Trichomycterus rosablanca: 134331397
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Entry
134331397 CDS
T09921
Symbol
cherp
Name
(RefSeq) calcium homeostasis endoplasmic reticulum protein isoform X1
KO
K12841
calcium homeostasis endoplasmic reticulum protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134331397 (cherp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134331397 (cherp)
Spliceosome [BR:
trn03041
]
Complex A
U2 snRNP components
U2 related factors
134331397 (cherp)
Complex B
134331397 (cherp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7819
CID
Surp
G-patch
G-patch_2
RSRP
Motif
Other DBs
NCBI-GeneID:
134331397
NCBI-ProteinID:
XP_062868860
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All DBs
Position
17:1913975..1928773
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AA seq
910 aa
AA seq
DB search
MDILAPPEDQELRNVIDKLAQFVARNGPEFEKMTMEKQKENLKFSFLFGGDYFGYYKYKL
AIEQQQHPSTHLDEVLHMPSGNEIPDVPPPMATIPPTIPSSTTSVEELIQQSQWSLQQQE
QHMHSLRQKQINEAIAVAMEEQMQKLLVETQLDTAEFDSLLQPIIDTCTKDAISAGKNWM
FNNAKSPPHCELMTSHLRNRITAETAHFELRLHLIYLMNDVLHHCQRKNQRDLLAALQKV
VVPIYCTSFLAVEEDKQQKISRLLQLWEKNGYFDEVTIQQLQSPALGLAQYQASLVMEHA
AVVQPVQVAIQQQIQTLKTQHEEFVANLKQQQQQQQQQSVAAAAVTQLPPSEPEVKGVSQ
SAMTAQAADAKPPMTGPPPGDYDGPQSRPDSNPSAMSDVPPGKPGWFDGQHGMPGWNPQH
PPPFDPNQGPPPCPPWNSHEGMWNEQEPNWSSPRDGGPGGPWGNQSEPPPSWSGQYDQPP
WSNQPDQPPWGHREPPFRMQRPPHFRGPFPPHQQPPPFNQPPPPHNFNRYPPRFMQDDFP
PRHHFDRPPFPPQRFDYQHGDYHGDMGPPPHHHPDQMIPPPGMGEHPPWGGNQHPDFGPP
PHGFNGQSHPMRRQNPTHVNQDDPSLVPNVPYFDLPAGLMAPLVKLEGHDYKPLDSKDIR
LPPPMPPSDRLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRKKDHDKRNST
RGSRSRSRSRSRGRSSSRSSSRSYKSSRSRSSRSRSRSYSRSRSRSGSRSRSKSRSRSRS
KSRSKSRSPDQRQHAAKSCSPTPLATSGLGSGPSAPVVDQRLGEENKGHQMLMKMGWSGS
GGLGAKEQGIQDPIKGGDIRDKWDQFKGVGVSLDDPYVNYRRNKSYNFVARMKAREKGEV
PVSAVQNSQT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatattctggctcctcctgaagaccaagagcttcgcaatgtcatcgacaagctggcg
cagtttgtggcccgcaacggccccgagttcgaaaagatgaccatggagaagcagaaggag
aatctgaaattttcatttctcttcggaggggactacttcggatactacaagtacaagctg
gccatcgagcagcagcagcatccttccactcatctcgacgaagtgctgcatatgccgtcg
ggtaatgagattcctgatgttccacccccgatggccacgattcctccgacgattccctcc
agcactacgtcggtggaggagctcattcagcagagtcagtggagcctgcagcagcaggag
cagcacatgcacagcctcagacagaagcagattaatgaagctattgccgtggccatggag
gagcagatgcagaagctgctggttgaaactcagctggacacggcagaattcgacagcctt
cttcagcccatcatagacacctgcaccaaggacgccatctcggccgggaagaactggatg
ttcaataacgccaagtcaccaccacactgcgagctgatgacctcacacctccgcaaccgc
atcaccgcggagacggcgcatttcgagctgcgcctgcacctcatttatctcatgaacgac
gttctgcaccactgccagaggaagaaccagagggatctgctggctgcacttcagaaggtg
gtggtgcccatctactgcaccagctttctggctgtcgaggaagacaagcagcagaaaatc
tctcggttgctccagttatgggagaaaaacggctacttcgacgaggtgaccatccagcag
ctccagagtccggccctcggtctggcgcagtatcaggcctcgttggttatggagcacgcc
gctgtcgtgcagcctgtccaagtagccattcaacagcagatccagacgctgaaaactcag
cacgaggagttcgtggccaacctgaagcagcagcagcagcagcagcagcagcagagtgtt
gcggccgctgccgtgacccagctgccaccatcagaacctgaagttaaaggagtgagccag
agtgctatgaccgctcaggccgcagatgcgaagcctccaatgacgggccctccacccggt
gactatgatggtcctcagtcgaggccggactccaatccctccgccatgtccgacgttccc
ccaggcaagcccggctggttcgacggtcagcacggcatgccgggctggaacccacagcac
ccacctccgttcgacccgaatcaaggaccccctccttgtccgccctggaacagtcacgag
gggatgtggaacgaacaggaaccgaactggagcagccctagagacggcggccccgggggc
ccgtggggcaaccagagcgagcccccgccgtcctggagcgggcagtacgatcagccgccc
tggagcaaccagcccgatcagccgccgtggggccacagggagccgcctttccgcatgcag
cgccccccgcatttccgtggccctttccctccccaccagcagccaccgccgttcaaccag
cccccccctccgcacaacttcaaccgctacccgccacgcttcatgcaggacgatttcccg
cccagacatcacttcgatcgcccgccgttcccgccgcagcggtttgactaccagcacggg
gactaccatggagacatgggcccacccccacatcaccacccagatcagatgattcctcca
ccaggaatgggtgagcatcctccatgggggggtaaccagcaccctgacttcgggcccccg
ccgcacggcttcaacggccagtctcaccctatgagacggcagaatcccacacatgtgaac
caggacgacccgagtctggtgcccaacgtcccttatttcgacctgcccgcgggtctcatg
gctcctctggtaaagttggagggtcatgactacaagcctcttgactctaaagacatccgg
cttccaccccctatgcctcctagcgatcgattgctggctgctgtcgaggcgttctacagt
ccgccctcccacgacagaccgagaaacagcgagggctgggagcagaacggtctgtacgaa
ttcttcagagccaagatgagggcgcggaggaaaaaggaccacgacaaacgtaacagcacg
cgaggcagccgttcccgtagccgctcacgcagccgaggcaggtcgtcgtcacgctccagc
tctcgctcctataaatcgtcccgctccaggtcttccaggtcccgatcccgctcctactcc
agatcccgctccaggagcgggagccgctccagatcgaagtccagaagccgctcgcgttcc
aaatcacgctccaagtcgcgctcgcccgaccagagacaacacgccgcgaagtcctgcagc
cccacaccactggcgacttctggtctgggttcaggtccttcggctccagtcgtcgatcag
aggttgggagaggaaaacaagggccatcagatgctcatgaagatgggatggagcggttct
ggaggactcggagctaaagagcaaggaattcaggatcccattaagggaggcgacatccgg
gataagtgggatcagttcaagggtgttggggtttccctggatgatccgtacgtcaactat
aggcggaataaaagctacaactttgtagcgcggatgaaagcccgagagaaaggtgaagtc
cctgtttctgctgttcaaaatagccaaacgtga
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