
accaacacctacatcaagaccccggttcgaggggaggagcctgtgttcgtggtcaccggg
aggcgggaggacgtggccatggctcggcgggagatcatctcggcggcggagcacttctcc
atgatccgggcgtcccggaacaaaaacagcagcgtgaacgggagcgcggcggtgcccggg
ccgcccaacctcccggggcagaccaccatccaggtgcgggtgccgtaccgcgtcgtggga
ctggtggtgggtccgaagggcgcgaccatcaagcgcatccagcagcagacgcacacctac
atcgtcacgccgagccgcgacaaggagccggtgttcgaggtgacgggcatgccggagaac
gtggaccgggcgcgggacgagatcgaggcgcacatcgccgtccgcacgggcgccgggctg
atcgaattcgccagcgccaccgatgacaacgacttccacgccaacgggacggacgtgggc
ttcgagatgcacgcttccggcgccgcccactccagcttgtggggcaagagcagcgccagt
gccagcgcgactcccagtttggcgcgcaaacccttcgccagctaccgcaacgatagctcc
agctcgctgggcagcgcgtccacagattcctacttcggcaccaattacagcccgccgagc
cccgccctcagctacaacaacaataacaacaacaacaacctgaacagctcctttgtttac
ggtgagatgctgtcgcccgattgcgccgacctcgctttcgactcggcgcccggattcgac
ccggcgcccggtttgctctggtcgcagtacgagcgcagcctgaacgccgctacttcaagc
ttcccgtccagcgcttccgccaacgctaacgccaactcggccctcgccaatcagaggcgg
gcgagcggaatcagccagcctcgcttaagcccgcctcttaatcatgtgggcggagtcagc
gatcacccgctagcccggagggtccggagcgacccgggcggcggatccctgaccttcccg
ggctacgctagcatttccgtgcatcttcccggtctgccctccgattcgtccgcatcttcc
tcgtcctcgtcgtcctcgtcttcttcctcggggacgagccggaagggcagccgggattgt
tcggtgtgcttcgagagcgaggtgatcgccgccctggtgccgtgcggtcacaacctgttc
tgcatggagtgcgccaaccggatctgcgagcgcagcgaccccgagtgccccgtgtgccgc
gtcgcagtcactcaggcaatacgtatattctcctaa
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