Trichomycterus rosablanca: 134331300
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Entry
134331300 CDS
T09921
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134331300 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134331300 (exosc6)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134331300 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
134331300
NCBI-ProteinID:
XP_062868720
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Position
17:16573894..16575049
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AA seq
271 aa
AA seq
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MPVDTKRVRGPELSQSPLLFLPASAQISEVSSRKGDRGNADVRSVFARCGLVSQAKGSAY
LEAGNTKIVCAVYGPRETERKDDTDMKCGRLVCDFRLAPFSSPKRGAWIQGNEERDLSLS
LLESMQPGVCLHRYPRSQIEVNVMVLENDGSVLSHAVTCASMALVDAGIEMYDMVLGCAL
RQNSDSFFLDPDLSEDQGNWQTGYNEQQGRVTVALLPNLNQISGLHAEGEMREDTLTAAV
TTCVEGCHKLYPVVQQAILRAVKRKAPPSEK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggataccaaacgagtccgtggacctgagttatctcagtctccgttgttattt
cttcctgcgagcgcacaaattagcgaagtaagcagcaggaaaggggatcggggtaacgcc
gatgttcggtcagtgttcgcgcgctgtgggctggtgagccaggctaaaggctctgcctac
cttgaggccggcaatacaaagatcgtgtgtgcagtgtacggtccgcgagaaaccgagcgc
aaagacgatactgacatgaagtgcggccgcctcgtgtgcgatttcagacttgcgccgttc
tctagcccgaagcgcggcgcgtggatccagggcaacgaagaacgggatttgtccttatcg
ttgctggagagcatgcagcccggtgtttgcctgcaccgttacccgcgttctcaaatcgag
gtcaacgttatggtgctggaaaacgacggctcggtcctgtcgcatgcagtcacttgcgct
tccatggcattggtggacgccggtatcgagatgtacgacatggtgctgggctgcgcgtta
agacagaacagtgattcgttcttcttggaccccgatttatcggaggaccaaggaaactgg
cagacaggttacaatgaacaacagggacgtgttacggtggcacttctcccgaacctcaac
caaatttctggtcttcatgcggaaggcgagatgcgagaggacacgctgactgctgcagtg
acaacctgcgtcgagggatgccataaactatacccggtggtacaacaagctatcctgcgc
gctgttaagagaaaagcaccaccatctgagaaatga
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