Trichomycterus rosablanca: 134331392
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Entry
134331392 CDS
T09921
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00260
Glycine, serine and threonine metabolism
trn00630
Glyoxylate and dicarboxylate metabolism
trn00670
One carbon pool by folate
trn01100
Metabolic pathways
trn01200
Carbon metabolism
trn01230
Biosynthesis of amino acids
trn01240
Biosynthesis of cofactors
trn04981
Folate transport and metabolism
Module
trn_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
134331392 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134331392 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134331392 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134331392 (shmt1)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
134331392 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
SHCBP_N
HBM
Motif
Other DBs
NCBI-GeneID:
134331392
NCBI-ProteinID:
XP_062868856
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Position
2:23322543..23333294
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AA seq
479 aa
AA seq
DB search
MAHIVDNDTWESHNSMMKEPLGTNDPEVFEIIKKEKKRQTCGLELIASENFTSRAVLEAL
GSCMNNKYSEGYPGQRYYGGTEHVDELERLCQQRALKAYGLDPQKWGVNVQPYSGSPANF
AVYTAVVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSMFFESMPYKVNQETGYIDYDR
LEENARLFHPKLIIAGTSCHSRNLDYSRLRKIADENGAFLLSDMAHISGLVAAGVVPSPF
EHSDIVSTTTHKTLRGCRAGVIFYRKGVRSVDAKTGKETLYNLESLINQAVFPGLQGGPH
NHAIAGVAVALKQAMTPEFKAYQLQVLANCKALAAALMEKGYKIVTGGSDNHLILLDLRP
NGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGLVEEDFRLVAEFI
HRCIQLTVKIQTDMNAKATLKEFKETLAQAEKYQNKIKEIKDEVEAFAGKFPMPGLPEL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatcgttgacaacgatacatgggagtcacacaacagtatgatgaaggagcct
ctcggcaccaatgatcctgaggtatttgaaataattaagaaggagaagaaaagacagaca
tgtggtttggaactcattgcctctgagaacttcaccagtcgagctgttctggaggctctg
ggctcgtgcatgaacaacaaatattccgaaggatatcctggacaaagatattatggtggt
acggaacatgtggatgagctagagcgtctgtgtcagcaaagagcattaaaggcttatggc
cttgacccacaaaaatggggagtgaatgtgcagccctattcagggtcacctgccaacttt
gctgtgtacacagcagtagtggagcctcatgggaggatcatgggtctcgatctgcctgac
ggaggccacctgacccatggctttatgacagacaagaaaaaaatctctgccacctctatg
tttttcgaatcaatgccatacaaggttaatcaagagactggttatattgattatgaccga
ctagaggaaaatgctcgtttgttccatccgaaattaatcatcgcaggaaccagttgccat
tcccgcaaccttgattacagtcgcctgcggaagatagcagatgagaacggggccttcctc
ctgtctgacatggcacacattagtggtcttgttgcagctggggtggttccatcccctttt
gaacacagtgatattgtttccacaaccacacacaagacccttagaggctgcagagcagga
gtcatcttttataggaaaggggtgcgcagtgtggatgcaaagaccggaaaggagactctt
tataacctggagagtttgatcaatcaggctgtgtttcctgggctacagggaggacctcac
aaccatgccattgcaggagtggctgtagcactgaaacaggccatgactcctgaattcaaa
gcctatcagctacaagtgctggcaaactgcaaggccttggcagctgctctgatggaaaag
ggctacaaaattgttaccggaggttctgataatcatcttattttgcttgatctgcgtccg
aacgggactgatggtggaagggcagagaaggtgctggaggcctgcgccattgcctgtaac
aagaacacctgccctggtgacaagagtgcactgcgccccagtggcctccggttcggctct
cctgcactgacatcgcgagggctagtggaggaagatttccgcctggttgcagaattcatt
caccgctgcattcagttgactgtgaagatacagacagacatgaacgccaaagccactctg
aaggagttcaaagaaaccttggctcaggctgagaaatatcaaaataaaataaaagaaatt
aaggatgaagttgaggcttttgctggaaagttccccatgcctggactgccggagctataa
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