Trichomycterus rosablanca: 134331528
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Entry
134331528 CDS
T09921
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134331528 (pcdh17)
Cell adhesion molecules [BR:
trn04515
]
Cadherins
Protocadherins
134331528 (pcdh17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
134331528
NCBI-ProteinID:
XP_062869058
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All DBs
Position
17:24544719..24642491
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AA seq
1124 aa
AA seq
DB search
MHLSVLLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAGLELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCKRNLKCQLSMEVFANDKEICMIKVDIQDINDNAP
SFLSDQIDIDISENAAPGTRFPLAAAYDPDTRENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVIDSNDNSPVFEQPSYVV
EIPENSPLGTVLIDLNATDPDEGVNGQVTYSLSFYGSDRIKELFSIDPKTGVIKIQGKID
YEENAIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPTIGFVAVRQGAVSEAASPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFRLEENSDNFYTVVTDRLLDREVKDEYNITIMAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIYVPRNVGVGHVITMVRAVDNDFGESGRLTYE
ITDGNEEHLFEIDSVTGEIRTAQPLWEEVSPVVELIIKVMDHGKPTLSAMAKLVVKAYSG
PLPEGEPRINAEHHSWDVSLPLIVTLSIISIMLLAAMIAVAVKCKRENKEIRTYNCRIAE
YSHPQLGKSKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPSANNLSVPQGHVGCHTSFTGPVTSTTETPVNRMSIIQTDNFSAEPNYMGS
RQQFVQSSSTFKDPERVSLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCINCTDECRVLGHSDRCWMPQFPTVGMAQAEGLDYRTNLFVPAGMEAVAAEPE
SYEATGCVSGKKTFCTFGKERREHAVLVANVKPYLKGKRALSPLLQEVPSASCSPTKGTK
GVADGAEGNPSTSHYEGPNGLYTSPGKQSREQGYCSQATSDPVAKVLLEARSRISQETAN
EPDGALDHGVGEPSRGGMDAEQVVRDIDKLLQDCRGSETTAVRK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgtctgttcttttattcctcctcttgtgggcgcaagccctgactttaaaaaac
ttgaactattccatacctgaggaaaaaattcagggtgtgatcggaaacatagccaaagat
gcagggctcgagctgggcgagcagggcaaaaaatccaacttcagggtactggagaactcg
gctccgcacctcatcgacgtggaccctgagagcggcctgctttacaccaagcagaggatt
gacagggaaacactgtgtaaaaggaaccttaagtgccagttatcaatggaagtctttgcc
aatgacaaggagatctgcatgatcaaagttgacatccaggacataaatgacaatgcgccc
agctttctttcagatcagattgacattgatatttcagagaacgctgccccaggtacacgc
tttcctcttgcagctgcctatgaccctgacactagggaaaatggcctaaaaacttatcaa
atcacaagagatgattacagcatattttctctggacgttaaatccagaggggacggaaca
aaatttccagaactggtcgtccagaggtctttagatagagaggaacgtagccatcatacc
ctaatcattactgccacagacggaggagaatatccgaagtcaggcacaatgcaaattaac
gttaaagtcattgattcgaatgataacagccctgtttttgagcagccctcctatgttgtt
gagattccagagaactctcctttgggcacagtcttgatagatttaaatgctactgaccct
gatgagggagttaatgggcaggttacctactctctaagcttctacggctcagacagaatt
aaagagctgttctcaatagaccccaaaacaggggtcataaagattcagggtaaaattgac
tatgaggaaaacgcaattatagaaattgatgtgcaggcaaaagatcaaggcccaaaccca
attcccggccattgtaaagtcaccgttaaagtgcttgacaggaatgacaattggccaaca
ataggatttgtggcagttaggcagggggccgttagtgaagcagcttccccagggacagtc
attgctttggtgagagtgactgacaaggactcaggacgcaatgggcaactccagtgtagg
attttaggcaacgtgccatttaggcttgaggagaactctgataatttctacacagtggtc
acagacaggctgctggatcgagaagtaaaggatgaatacaacattaccatcatggccaaa
gacaacggcaaccctccgctaaactccacaaagtcttttaccgtaaaaattttagacgag
aatgacaatgcacctcgattcacaaaaatggtgtatctgctacaggtacctgaaaacaac
atccctggagaatatcttggctcggttttggctcacgaccctgatttggggcaaaatggc
actgtttcatattctcttcttccatctaacgtgagtgaggaatccatcacgacgtacgtc
aatattaaaccgaccgatggagctatttatgcgctgaggagttttaattatgagcagacc
aagtattttgactttaaggttcaggctaaagattctggtaacccccacctagagagcaac
actacggttcgcgtgagtgttttggatgtcaatgataacattccagtcatcgtacttccg
ctacttcaaaacgacacggctgagatctatgtccctcgcaatgttggcgttggacatgtg
atcaccatggtcagagcggtggacaatgactttggcgaaagcggccgtttgacttacgag
atcacagatggcaatgaggaacacttgtttgagattgactccgttactggagagattcgg
actgcccagccgctttgggaggaggtttcccctgtggtggagcttatcatcaaagtgatg
gatcatggaaagccaacactctcagccatggctaaacttgttgtgaaggcctactcagga
cctcttccagagggcgaaccgcgaatcaacgctgaacaccacagctgggacgtgtcctta
ccgctgattgtcactctcagcatcatctctattatgttgctggccgccatgatcgccgtc
gccgtcaagtgcaagcgggaaaacaaggagatccgtacctacaactgccgcatcgcagag
tactcacatccccaactgggtaagagcaagaaaaagaagataaacaagaatgacatcatg
cttgtgcagagtgaggtggaggaacgtgacactatgaacgtgatgaacgttgtaagcagc
ccctcgctggccacctcacccatgtacttcgactaccaaacgcgcctccctctcagctca
cccaggtccgaggtcatgtaccttaaaccgtcggccaataacctcagcgtccctcaagga
cacgtaggctgccataccagtttcacagggcccgtgactagcactacggagacgccggtt
aacaggatgtcgataattcagaccgacaacttctccgccgagcccaattacatggggagc
aggcagcagtttgttcaaagcagttcgacgtttaaggacccggagcgggtgagtctgagg
gacagcgggcacggagacagcgaccaagccgacagcgatcaggacaccaataaggggtcg
tgctgtgacatgtctgccaaggaggcactcaagatgaaagccacgggtcttaagcctcag
ccccttgaacaggaagaagactgcataaactgcacagatgaatgccgggtgctgggtcac
tcagatcgctgctggatgccccagttcccaacagtgggcatggcacaggctgagggtctg
gactaccgaaccaatctgtttgttcctgcaggcatggaagctgttgctgctgaaccagaa
agctatgaggccacgggctgcgtcagcggcaaaaagaccttctgcacgttcggcaaggag
cgtcgcgaacacgccgtccttgtggcaaatgtcaagccctatctgaaaggcaagcgagcg
ctcagcccgctgctccaggaggtcccgtcagcctcgtgtagtcctaccaagggcaccaaa
ggcgtcgctgacggggctgagggcaaccccagcaccagccattacgaagggccgaacgga
ctttacacttcaccaggaaagcaaagcagagagcagggctattgctcacaagccacgtcg
gatcccgtcgccaaagtgctgttagaggcacgttcacgaatcagccaggagacggctaac
gagccagatggggcgctggatcatggagtgggggagccaagccgaggcggcatggatgcc
gaacaggtggtcagagacatagataaactgctgcaggactgccgaggcagtgaaactaca
gcggtgagaaagtga
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