Trichomycterus rosablanca: 134331442
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Entry
134331442 CDS
T09921
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134331442 (hmg20b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
134331442 (hmg20b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
134331442
NCBI-ProteinID:
XP_062868936
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All DBs
Position
17:6074394..6078753
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AA seq
297 aa
AA seq
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MGGVKQEQTDGPTSKSYPHSDSTPEENSSQPVKKRGWPKGKKRKKVLPNGPKAPVTGYVR
FLNERREQIRALHPDLPFPEITKRLGAEWSRLAAHDKQRYLDEAEREKMQYARELKEYQK
SEAFLITNAKIQDKKIKKEELTSVIINANSSGSSHFKEFSSRFDVPIFTEEFLDQNKARE
AELRRLRKANVEFEEQNSILQKHIADMFSAKERLEAELGQDELRTQALHRHLQAIKQTLF
TSLASVPLPGTGETPLAGTLDSYLSRLSSSLESSPHEHRALLLKLQEVLAHLDSEKL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagtaaaacaagagcagaccgatggaccaacgtcaaaaagctatcctcattca
gactcgacaccagaagaaaacagttcacagcctgtgaaaaaacgtggctggcccaagggt
aaaaagagaaagaaggtcctacccaatggtcccaaggcaccagtaactgggtatgtgcgt
ttcctgaatgaaagacgagaacaaattcgtgccttacacccagaccttccttttcctgaa
atcaccaagagactcggggctgaatggagccgcctggcagcccatgacaagcagcgctat
ctggacgaagcagagcgggagaaaatgcagtatgcacgggagctgaaggagtaccaaaag
agcgaggcctttctcataacaaacgccaaaatccaagacaaaaaaattaagaaagaggag
ttaacatctgttattattaatgccaatagttcaggatcttcacattttaaagaattttcc
agcagatttgatgttcccatattcacagaagagttcttggaccagaacaaagcacgagaa
gctgagctgcggaggctgcggaaggctaacgtggagtttgaggaacagaacagcattctg
cagaagcacatagctgacatgttctctgccaaagagcggctggaggcagagctgggtcag
gatgagcttcgtactcaggctctgcaccgccacttgcaggctatcaaacagacgctgttt
accagcctagcctcagtacccctgccaggtacaggtgagacacccttggctggaactctt
gactcatatctgagtcgtctgagcagttcattagagagcagtcctcatgaacaccgtgct
cttttgctcaaactacaagaggttctggctcacctggacagtgagaaactttaa
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