Trichomycterus rosablanca: 134331319
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Entry
134331319 CDS
T09921
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04120
Ubiquitin mediated proteolysis
trn04137
Mitophagy - animal
trn04144
Endocytosis
trn04340
Hedgehog signaling pathway
trn04350
TGF-beta signaling pathway
trn04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134331319 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134331319 (smurf1)
04350 TGF-beta signaling pathway
134331319 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134331319 (smurf1)
04137 Mitophagy - animal
134331319 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
134331319 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134331319 (smurf1)
04121 Ubiquitin system [BR:
trn04121
]
134331319 (smurf1)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134331319 (smurf1)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134331319 (smurf1)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134331319 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
134331319 (smurf1)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
HECT type E3
134331319 (smurf1)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134331319 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
134331319
NCBI-ProteinID:
XP_062868747
LinkDB
All DBs
Position
2:22920432..22964303
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPATRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNASDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLLENEGPVFEDSGPGRPLSCFMEEPL
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQESRNHSHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRNLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQQSQVKESSQALPVQMDVPVEEGEGELPLRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLSDLETVDPELHKSLVWILENDITSVLDHTFCVEHSAFGKFL
QHELKPNGRNIPVTEENKREYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDHK
ELELIIGGLGKIDLNDWKANTRLKHCVADSSIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgcgactcgaagaaacgggtcaagcatcaaaatcagactgacagtgtta
tgtgccaagaaccttgccaagaaagactttttcaggttgcctgacccttttgccaaagtt
gttgttgatggctcgggccagtgtcactccacagacacagtcaagagcacattggacccc
aaatggaaccagcattatgacctttacatcgggaaaacggactcaattactattagcgtt
tggaaccataagaagatccataagaagcagggtgctgggttcctgggctgtgtaaggctt
ctgtccaatgccatcagcagacttaaagatacgggctaccaacggttagatttatgcaag
ctgaacgcctctgacagtgatgctgttcggggtcaaattgttgtgagcctccagaccaga
gacagaattggcagtggtgggcctgtggtggactgccgtggactgttagaaaatgaaggg
ccagtattcgaggactcgggaccagggcggcctctcagctgtttcatggaggagcctttg
ccctacacagaccccacgggagctgctggtgggggcaactgccgtgccctggagtcaccc
aatcaggagcagagactccaagcacagcgaattcgaaaccaggagtccagaaatcactca
cacactccacagaaccggccacatggacaccagtcacccgacctccctgaaggctatgag
caaaggaccactgtgcagggtcaggtctactttctgcacacccagactggcgttagcact
tggcatgaccccagaataccacggaatttaaacagtgtaagctgtgaggaactgggccct
ctgccaccaggctgggagatcagaagcacagtgtcaggaaggatttattttgttgaccac
aataacagaaccacacaattcacagaccccaggttacaccacatcatgagccagcagtct
caggtgaaggagtcgagtcaggctctgccggttcagatggatgttcctgtggaggaaggg
gaaggagagctgcctttgcgttatgagcgagatctggtccaaaagctcaaggtgctacgg
cacgagctctcactccagcagccacaggctggccactgccgcatagaggtgtcccgcgag
gaaatctttgaagagtcttaccggcagatcatgaagatgaggccaaaagacctaaaaaag
aggcttatggttaaattccgtggagaagagggcttggattatggtggagtggcaagggag
tggttgtacctgctttgtcatgagatgcttaatccgtactatggcctgttccaatactcc
acagataacatctacacactacagatcaaccctgactcatccatcaatcctgaccacttg
tcatatttccactttgtggggaggattatgggcctggctgtgtttcacgggcactacatc
aatggcggcttcacactgcctttctacaagcagcttctcgggaaacccatccagctttct
gacctggagacagttgatcctgagcttcacaagagccttgtctggatcctagaaaatgac
atcacgtcagtcttggatcataccttctgcgtagaacacagtgcttttggcaaattcctc
cagcatgaacttaagcccaacggcagaaatattccagtgactgaagagaacaagagggag
tatgtgaggctttatgtgaactggaggttcatgcgaggaattgaagctcagtttctcgct
ctgcagaagggctttaacgagctcattccacaacaccttcttaagccgttcgaccacaag
gagcttgagctgattatcggcggtcttgggaagattgatttgaatgactggaaggccaac
acgcggctaaagcactgtgtggccgacagtagcatagtgaagtggttctggcaggccgtg
gagtcgtttgatgaggagaggaggggcagactgcttcagttcgtcactggctccacacgt
gtccctcttcaaggctttaaagcactgcaaggctctacaggttctgcaggaccaagactc
tttactatccacttgattgatgccaacacggataatttgcccaaagcccatacatgcttc
aaccgcatcgacatcccgccctacgagtcatatgagaagctctatgagaagctcctgact
gccgtggaggagacctgtggctttgctgtggagtga
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