Trichomycterus rosablanca: 134331823
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Entry
134331823 CDS
T09921
Name
(RefSeq) scaffold attachment factor B2-like isoform X1
KO
K25092
scaffold attachment factor B
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134331823
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134331823
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
134331823
NCBI-ProteinID:
XP_062869427
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Position
17:complement(3204125..3216917)
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AA seq
760 aa
AA seq
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MSEASSAADSGLGEVPEGAGVRKLSELRVIDLKAELKKRNLDISGNKSQLSERLKKAIEE
EGGNPDEIVVQLEITPKKTPRRTPKGKKAETDELEEGTVEDESVDGQEAYAQAENVHDMD
MMDMNVLDEADVDNVAGSDEYDEDELLKDSYTDFTAESKLEEESETNADENGKLDKQETL
PKEDSEDMKESEKVAGSCKSEPLKEEPEEEDNVSDLAKAEDADNMKVDNNASKQSKVHPP
CGDQQGVKDNFSDAESASAQANVTEIENADSGSAPKTGETDEDKKSDESASEAKESSVEG
GDQKKSSDEKSSKAESKDDKGSVTSSGRSLWISGLSSTTKATDLKTLFSKYGKVAGAKVV
TNARSPGARCYGFVTMSSADEATKCIENLHRTELHERTIFVERAKNEPAGKKPADKKSSD
LSKDKKAKGSDDKDGEGTDAMDKSKAESGDEKSKSRERSTDSHERKSSSRDRSDIVSFEE
IKRRQERERQRRREQNLQDAERRHHSSDRDGRFERERIRQFREREEHDRLNRKRDLLEVE
KRRLESDRMERECLERMRLRVEYERRREQDRIDREREELRRQQEQLRFEQDRRPLKRPFD
MDSRKDDWSAKRMSMDDRFGRQDRFQDIDHRDRNRVQDMFMDRRDGPKGGMSGDRNGQHF
SDRDRHSRDSRDNLGGGGGFDKRPMNAPGRDLESGRKMDGDRPWQGSNRGMPGQSSMGRG
GMNSRGGFMKSGPSRQMSGNLNRPNQMMQGGGGGTFNRRY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggccagttcagctgcagattcggggcttggcgaggttcccgagggcgcagga
gttcgtaaattatctgagctgagagtgatcgatctgaaggccgagctgaagaagagaaac
ctggacatcagcggtaacaagagccagctgtccgagcgactcaaaaaggccattgaggag
gaaggaggaaatcctgatgaaatagtggtacagcttgagataactcctaagaaaacacct
cgcagaactcctaaaggaaagaaagcagagacagatgagttggaggaaggcacagtcgaa
gatgaatctgtggatggccaggaggcttatgcacaggcagaaaacgttcatgacatggac
atgatggacatgaacgttttggacgaagctgacgtagataacgttgctgggtccgatgaa
tatgatgaggatgaacttctaaaggacagttacacagatttcacggcagagtccaagcta
gaagaggaaagtgaaactaatgctgatgaaaacggaaaactggataaacaggagacttta
cccaaggaagactctgaagacatgaaagaaagtgagaaagtagccgggtcttgtaaatca
gagccacttaaggaggagccggaagaggaagacaatgtgtccgacctcgctaaagccgag
gacgccgacaatatgaaggtggacaataatgcctcgaagcaaagcaaagtccatccgcca
tgtggggaccaacaaggcgtaaaggacaatttctccgatgccgagagcgcgtcagctcag
gctaatgtcacggaaattgaaaacgccgactcgggatccgcaccgaagaccggagagaca
gatgaagacaagaagagcgatgagagcgcttctgaagcgaaagagtcctctgtagagggt
ggtgatcagaaaaagagcagtgatgagaaatctagcaaagctgaatcaaaagatgacaaa
ggttctgtcaccagcagtggaaggagtctgtggatcagcggcctttcttcaaccactaaa
gcgactgatctgaagactctgttcagcaaatatggcaaggtggccggtgctaaagtggtg
acgaacgctcgcagtccaggagctcgatgctacggctttgttacgatgtcttcagcagac
gaggccaccaagtgtatcgagaacctacatcgcacagagctgcatgagcgaacgatcttt
gtagaaagagccaaaaacgagccggctggaaaaaagcctgctgacaaaaaatcatctgac
ttgagcaaggataaaaaagcaaaaggctctgatgacaaagatggagaaggaactgatgca
atggacaaatctaaagcggagtctggcgacgagaaatccaagagcagagagcggagcacc
gacagtcatgagcgcaagtcctccagcagagacaggagtgacatcgtgtcatttgaagaa
atcaagcggcggcaggagcgcgagaggcagaggcgtcgcgaacaaaaccttcaggatgct
gaaaggcgtcaccactcaagtgaccgcgacggccgctttgagcgcgagcgcatccgtcag
ttccgcgagcgcgaggagcacgacaggctgaaccgcaagagagacttgctggaggtggaa
aagcgacggctggaatccgaccgcatggagcgcgaatgtctggagcgtatgcgcttgcgg
gtggagtacgagcgcaggcgcgagcaggatcgcatcgaccgcgaacgcgaggagctgcgc
aggcagcaggaacagctccgcttcgaacaagaccggcggccacttaagaggccattcgac
atggactccaggaaggacgattggtcggctaagaggatgtccatggatgatcgcttcgga
cgacaggaccgctttcaagacattgaccacagagatcgcaaccgcgtccaggacatgttc
atggacaggagggacggtcccaaaggaggcatgtccggagacagaaacggccagcatttc
tccgatcgggacaggcatagcagggactctcgagataacttgggtggtggtggtggtttt
gataagcgtcccatgaatgcacctggaagagacttggagtctggccgtaagatggatggt
gaccgaccctggcaaggttcaaaccggggcatgccaggccagagcagcatgggccgtgga
ggaatgaacagccgtggtggattcatgaagtcaggaccttctcggcaaatgtccggaaac
ctaaaccgaccgaaccagatgatgcagggtggtggtggtggcaccttcaaccgtcgctac
tga
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