Trichomycterus rosablanca: 134331484
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Entry
134331484 CDS
T09921
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134331484 (hps3)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
134331484 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
134331484
NCBI-ProteinID:
XP_062868995
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Position
17:26906315..26917738
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AA seq
1041 aa
AA seq
DB search
MVHVYNCHPFSSQRIVPTEQEPGLVCCGGGALFVLSAGGCKIDVFDPQGKQCPLICRFST
MGLVHSIVYSQIGDYLVTIEEKNGATYLRAYTNWRYQGAEKKRVGVRLLGHLMQGQALQG
TPKEQMEIVEIPLSEAPRCAACCPITGSLLVACSKSLVLFGLKRQSLSEQHDALDFERLL
IVNVPGWCPLQVALCGSYVALQTDLEVLVLKLENLEKERMTEHKHLHGSDMPSSNQNYSD
IKKEPPSPVEPDDFFVFPKHLEMLGDDAKDCGVSVSLERTGMETEGGNSSEVTYILYRRF
APDFFQGCSVEETRLHSLQLHPMYTGQQNASGETEKSEPSYIFCFFSLPNAGYVYSLKNT
VELISTYQYPENALQSVLCNKFLYVITRNALQCFSVRCSAVAARAEDPYIDTTMKACPPV
TMEVCALRIQLFIGLKALCCYGNQIVLLTAADVDSKAETERGTKKTIEPKEQKALTEIFL
VAGIDQTTSPVLERFLFRSFLSRKTSVSKVKEPSDAGHGWNLYVLSTVTTLQLYREMVEY
SKRYEQTNPLSQNCLHLLNEAHLLLLADLLCPSQSDSTDRSELQQAFQESCAQLGDCFSR
LDKRDSHLALPYYKMSGLSVTEVIERNVAMCRGTAVDYGKGFLFFLKHSLLEETMEVLSG
ETANTVLEIFSKAEPGQLPYVVSSSFMKNASPARAQAHLEQLELNGAPSVTLTLCKAAQA
LRLGDLNYYQQQMDRHAEMLQVYGFIEEPKLLVHGREKAVVPTQLAQHLHDTQDGLLVAA
VVALHENSKVKLEEAELFFRELCKASVEPQSVPQLLVDFWEALLVASSQETIIQELLFHL
TSVYIHRIIRRERSGIKALKTAEDLINSSSHYGMLYPWVSILTPLQFNITLDHQEDLQKL
QSLLCGPTLDVSSIMPLLEQLSDADNAGLSVHVLCATKLGQHSSAIEKLLDRCPQAIIPY
ANHELHDDKLALWWQKLFLELCERTRASSGQSVLIDALKETLVVVAMLLNPVELLDLLPD
DGTANFFLPHLLECSQKHLRT
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtgtacaactgccacccgttctcctctcaacggatcgtaccgacagaacag
gaacctggtctggtgtgctgtggcggcggagctctgtttgtcctgtcggctggaggatgt
aagatcgacgtgttcgatccgcaggggaaacaatgtcctcttatctgtcgcttctccact
atgggtttagtgcacagcattgtttacagccagatcggggactacctggttaccatcgag
gagaagaatggtgccacatatttaagggcctacactaactggcgttatcaaggggctgag
aagaagcgtgtgggcgttcgactccttggccacctcatgcaaggccaggcactacaaggc
acccctaaagagcaaatggagatagtagaaattcctctctcagaggcgccacgctgtgct
gcttgctgtcccataacaggttccctgctggtggcctgcagcaagagccttgtgctgttt
ggcttgaaacgtcagtcgctcagcgagcagcatgatgcgcttgattttgagcggcttctt
attgtaaatgtgcccggctggtgcccgctgcaggtggcactctgtggcagctatgtggcc
ctgcagacagatttggaggtgctagtgctaaagctggagaatctggagaaggaacgtatg
actgagcacaagcatctgcacggcagtgacatgccttcaagtaaccaaaattacagtgat
attaagaaggaaccaccgagccctgttgagcctgatgacttctttgtgttcccgaaacat
ctggagatgctgggagatgatgcaaaggactgtggggtctctgtgtctttggaaaggaca
ggaatggagacagagggaggcaacagcagtgaagttacctacatcctatacaggaggttt
gctccagatttcttccagggctgcagtgtagaggagacacgcttacactccttacagttg
catcccatgtacactggtcagcagaatgcaagcggtgagacagaaaagagcgagccatct
tacatcttctgttttttctctctgccgaatgccggttatgtgtacagtctaaagaacaca
gtggagctcatctccacctaccagtacccagagaacgctcttcagtctgtgctctgcaac
aagtttctctatgtcattactaggaatgctcttcagtgtttttctgtgaggtgcagcgct
gtggcggctcgagctgaggacccctacattgacaccacaatgaaggcctgtccccctgtc
actatggaagtgtgtgccctacggattcagctgttcattggactgaaggctctgtgctgt
tatgggaatcaaattgtgctgcttacagccgccgacgtggacagcaaagcagagactgaa
cgaggaactaaaaaaactattgaacctaaagagcagaaagcactgactgagattttccta
gtggcaggtatagatcaaacaaccagcccagttctggaaaggttcctgttcaggtccttc
ctatccaggaagacctctgtgtcaaaagttaaggaacccagtgatgctggccatggctgg
aacttgtatgttctgagcactgtgaccacactgcagctctacagagagatggtggagtac
agtaagcgctatgagcagaccaacccgctctctcaaaactgtctacacctgttaaatgaa
gctcatctgctcctcttggctgatctgctctgtccgagccagagcgactcgacagacaga
tctgagctccagcaagcctttcaggaaagctgtgcccagcttggagactgtttcagcagg
ttggataagcgagacagtcacttggctctcccgtactataagatgtctggcctgtctgtg
accgaggtgattgagaggaatgtggccatgtgccgaggcactgctgtggattacgggaaa
ggcttccttttcttccttaaacattcactcctcgaggaaaccatggaagtgctcagtgga
gagactgccaacacagtgctggagatcttcagtaaagccgagcccggtcagctcccatat
gtggtgagcagctcgtttatgaagaacgcgagtcctgcccgagctcaggcccatttggag
cagctagaactcaacggtgccccttcagttacactcacgctgtgcaaggctgcccaggcg
ctgcgtttaggagatcttaactactaccagcagcagatggaccgccatgctgagatgctg
caggtgtatggctttatagaagaacccaagctgcttgtgcatggcagagaaaaggcagtg
gtgcccactcagctggcacagcacctgcacgacacccaggatggtctgctggtggccgcc
gtggtggctctacatgagaacagcaaggtcaaactggaggaggccgaacttttcttcagg
gagttgtgtaaggccagcgtagaacctcagagtgttcctcagctgctagtagatttctgg
gaagccctgctggtggcctcatctcaggaaaccatcatccaggagctgctgttccacctc
acctctgtctacatccaccgcatcatacgcagagagcgctcggggattaaagctctcaaa
acagccgaggacctcatcaactccagctctcattatgggatgctgtacccctgggtgagc
atcctgactcctcttcagttcaacatcacgcttgatcaccaggaagatctgcagaaactt
cagtctctgctgtgtggtccgacgctggacgtgtcctccatcatgcctctgctggagcag
ctgtccgatgccgacaatgccggcctgagtgttcatgtgctctgtgctaccaaactcggc
cagcacagcagtgccatcgagaagctgctggaccgctgtcctcaggccatcatcccttat
gctaaccacgagctacacgatgacaaactggctctgtggtggcagaaactatttctggag
ctttgcgagaggacacgggcttcttctggacagagtgttttgattgatgcactgaaagag
actctggtagtggtggccatgctgctaaatccagtagagcttttggacctgttaccagat
gatgggactgcaaacttcttcctgcctcaccttctggaatgcagtcagaagcaccttcgt
acatga
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integrated database retrieval system
