Trichomycterus rosablanca: 134331310
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Entry
134331310 CDS
T09921
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
trn
Trichomycterus rosablanca
Pathway
trn04144
Endocytosis
trn04517
IgSF CAM signaling
trn04530
Tight junction
trn04810
Regulation of actin cytoskeleton
trn05100
Bacterial invasion of epithelial cells
trn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134331310 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134331310 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
134331310 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134331310 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134331310 (arpc1a)
05100 Bacterial invasion of epithelial cells
134331310 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134331310 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134331310 (arpc1a)
Membrane trafficking [BR:
trn04131
]
Others
Actin-binding proteins
Arp2/3 complex
134331310 (arpc1a)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
134331310 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
Rax2
EIF3I
Beta-prop_EML
RMC1_N
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
134331310
NCBI-ProteinID:
XP_062868735
LinkDB
All DBs
Position
2:complement(22888668..22895244)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
APTPWGSKMPFGQVMSEFGGAGSGGWVHSVSFSGSGNRLAWVSHDSTVTVADPTKSSMPS
SLKTEFLALLSVIFVSENSIVAAGHDCCPMLFRLDDGGTLTFISKLDVPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSMYEGDKKDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccaccagtttctacttgaacccatcacatgccatgcatggaaccgggacagg
actcaaattgctatcagtccaaacaaccacgaggtccatatatacaaaaagagtggaaac
cagtgggtcaaaacccatgagttgaaagaacacaatggacacattacaggcattgactgg
gctcctaaaagtgatcgtattgtaacctgtggagcggatcgcaatgcttatgtgtggagc
cagaaggacggcgtgtggaagcccactcttgtcatcctcaggattaaccgtgctgccacg
tttgtcaagtggtctccattggagaacaagtttgcagtgggcagtggtgctcgcctcata
tccgtttgctactttgagtctgaaaatgactggtgggtgagcaaacacatcaaaaagcct
atccgctctaccgtcctcagtttagactggcatccaaacaatgtgcttctggcagctgga
tcatgtgactttaaatgcagggtattttctgcttacatcaaggaggtggatgagaagccg
gctccaactccgtgggggtccaagatgccttttggccaagtgatgtcagagtttggtgga
gcagggagtggaggatgggtccacagtgtcagtttctctggcagtggtaatagactggcc
tgggtcagtcatgacagcactgtgacagtggcagaccccacgaaaagctcaatgccaagt
tcactgaagacagaattccttgctcttttgagtgtgatctttgtttctgagaacagcatt
gtggcagcgggtcatgattgctgcccaatgctgttccgtttagatgacggtggaacattg
actttcatttccaagttggacgttccaaagcaaagcatccagcggaacatctctgccatg
gagcgcttccgcaacatggacaagagagccacaactgaggatcgcaatagtactctggag
acgcttcaccagaacagcatcacccaagtgtctatgtatgaaggagataaaaaagattgt
cgcaaattctgcactacaggaattgatggtgcaatgaccatatgggatttcaagacttta
gagtcttctatccaaggcctgcggatcatgtaa
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