Trichomycterus rosablanca: 134331739
Help
Entry
134331739 CDS
T09921
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
trn
Trichomycterus rosablanca
Pathway
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134331739 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134331739 (slc6a5)
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134331739 (slc6a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134331739
NCBI-ProteinID:
XP_062869319
LinkDB
All DBs
Position
17:29097710..29122283
Genome browser
AA seq
656 aa
AA seq
DB search
MSQNNCPSSVRQGAVVVLGTDGTASVHLNREEQEDDDGDGDENKARGNWSNKLDFILSMV
GYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPVSVWKA
IPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASFTSLKGSLPWTYCRNEWNTAECKD
KDMLQLDSCIIRERNFTSLRNSTFCLSANAAGSLSKLLNITTDNRSYASPSEEYFKYNVL
HISKGIEYPGDIRWPLAACLFLAWIIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRG
VTLPGAGSGILYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYR
DTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEQVADEGPGIAFVVYPEALTRLPVS
PFWAIIFFLMLLTLGLDTMFATIETIVTSVADEFPKYLRKHKPIFTLICCVFFYILGFPM
ITENGMYMLQLVDTYAASYSLVIIAIFELVGVSYIYGLQRFCEDIEMMIGFQPNKFWRIC
WAFVTPTILTFILALSLYQWKGMTYEDYTYPTWSMVLGWLMVICSVIWIPIMFVIKMLLA
PGSFIERLKLVCSPQPDWGPFLTKHRGERYKNMIDPLGTNSLGLKLPPKDFQLSDS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaataactgcccctcctctgtgaggcagggtgctgtggtggtcctgggcaca
gatggcaccgcgtctgttcatcttaaccgggaagaacaagaagatgatgatggtgatgga
gatgagaataaagccagaggaaactggtccaataaactggattttattctctccatggtg
ggctatgctgtgggtttggggaacgtctggaggttcccgtatctcgccttccaaaacgga
ggaggtgcgtttttgattccttacctgatcatgttgtgtctggctggaattcctatcttc
ctattggaagtttctctgggccagtttgccagtcagggaccagtttcagtgtggaaggcc
attccagctttacaaggttgcgggattgccatgttgataatatcagtcttgatagccata
tactataatataataatgtgctggactctgtactacctgttcgcttcgttcacttcgttg
aagggctcattgccatggacctactgcaggaacgaatggaacacggccgagtgtaaggat
aaagacatgctgcagctcgattcctgtatcatccgggaaagaaatttcacctccttaaga
aacagcactttctgtttatctgcaaatgctgctgggagtttaagcaaactgttaaacatc
acaactgataacaggagctacgccagtcccagtgaagaatattttaaatataatgtattg
cacatctccaaaggaattgagtacccaggtgatatccgctggcctctggctgcctgcctt
ttcttggcatggatcattgtttatgcatctttggctaaaggaatcaagtcatcaggaaag
gtcgtgtattttacagccacgtttccgtatgtggttttggtgattttgttgattcgggga
gtgactctacctggtgctggatctggcatcctgtacttcatcacacccaaatgggaaaaa
ctcaacgatgccaaagtttggaaggacgcggcgactcagatctttttctctctctcagca
gcgtggggaggattaatcactctctcctcctataataaattccataacaactgttacaga
gacacgataatcgtgacgtgcactaacagcgccaccagtatctttgctggttttgtgatt
ttttctgtcatcggcttcatggctcatgagctgaaggtgccgattgagcaggtcgcggat
gaagggccgggtattgcattcgtggtttacccagaagccctcaccaggttgccagtctct
ccgttttgggccatcatcttcttcctcatgctgctcacgctcggccttgataccatgttt
gccaccatcgagaccatcgtgacatcggtagctgacgaatttcctaaatatctgcgcaag
cacaaacccatcttcaccctcatctgctgcgttttcttctacatcctgggatttcccatg
atcacagagaatggaatgtacatgcttcagttggttgatacgtacgcagcatcatattct
ctcgtcatcatcgccatctttgagctggttggagtttcatacatctacggtttgcagaga
ttctgtgaggatattgaaatgatgatcggtttccagccaaacaagttctggaggatttgc
tgggcttttgtaactccgactatcctgacatttattttagctctgagtctgtatcagtgg
aaggggatgacgtacgaggactacacctaccccacctggtccatggtgctcggctggctc
atggtcatctgctccgtcatctggatccccatcatgttcgttatcaagatgctcctggcg
ccggggtcctttatagagcgcttgaagctggtttgttcccctcagccggactggggtccg
ttcctgacaaaacatcggggtgagcgctacaaaaacatgatcgaccccctgggaacgaac
tcgctgggtcttaaacttccaccgaaagacttccagctctccgactcctaa
DBGET
integrated database retrieval system
