Trichomycterus rosablanca: 134331642
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Entry
134331642 CDS
T09921
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
trn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134331642 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134331642 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134331642 (nup153)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134331642 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
134331642
NCBI-ProteinID:
XP_062869209
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All DBs
Position
2:26007902..26035290
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AA seq
1460 aa
AA seq
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MAATGGGKIRTRRYHIVSKPYAKGKQQSGLISRVTDTVKSIVPSWLQRYFKNGEVAEGEE
HEVEVERNNVPTTSYGNQEAASIPDGRNSPKASTSNTEPSTSRASLNFQDALSRPPLNRS
HLHFPSHDGSPALASSSLFSQPSTSSAPFSANPFAVASNFSLVKEIKDNSSQHEDDNIST
TSGFSSRASDKDVPTLKSAPLLWSPEADHTQSGLQLHHNSLKKPAFNLSVFSNSSSQSAV
NNSVLNSSQLGDSPFYPGKTTYGGAAAAKSARSRPGTPYQAPVRRQIKAKPAGAQACGVT
SATARRILQSLERMSSPLADAKRIPSTISSPLSRSLNHTDLDASSLQSKRKKMEPAVPPV
QKLIIPAATAVSGNRSMSFRPSLTPGSVSRTVEKSNKETPVKQTPKNSDARLLPASSVPS
TSNLSYPLSSTPAANVASGGGKMKRERSIRPSSKKADEEVAEVPELPAVLLPISNSSLPT
FSFSTPAFTLTPSTKPLPCLPDKPAFNKENSTVSTPFSTSFTFSSPIVKATVASLPSYSP
SSGFTFSAPTLKTTPSVSNGKFDPAVLAVKASASEIREEFEGPFKPAKFLKEGSVLDILK
GPGFSSPFLNSSNSEKTEKTPSSNSAPLAFSAGFGDKFKPAAGSWNCDCCLVQNKASDKK
CLACAAAKPNKDSVSKVDSKPAKAPAASLSSLFTVEGWECDTCLVRNKPEVVKCVACDTA
KPGTGVKPALNLPPVSEVSFPLIAPPASSTSTTTSSSSTTSGLLGFGDQFKKPVGSWECS
ICMIQNKEQDSKCVACQNAKPGAVSTAPSSQASVPTSATKAPLLGFGDKFKKPEGSWECD
VCCVQNKANDQQCVSCQTAKPGAKVESKGTFGTPSSNTISSSSAFKFGTSSSNSASDGLK
FGGSFSDSSSNTGSFKFGSASSISTSDSAGFKFGGLSSSITEELNFGGDSEASTEPASSG
TSLTGTVKIGGSADGLKFGTTSTPVLSSEENKNTSQDSGAGIKFGGSSGATFGSGAPSTA
ATFSSGGFSFGLSKPEANSGSNSAFSFSTPKAEKETASSITAISATATPAANTLPVFGKP
PVAEPSTASSLGEPAAKVATLAPSTAFLFGGKQDVKKTSPVPSTGFMFNAAKEADKPAQS
VGFSFSKPDPPKELPKPTFAFGKPAEPTETPKPAFGFGQNATDTSAPKPMFGFMTSSSST
PASSNTAPSLFGTATSSSLDATPAPSNAFIFGQNSSSDASTTKAFMFGQQQDSQPAPAEP
SAAPAPSQPFVFGSANSSGAPTFAFGAAGPTQASAAPVPSAAPSPFGFNSSAQTSGFSSG
ETPGFGSSQPSAPAFGSTTSSFTATASSLPAFGAKPGAAPVFGQQSNPTPTFGSSAGPAS
QGGFQFVGAGAFGSSNSGSGVFTFGSGAAGNPPAQSAMSTEAFVAPNFNIGSTKTSFSSP
STGQQGIAGRKIKHAVRRRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacaggaggagggaaaattagaaccaggagatatcatatcgtttctaagccc
tatgccaaaggcaaacagcaatcaggtctgatcagtagagtaactgacacagtaaagagc
atagtaccgtcttggctacagagatatttcaaaaatggagaggtagctgaaggcgaagag
catgaagtggaggtggagcgaaacaacgtgcctactacttcctatggcaatcaggaagct
gcttcaattcctgatggacgcaactctccaaaagccagcaccagtaacactgaaccctct
acaagcagagcatctttaaactttcaggatgctttgtcgcggcccccactcaaccgctcc
cacctacacttcccctcccatgatggttcccctgccctggcttcaagctctcttttctct
cagccctctacatctagtgcacccttttcagcaaacccctttgctgtagcctctaacttt
tccttagtaaaggagataaaggacaacagctctcagcatgaggacgacaatatctccaca
acaagtggtttctcatctagagcatctgataaagatgtacccaccttaaagtctgcacca
cttctctggtctcccgaggccgatcacacacagtctggattgcagttacaccataatagt
ctcaagaaaccagcattcaacctgtctgtcttcagcaattcatcatcacagtcggcggtg
aacaactcggttcttaactccagccaattgggagactcacccttctacccagggaagact
acgtatggaggcgcagcagctgctaagtcggctcgctctcgacccggcaccccatatcag
gctccggtgaggcggcagatcaaggcaaagccggcaggagctcaggcctgcggagtaacc
agtgccacagccagacgcatcctgcagtcactcgagcgcatgtccagccctctggctgat
gcaaaaagaatcccatcaaccatttcttcacctttgtcaagatcgttgaatcacacggat
ctagatgcatccagtttacaatctaaacggaaaaaaatggagccagctgttccacctgtg
cagaaattgattatcccagctgcaacagctgtgtctggtaaccgctccatgtctttccgg
ccatcgctcactcctggatctgtgagcagaacagtggagaagagcaacaaggagacacct
gtaaaacagacacctaagaattcagatgccagattacttccagcaagtagtgtccccagc
acaagcaatctttcataccccttatccagcacacctgctgccaacgtcgcaagtggtgga
ggaaaaatgaagagggagaggagtatccgaccttcctccaaaaaagcagatgaggaggtt
gctgaggtgccagagctgcctgctgttttattgcccataagtaactccagtctgcccacc
tttagcttctcaacccctgccttcactctcacccccagcaccaaaccactgccttgccta
cctgataaacctgctttcaacaaggaaaactccactgtatccacaccattttccacatcc
tttactttctcatcacccatcgtaaaggcaacagttgccagtctaccatcctactcgcca
tcttcaggatttacctttagtgcacccactttaaaaaccacaccatctgtctcaaatggt
aaattcgacccagcagtacttgcagtgaaagcatctgccagtgaaatcagggaggaattt
gaggggccttttaagcctgccaagttcctgaaagagggcagtgttctggatatccttaag
ggtccagggttctcctcacctttcctaaactcctccaactcagaaaaaaccgagaagacc
cccagcagtaacagtgcgccacttgctttttcagctggatttggggacaagtttaaacct
gctgcaggatcatggaactgtgactgctgtctggtgcaaaacaaggcttcagacaaaaag
tgtttggcctgcgcagccgcaaagccaaacaaagactctgtctctaaagtggacagtaaa
cctgcaaaagcccctgctgctagtctttcctcattgttcactgttgaaggctgggaatgt
gacacgtgtttagtacgtaacaagcctgaggtggttaagtgtgtagcatgtgatactgca
aagcctgggactggagtaaaaccggcactgaatttgcctcccgtttctgaggtgtccttc
ccacttattgcccctcccgcgtcgtccacttcaacaaccacatcgtcctcttctaccaca
tctggactgcttggctttggcgaccagtttaagaagccagtgggctcgtgggagtgcagc
atttgcatgattcagaacaaagaacaggacagcaaatgtgtagcatgtcagaatgctaaa
cctggagcagtgtctacagcaccttcatcccaagcttctgtgcccacatcagctactaaa
gcaccgctgttaggatttggagacaagttcaaaaagcctgaaggcagctgggagtgtgat
gtttgctgtgttcagaacaaggctaacgaccagcagtgtgtgtcctgccaaacagccaaa
ccaggagctaaagtagaatccaaaggtactttcggcactccctcatctaacaccatctca
agctcttctgcttttaaatttgggacaagttcttccaattctgcctctgatggactgaaa
tttggtggcagtttttcagattcatcctccaacacagggtcttttaaatttggtagtgct
tcctcaatctccacctcggattctgcaggcttcaagtttggaggcttatcctcgagcatt
acagaggaattaaattttgggggggactcagaagcctctacagaacccgcctcatcaggc
acaagtttaacagggacagtgaaaattggtggttctgctgatggcttgaaatttgggaca
acctctactcctgtgttatccagtgaggagaacaagaacacctctcaggactctggtgct
ggtattaaatttggtggaagcagtggtgccacttttggctctggcgctccaagcactgct
gcaacattttcatctggtggcttttcctttggactctcgaaacctgaggcgaactccggc
tctaattcggcgttcagtttttcaacacccaaagctgaaaaagaaacggcttcttctata
acggctatttcagccactgccacccctgctgccaacactcttccggtttttggcaagcca
ccagtggctgagccctcaactgcttcatcactgggagagccagcggcaaaagtggcaacc
ctggctccatccactgcatttttatttgggggaaaacaggacgtaaagaagacttcccca
gtaccctcaactggattcatgttcaatgcagccaaggaggctgacaaacctgcacagtca
gtgggtttttcttttagtaagccagatcctccaaaagaattacccaaacctacttttgca
tttggaaagcctgctgagcccacagaaacccccaaaccagcatttggctttgggcaaaat
gcaacagacacttcagcaccaaagcctatgtttggcttcatgaccagttcatccagcacc
cctgcatcctctaatactgcacccagcctctttggaactgccaccagttccagccttgat
gccacccctgctccaagcaatgcctttatctttggccagaattcctcctcagatgcttct
actaccaaggctttcatgttcggacagcagcaagacagccagccagctccagcggaaccc
tctgctgctcctgctccttcacagccatttgtcttcggttcagcgaacagctcgggtgca
cccacgtttgctttcggtgctgcaggcccaacccaagcatctgcagcccctgtaccatcg
gctgctccctctccatttgggtttaactccagcgcacagacctctggctttagctctgga
gagacaccagggtttggctcatcgcaaccaagtgccccagccttcggatcaactacgtcc
tcatttacagccacagcctcctcgcttcctgcttttggagccaaacccggtgctgctcct
gtgtttggccagcagtctaaccctacacctacttttggatcttctgcaggccctgctagc
caaggaggtttccagtttgtaggtgctggagcttttggatcatccaatagtggcagtggt
gtgtttacctttggatcaggagctgcaggcaatcctccagcacagtcagcaatgtcaaca
gaagcctttgtggcaccaaactttaatattggatctacaaaaacttccttcagctcacca
tccactggacagcagggcattgctggccgcaagatcaaacatgctgtccgacgtagaaag
taa
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