Trichomycterus rosablanca: 134331737
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Entry
134331737 CDS
T09921
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn02010
ABC transporters
trn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134331737 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134331737 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134331737 (abca7)
Transporters [BR:
trn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
134331737 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
134331737
NCBI-ProteinID:
XP_062869316
LinkDB
All DBs
Position
17:complement(11039087..11083521)
Genome browser
AA seq
2325 aa
AA seq
DB search
MAVGTQLLLLLWKNFTYRRRNKIQLTIELLWPLFLFFILISVRHSEPPYKQSQCHFPNKA
LPSAGTLAWVQGIICNINNPCFHHPTPGETPGQIGNFNNSIISRLLVDARTILTNFANRT
TPSALEDFSLAVQRLGERQDVWPNLPVGDYLKANETFSSFLRNNCSMPSSAVEQLLRTRL
NLQVVALAGAQTRLSDIVCNATLLGRYLSVEGDSSFTELQENLCAIPADLLQQAERIFLS
QLDFSRIFTRERLRSSATELRPLFKAASSVARELASIIDDISSLSSFSELNSELSLLSPE
NRSALPRESFRAFSRIMCGHPEVGGDRIPSLNWYEDQDIKSFLGRNGTENIDLENDNTTT
PFCKRFIKSLEWNPLSRIVWRGIKPLFIGKLLYTPDTPATRRIMKEMNRTFQDVEILELV
HDAWEEVGPRLKTFMESSLEIRMLQNLLKRPEVAIMVNLQLVNTSWTASRIAQFLSTSNV
DSPRGKDAPPTWLDVYRDFNSSIMLLSELSKCFSQNKLEGAATEGELVERALELLEDRQF
WAGIVFLLPDPSSPNLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDMRYIWGG
FVYVQDLVERAITRVLSGKQPTTGIYIQQMPYPCFVDDVFLRILNRSLPLFMTLAWIYSV
AMIIKGIVYEKEARLKETMRIMGLGSGTLWLSWFISSYLPFLISSGLLVTALKLGDILPY
SDPVVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFSLYLPYVLCVAWREYLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNVQSSPAEGDNYNFTTSIIMLYVDA
FIYAVATWYIEAVFPGQYGIPRPWYFIFQLNYWGGAPLEAGMPIPPAPHDQLQNKIEAEP
THLVLGVAIHNLVKMYKKGAKLAVNHLSLKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTVYIKGLDIRTHMDTIRRTLGVCPQHNVLFPILTVEEHVWFYGRMKGMSSAEVKKEM
AGLLEDVGLLHKCHEQTRNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYRKDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSPLFLKSRLGTGYYLTVVKN
EPPSQTASSTSATTLSAPMVTKESDSSLSDDTGLGTEIHGSDLSGLIALAQRHIPGAQLV
EDFGREAVINFPHTSSENGSLALLLAELDRRLCEFGIVSYGLSDTTLEEIFLRVAEETGV
DADIGGGEKETPEDRDTGKRNIRTAQETDPLSRDIQDGMTLTGWGLTRQQLRALFTKRLK
YAMRSRRGLLAQIVLPAVFVLIALLFSLIVPPFGKYPPLELQPWMYGEQYTFFSNDAPEE
PEILNLLDALLDPPGFGTKCIDSDIGPQCNDTELETVFLRPQISYTTWQFFSKGNWTAEN
PSPECECSTEEVRRMLPDCPMGAGGLPPPQIKRLTGDFLQNLTGRNLSDYLIKTYPQILK
KSIRTKKWVNEFRYGGFSLGGKHSQTLTDRSQLEESVMAIRTRYRLIENSSLDQVLARLP
DVLTDLSSQNNVKVWFNNKGWHAMVSFVNIMNNGLLRASLPPGPARLKHGITAYNHPLNL
TKEQLTELALITTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGVKPVLY
WTANFVWDMLNYTVPATMVVLIFISFQQQSYVSEKNLPALVLLLLLYGWSITPLMYPASF
VFSVPSTAYVVLTSINLFIGINGSIATFVLELIVDEHLNEVNRILKKVFLIFPHFCLGRG
LIDMAKNQAMADAFQRLGNKQTLEPLAWDFVGKNLFAMAVEGVVFFIFTLLLQYRFFIHC
RPWSDPVLPDLGLEDEDVAKERERVKNGKTDRDILTVKDLSKVYKAGRMPAVNQLCLSIP
RGECFGLLGVNGAGKTSTFRMLTGDTSITYGDAFLSNYSVLNEMDRVHQLMGYCPQFDAI
SDLLTGREHLEFYARLRGVPEAYVTKVAQWGVKKLGLTHYAEQKAGGYSGGNKRKLSTAI
SLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSIIKEGRAVILTSHSMEECEALCTRMAIM
VNGSFQCLGSVQHLKNRFGDGYTIILRLSAPSPDPCPVDAYIQKSFPGIELKERHHNVLQ
YQLPTQACSLARVFDILSKNREELGITDYSVSQTTLDQVFVNFAKEQMDDDDRLREVAVN
SASVTAQSSRHEQSNQTVHPHPVPSSPPLTASPGPSRSASSSPAQFSHSRGSRVKESKPK
GPSETKQPQLIQMKPLVESAANGSVCSPKEKSQSKDLTKLFVVKT
NT seq
6978 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgggacccagctcttgctcctgctgtggaagaactttacctatcgcagaagg
aacaagatccagctgaccatcgagctgctttggccactcttcctgttttttattctcatc
tctgtacgtcactctgagcctccctacaagcagagccagtgtcactttccaaacaaagcc
ctaccctctgctggaactttagcatgggttcagggcattatctgcaacatcaacaaccca
tgcttccaccacccaactccaggggagactccggggcagataggaaattttaataactcc
ataatttctcgactcttagtggatgctaggactatcctcaccaactttgccaaccggaca
actccttcagccttagaagacttttcactggctgttcaaagactgggcgaaagacaggat
gtttggccaaatcttccagttggagattacttaaaagccaatgagacattctcttccttc
ttgagaaacaattgcagtatgccctcttcagctgtggagcagttactcaggacccgactt
aacctccaggtggtggcgttggcaggtgctcagacacgtctgtctgatatcgtctgtaac
gctaccctcttgggccgctacctctctgtggaaggggactcctcgtttacagagctgcag
gaaaacttgtgcgccattccagcagatctactgcagcaagctgagcggattttcctttcc
cagctggacttcagcaggatatttacaagggagcgactgcgctccagtgctactgaactg
cgtcctctcttcaaggctgcctcctcagtggctcgggaactcgcctccataattgacgat
atatcttccctatctagtttctcggagctgaattcagaactgagcctactctcgccagag
aatcgctcggctctgccacgcgagagcttccgagctttctcccggatcatgtgcggccac
ccagaggttggtggtgacagaattccgtccttaaactggtatgaagaccaagacatcaag
tcctttctgggaaggaacgggacagagaacattgatcttgaaaatgacaacactaccact
ccattctgtaaaagatttattaaaagcctggaatggaatcctctctctcggattgtgtgg
agaggcatcaagccacttttcatcgggaaacttttatacaccccagatactcctgctaca
cgtcgcattatgaaggagatgaacaggactttccaggatgtagagattctggagttggtg
catgatgcatgggaagaagtgggaccaaggctcaaaacctttatggagagcagcttggaa
attcggatgctacagaatttgctgaagcggcctgaagtggccattatggtaaacctgcaa
ttggtgaacacatcttggacggcgtctcggatcgcccagtttctgtccacttctaatgta
gatagtccaagaggaaaagatgcaccacctacatggctggacgtgtatagggactttaac
agcagcattatgcttttatcagaactctcaaagtgtttttcacagaataaactagaagga
gctgccacagaaggagagttggttgagagggcattggagctcctggaggatcgtcagttt
tgggctggaatagtctttctccttccagacccttcctctccaaatctacctcctcatgtc
aagtacaagatccgcatggacatagatgatgtgactcgcacgaacaagatcaaagacaag
ttctgggacccaggtccagctgcagagcccttcagtgacatgcgctatatatggggcggc
tttgtctatgtgcaggatttagtggagcgagcaataacacgtgtgctcagtggcaaacaa
ccaactacaggaatctatatacagcagatgccttacccatgctttgtggatgacgtcttc
ctgaggatcttaaatcgttcactacctctcttcatgaccctggcgtggatctactctgta
gcaatgatcattaaaggcatagtgtatgagaaggaggcacgcttaaaagagaccatgagg
ataatgggattgggttcaggcacgctgtggctcagctggttcatcagcagctacctgcct
tttctaatcagctctggcctgctcgtcactgcactcaagttgggagacatcttaccctac
agtgaccctgtggtggtcttctttttcctggctgcctttgccacagccaccatcatgctg
tgcttcctcatcagcacgtttttctcccgtgccaacctggcagcagcatgtggagggcta
atctacttctccctctacctgccctatgtgttgtgtgtggcctggagggaatacctgacc
agcacacacagaatcttagcaagcttcctctctccagtagcctttggatttggctgtgag
tatttctctcagtatgaggagcaaggagtgggcatccagtggttcaatgttcagtccagc
cctgctgaaggagacaactacaactttactacctcaattataatgctgtatgtggatgcc
ttcatttatgcagtggcaacttggtatattgaagcagtgtttccaggacagtatggaatt
cccaggccctggtactttatcttccagttaaattactggggaggagctccactggaggct
ggcatgcccattcctccagcaccccatgatcaactacaaaataaaattgaagcggaaccc
acccacctcgtacttggagtagccatacataacttggttaaaatgtataaaaaaggggcc
aagcttgctgtcaatcatttgagcctcaagttttatgagggccagatcacctcatttctg
ggtcacaatggagctggcaagacaaccactatgtccattctgactgggcttttcccccca
actgctggtacagtgtacatcaagggtcttgacatccgcacacacatggacaccattcgc
agaactctgggagtgtgtccccagcacaatgtcctcttccctatcctgactgtagaggag
catgtgtggttctatggtcgcatgaaaggcatgagcagtgctgaagttaaaaaggaaatg
gctggactgctggaggatgttggactgttacacaaatgccacgagcagaccaggaacctc
tcaggaggcatgcagaggaagctgtctgtggccatagccttcatagggggttcaaaagtg
gttgtcttggacgagcccactgctggagttgacccttattctcgacgtgggatctgggac
cttttgcttaaatatcgcaaagaccgtaccatcattctgtctactcactacatggacgaa
gctgaccttctgggcgaccgcattgccatcatttctcaggggaaactgtgctgttgtggt
tcgccgctcttcttgaaatcacgtctgggcacaggctattaccttacagtagtaaagaac
gaacccccgagccaaacagcaagcagcaccagtgctaccacactctcagcacctatggtc
acaaaggagagtgattcttcattaagtgatgacactggactcggaactgaaatccatggc
tcagatctgagtggtcttatcgctctcgcacagcgacacataccaggggctcaactggtg
gaggactttggaagagaggcagtcatcaactttcctcatacttcctcagaaaatggctct
ctcgcccttctcctggcagagctggacaggcgcctgtgcgagtttggaattgtcagttat
gggctctctgacaccacactagaggagatttttctgagggttgcagaggagacgggggta
gatgctgatataggaggaggagagaaggaaacacctgaggacagagacacagggaaacga
aatatcagaacagcccaagagactgacccgctgagtagagatattcaggatggcatgacc
ctgacaggctggggactgaccagacagcagctacgggcactcttcaccaagagactgaag
tacgctatgcgcagtcgtagaggcctcttggctcagattgtgctaccggcagtgtttgtc
ctgatcgctttgctcttcagcctcattgtcccaccctttggcaagtatcccccgcttgag
ctgcagccgtggatgtacggcgaacagtataccttcttcagcaatgatgcaccagaggaa
ccagaaatcctaaatctccttgatgctctgctggatccacctggatttggaaccaaatgc
atagactcagacatagggccccagtgtaacgacactgagctggagacagtgttccttcgg
ccccagatctcctacactacctggcaattctttagcaagggtaactggacggcagagaac
ccttctcctgagtgtgagtgcagtactgaggaggttcgcagaatgttgcccgattgcccg
atgggagcaggaggtctaccaccacctcagatcaagaggctgacaggtgactttctgcag
aatctgactggaagaaatttatccgactacctcatcaagacttatccgcagattttgaaa
aaaagcataaggactaaaaagtgggtgaatgagttcaggtatggaggtttctctctgggt
gggaaacactcccagactctaacagaccgcagtcagctggaggagtctgttatggctata
agaacacgctacaggttaatagagaacagctcactggatcaagttctggccagactaccc
gacgttctcactgatcttagtagtcaaaacaacgtgaaggtgtggtttaataataagggc
tggcatgccatggtgtcatttgtcaacatcatgaacaatggactgctgcgtgctagtctc
cctccgggacctgctagactgaaacatggaataactgcctacaaccacccgcttaatctc
accaaagaacagctcactgaactagctttaatcaccacatcagtggatgtcctagtttcc
atatgtgtgatttttgccatgtcctttgtgccagcaagtttcgtgctctttctgattgaa
gagagggtcagcaaggctaagcacctccagtttgttagtggggtcaaaccagttctgtac
tggacggccaactttgtttgggacatgctgaactacaccgtaccagctacaatggtggtg
cttatcttcataagcttccagcagcagtcttatgtatcagagaaaaaccttcctgcacta
gtgctgttgcttttgctctatggctggtccatcactcctctcatgtaccctgcgtctttt
gtgttctctgtgcccagcacagcttatgtggtcctcacctccatcaacctcttcatcggc
atcaatggcagcatagccacatttgttcttgaactcattgttgatgagcatctaaatgag
gtgaacagaattctgaagaaggtcttcttgatctttcctcacttttgtttgggtcgaggt
cttattgacatggctaaaaaccaggcaatggcagatgctttccaaagactggggaacaaa
cagacactagaaccactggcctgggattttgtagggaagaatttatttgctatggcagtg
gagggggtcgtcttctttatatttactctactgttacagtataggtttttcatacattgc
aggccgtggtctgatcctgtcctgccggatttgggcttagaggatgaggacgtagcgaag
gagagagaacgagtaaagaatggtaaaacggatcgagacatccttactgtcaaagactta
agcaaggtgtataaagctggaaggatgccggcagtgaaccagctttgtctcagcattcct
cgaggagagtgctttgggctgcttggagtaaacggggctggaaagacgtccaccttccgc
atgctgacaggagacacatccatcacctatggggatgctttcctcagcaattacagtgtg
ctgaatgagatggacagagtgcatcagctcatgggctactgtcctcagtttgatgccatc
agtgatcttttgactggacgtgagcacctcgagttctacgctcgattgagaggagtcccc
gaggcatatgtgacaaaggtcgcccagtggggtgtgaaaaagctgggattgacacactat
gctgagcaaaaagcagggggctacagtggaggcaataaacgcaaactctcaactgctatt
tctcttattggagctccaccagttatttttctggatgagcccacaacaggaatggaccca
aaagctaagcgcttcctgtggaactgtattctcagcattattaaagaaggccgagctgtc
atcctcacatcccacagcatggaagaatgtgaggcactctgcacccgaatggccatcatg
gtcaatggcagtttccagtgtttgggttcagtgcagcatcttaaaaacagatttggagat
ggttacacaattattcttcgcttgtctgcaccatctccggatccctgcccagtggatgct
tacattcagaagtcctttcccggaatagagctaaaggagcgacaccacaatgtcctgcag
tatcagctgcccactcaagcttgctccctcgctcgtgtgtttgatattctgtcaaagaac
agagaagagctgggaataacagattattctgtatctcagaccacactggatcaggtgttt
gttaactttgccaaagaacagatggatgatgatgaccgactcagagaggtggctgtaaac
agtgcatcagtaacagctcagtccagcagacatgagcagtctaatcaaactgtccatcct
cacccagtaccatcttcccctcctctaaccgcctcccctggacccagcagatcagcatct
tcctcccctgctcagttctctcattccagagggtcaagagttaaagaaagcaagcctaaa
ggaccgtcagagacaaagcaacctcagctaatccagatgaaacctctagtggagtcagca
gctaatggatcggtgtgcagccctaaagagaaatctcagagcaaagaccttaccaagctg
tttgtcgtcaagacctga
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integrated database retrieval system
