Trichomycterus rosablanca: 134331424
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Entry
134331424 CDS
T09921
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134331424 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134331424 (sptbn1)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134331424 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
134331424 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CENP-K
PH_11
PMC2NT
SOS1_NGEF_PH
UBA_9
Motif
Other DBs
NCBI-GeneID:
134331424
NCBI-ProteinID:
XP_062868899
LinkDB
All DBs
Position
17:7257365..7334056
Genome browser
AA seq
2349 aa
AA seq
DB search
MTTVAAEFEHMEIQQQYQDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDIVDFDKLKKSNVHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDYAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLTGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRITARKDNVLRLWYYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVRAVNANAQKYAIDDEGY
KPCDPQVIRDRVAHLEFCYQELTQLAAERRARLEESRRLWKFIWEMAEEEGWIREKEQIL
SSDDVGKDLTGAVRLLSKHRALEDEMSGRAGHLQHTVREGLDMADAGHSGAAKIRERVDD
VQAQWTALEKLAAVRKARLEEACSLHQFQTDADDVDAWTLDALRIVSSDDVGHDEFSTQA
LVKKHKDAAAEVASYRPVIDALHEQAQALSPELAQSADVNVRLAGIEERYKELSELTKLR
KQALQDALARYKMFSEADACEVWIDEKELWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLSDLQGEAER
LAAEHPEQAKAITDRLAEIGTVWEEMKDTLHNREASLGEASKLQQFLRQLDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLGQHEGIKHEIDNYEEDYQKMRDMGEMVTQGQTDAQHMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAETFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINAERIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKLLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGKQLVSEKPETEAVVQEKMAVLQKLWLVLESTTQTKAQCLFDANK
AELFTQSCTDLDKWLAGLEGQITSDDYGKDLTSVSILLKKQQILENQVEVRKREVEELQS
QAHVLRQEGKDTDEVDGRREVVEKKFQELLEPICKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSKSIVTDDSQNVDS
IKARLDELQALWKLLIQETEKRHERLEEAHQAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVADNHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDSVNRMADDLINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQILA
ASFELHKFYHDVKEILSRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQSAYAGDKADDIQRRESEVLDAWRNLLEACEGRRSRLLDTGDKFRFFSMVRD
LMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REVGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKPQT
PEPAEEIEAQRREGEQIAQNGLPSDQESPREVVDGEIVNGVPERSSKEASPIPSPTSGRR
AKGSQSSTLPAKSQDSPSAQLEGILHRKHELEGHNKKASNRSWHNVYCVINNQEMGFYKD
NKNAGQGIPYHNEIPVSLRDAVCEVAVDYKKKKHVFKLRVTNGNEYLFQAKDDEEMNTWM
QAIQNAVSGSSPSDKSEVTPSNQSTPVSSRANTLPANVTLVTESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagctgcagaattcgaacacatggagatccagcagcagtaccaggatact
gtgaacaaccgctgggatgaggagtgggacaacgagaacagctcagcccgcctgttcgag
cgctcacgcattaaggccttagcagatgagcgtgaggcagtgcagaagaagaccttcacc
aaatgggtcaactcccacctggctcgagtctcctgccgtattacggacctgtacatggac
ctgcgggatggacgtatgctcatcaagctcctggaggtcctgtctggagagagactgccc
aaacccacaaagggcagaatgagaattcactgtctagagaatgttgacaaagctctgcag
ttcctcaaagagcagcgggttcacctggaaaacatgggctcccacgacatcgtcgacggc
aaccaccgcctcacgctcggtcttatctggaccatcatcctccgcttccagatccaggac
atcagtgttgagacagaagacaataaagagaagcgctcggctaaagacgctctgctgctg
tggtgtcagatgaagaccgcaggctatccaaacgtcaacatccacaacttcaccaccagc
tggcgtgacggaatggctttcaacgccctcattcacaaacacaggccagacattgttgac
tttgacaagctgaagaagtccaacgttcactataacctgcagaatgccttcaatctggcc
gagcagcacctgggactcaccaaactgctcgatcctgaggatatcagcgtagatcatcct
gacgagaagtccgtcatcacctatgtcgtcacatactaccactatttctctaagatgaaa
gccctgaaagtggaaggcaagcgtattgggaaagtgcttgattatgccattgaaacagaa
aagatgattgagaaatacgagtcgctagcctccgacctgctggagtggattgagcagacg
atcatcatcctgaacaaccgcaagtttgctaattctctgacgggagtccagcagcagctc
caggccttcaacacctaccgcactgttgagaaacctcctaagtttactgaaaagggtaat
ttggaagtcctactgttcacgattcagagcaagatgagagccaacaaccaaaaagtgtac
atgcccagagagggcaagctaatctctgacatcaacaaggcctgggagcgcctggagaag
gccgagcacgagcgagagttggctttaagaaccgagctaattcgccaagagaagctggaa
cagctggcacgtcgcttcgaccgcaaagctgccatgagagagacctggctcagtgaaaac
cagcgtcttgtctcgcaggacaactttggctttgaccttcaggcagtggaagcagccacc
aagaagcacgaggccatcgagacagacatcgctgcatatgaggagcgcgtgcaggccgtt
gtagccgtggctaaagagctagaggcggagaactaccacgacatcaagcgcatcacggca
cgcaaggacaatgtactgcgcctgtggtactacctactggaacttctcaaagcacgtaga
caaaggctggagatgaacctgggactgcagcgtgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgttgtctcaggattatggaaaacatttgctg
ggagtggaagatcttctgcagaagcacgcgctggtggaggctgatattggcatccaagct
gaccgagtccgtgctgtcaatgctaacgcccaaaaatatgccatcgatgacgagggctac
aagccatgcgacccacaggtcatccgtgaccgtgttgcccacctggaattctgctaccag
gagttgactcagctggcggccgagcgccgtgctcgcctggaggaatcacgccgcctctgg
aagttcatctgggagatggccgaggaagaaggctggatccgtgagaaggagcagatcctg
tcgtcagatgatgtcggaaaggacctaaccggggccgtgcggctgctgagcaagcaccgg
gcactcgaggacgaaatgagcggacgtgccgggcacctgcagcacacggtgcgtgagggc
ctggacatggccgatgccggtcactcgggcgccgctaagatccgcgagcgtgtggatgac
gtgcaggcgcaatggacagcgctggaaaagctggccgccgtcaggaaggcgcgtctcgag
gaggcctgcagcctgcaccagttccagaccgatgctgacgacgtggatgcctggactctg
gatgccctgcgcatcgtctcgagcgacgacgtcggtcacgacgagttctccacgcaggcg
ctggtcaagaaacacaaggatgctgcggccgaggtggccagctaccggcccgtgatcgat
gcgctgcatgaacaggctcaggctctgtctccagagcttgcgcagtcggctgacgtgaac
gtacgcctggcgggcattgaggagcgctataaggagctgtcagagctgaccaagctgagg
aagcaagccctgcaggatgcactggcacgctataagatgttcagcgaggcggatgcctgt
gaggtgtggattgatgagaaggagctgtggctcaacagcatggagatccctgagaaactg
gaggacctggaggtcattcagcacaggttcgagagtctggagcctgagatgaataaccag
gcatcccgtgtggctgtggtcaatcagatagcccgtcagctgatgcatagcggacacccc
agtgaaaaggacatcaaggcccagcaggacaaactgaacaccagatggagccagttccgt
gatctggtggaccaaaagaaagagtctcttaactcagccctgggtgtgcagaactaccac
ctagactgcaacgagaccaaatcttggatccgcgagaagaccaaagtgatcgagtccacc
caggaacttggaaacgacctgacaggtgtcatggccctgcagcgcaagctgaccggcatg
gagcgtgatctggccgccatcgaggccaagctgagcgacctgcagggcgaggccgagcgt
ctggcggccgagcatcccgagcaggccaaggccatcacagacagactggctgaaataggc
acggtctgggaagagatgaaggatacgctgcacaaccgtgaggcttctctcggcgaggcc
agcaagctgcagcagttcctccggcagctggatgacttccagtcgtggctgtctcgcaca
cagactgccattgcatctgaggacatgcccaacaccttggctgaggctgagaagcttcta
ggtcagcatgaaggcatcaaacacgagatcgataactatgaggaggactaccagaagatg
cgggacatgggtgagatggtgacccagggacagacagatgcccagcatatgttcttaagg
cagaggctgcaggcacttgacaccggctggaatgagctgcataagatgtgggagaaccga
cagaacctcctgtcccagtcgcacgcctaccagatcttcctcagggacaccaagcaggct
gagaccttcctaaacaatcaggagtacgtgctagcccacactgagatgcccaccactctg
gaaggtgcagaagctgctattaagaagcaagaagacttcatgaccactatggacgccaac
gaggagaagatcaatggtgtggtggaggctgggcgcagactggccagcgatggtaacatc
aacgctgaacgcattcaagagagagccacctccattgatgacagacataagaagaaccgt
gaggcagctgtggagctgctgatgagactgaaggataacagagaccttcaaaagctcctg
caggactgccaggagctgtctctgtggataaatgagaaaatgctgacggcacaggacatg
acatacgatgaagccaggaacctgcacagcaagtggctcaaacaccaggccttcatggct
gaactacagtccaacaaagagtggctggataagatcgagaaggaagggaagcagttggta
tcggagaaaccagagactgaggctgtagtacaggagaaaatggcggtgctgcagaaactc
tggctggtgctagaatccaccacacagactaaagcccagtgtctgtttgatgccaacaag
gccgagctgttcacacagagctgcactgatctcgacaagtggctggcaggtctggagggt
caaattacctccgatgactacggcaaagatctgaccagcgtcagcatcctgctgaagaaa
cagcagattctggagaaccaggtggaggtgcgtaagagggaagtggaagagctgcagtct
caggctcacgtgctgcgccaggagggtaaggacacggacgaggtggacggccgtcgtgag
gtggtagagaagaagttccaggagctgctggaacctatctgcaaaagaaagaacttcctc
atggcctccagagaaatccaccagttcaaccgggacgtcgaggacgagattctttgggtt
gaggagaggatgcccctcgcaacttcaacagaccatggtcacaacttacagactgttcag
cttctaattaagaagaaccaaaccttgcagaaggagatccagggccaccagccacgctgt
gatgacatttttgagcgcagtaagagcatcgtgacggatgacagccagaacgtagactcc
atcaaagcccgtctcgatgagctacaggctctctggaaacttctgatccaggagacagag
aagaggcatgagcgtctggaggaagcccaccaggctcagcagtactactttgatgcagca
gaggctgaggcttggatgagcgagcaggagctttatatgatgtctgaggaaaaggccaag
gatgagcagagctctgtggctatgctgaaaaaacaccagatcctggagcaggcagtggag
gactacgctgagactgtccaccagctctccaagaccagccgtggcctggttgctgacaat
cacccagaaagtgagaggatagggatgcgccagtcacaggtggataagctgtacgcagga
ctgaaggacttgtcggaagagaggcggggtaaactggacgagaggttcagactgttccag
ctgaatcgggaggtggatgatctggagcagtggatcgctgagagagaggtggtggctgga
tctcacgaactgggccaggactacgaacacgtaactatgctgcaggaacgtttccgtgag
tttgcccgtgacaccggaaatatcggacaggagcgcgtggattctgttaaccgaatggct
gacgatctcatcaatgctggccatggcgacgctgctaccgtggctgagtggaaggacggg
cttaacgaggcctgggccgatcttctggagctgattgacactcgtacacagatcctggct
gcttccttcgaactgcacaagttctaccatgacgtgaaggagattctgagccgcattctg
gacaaacacaagaagcttccggaggagctcggtcgggatcagaacaccgtggagacgctg
cagaggatgcacaccacattcgaacatgacattcaggctttaggaacacaggtaaggcag
ctacaggaagatgcggcacgcctgcagtcggcgtacgcaggtgataaagctgatgatatc
cagcgaagagaaagtgaagttctggatgcatggaggaaccttctggaagcctgcgagggg
cgaaggtcacgcctgctcgacactggagacaagttccgcttttttagcatggtgcgtgac
ctcatgctctggatggaggacgtcatccgcctgatcgaggctcaagagaaacccagggat
gtgtcctctgtggaactgctaatgaacaaccatcagggcatcaaggccgagatcgatgcc
cgtaatgacagctttacttcctgcatcgagctgggcaagtctctgctggcgcggaagcat
tatgcatctgaggagattaaagaaaagttgctacagttgacagataagaggaaagagatg
attgataagtgggaggacagatgggagtggctgagactgattttggaagtgcaccagttt
tcgagggacgcgggggtagccgaagcgtggttgctaggacaggagccgtatctgtcaagt
agagaagttggtcagagtgtggacgaggtcgagaaactgattaagagacatgaggcgttt
gagaagtcagcagctacctgggaggaacgtttctctgcactggagaggctgactacgttg
gagttactggaagtgagaagacagcaagaagaagaggagagaaggagaaaaccccaaaca
ccagagccggcggaggagattgaggctcagcggagagaaggagagcagattgcccagaac
ggactgccatcggaccaggaatcaccacgggaggtagtggatggagaaatagtgaacggc
gtgcctgaacgcagctctaaagaggcaagtcccatcccatcacccacctctggtagacgc
gctaagggcagccagtcatccaccctgccggccaaaagtcaagattcaccctcagcccag
ctggagggcatcctgcaccgcaagcatgagctggagggccacaacaaaaaggcctccaac
aggtcctggcataatgtgtactgtgtcatcaacaaccaggagatgggcttctacaaggac
aataagaatgccgggcagggcatcccgtaccataacgagatccccgtcagcctgagggac
gccgtctgtgaggtggctgtcgactacaagaagaagaagcatgtttttaaactgagagtg
acaaatggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatggatg
caggccattcagaatgcagtcagtggatcctccccatcagacaagtcagaagtcacacct
agcaaccagagcactcccgtctccagtcgcgctaacacactcccggcaaacgtcaccctg
gtgaccgagtccagcccgggcaagcgagagaaggacaaggagaaagacaaagagaagcgc
ttcagtctgtttagcaagaagaagcagtag
DBGET
integrated database retrieval system
