Trichomycterus rosablanca: 134331885
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Entry
134331885 CDS
T09921
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134331885 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
134331885 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NACHT
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
DUF4062
AAA_16
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_RIG_2nd
PQQ_2
AAA_22
WD40_MABP1-WDR62_1st
NPHP3_N
NPHP3
AAA
ATPase_2
APAF1_C
Motif
Other DBs
NCBI-GeneID:
134331885
NCBI-ProteinID:
XP_062869491
LinkDB
All DBs
Position
17:complement(22028551..22045969)
Genome browser
AA seq
1630 aa
AA seq
DB search
MLAVGNEVAVMELIEALGIEALRGHNTSCPQPPSNVVRVFISSTISDLASERNAFWEKAY
PELQGFCQNLGLVFEVVDFRWGMSDSIIGDHITTELCLQEIKLCQKVSAGPSFLAFVGTQ
YGARPLPRFISESEFDVLLSKLSKDREGLTLVKKWFIRDDNSVPLKYILQPISIHYPYYN
DTTPEARAQHDGNVLSWNLTEARLLQLLCSAALQAEKDGDISPEQKHKFFKSMTEWELED
GFLRCQQDQDQPLAVIFMKELANLKKSEYNKHASKFLDVTADGLLDTEAQELLTNLKQRI
NNACLGKLEIQSLELNNAAIDVNRKEHRNYLEKFCEQVMSQIKSKINRQAPPIIDGGSLW
LQQELFHHANLSYQRCSVFTGRDGLLAKLGLIIWESTNFHHPPLIVYGPPETGKTALLCK
LAQQMLAVLEPQAVVALRLLGTSPLSTDADSVLRGICFQVCGAFGLATPCPQTAKSHDKL
VTFFHAMLQQVSKKGETLVLILDSLDHLSQTSNAHTLQWIPKEIPPNVHLVMSALNHGSP
LKKLNEMFNDETFFLQVEPLTSGQGQAIIDASMSAAGQRLTSEQVQAILQSFHKTGSPLH
LKLILDMAKQWSSYTNMSEIYLGSSVQEIISLFLQRLEIKHGERLVCHALGYISLSRCGL
SEAELRDVLSLDNDVLAEVYQSWLPPSHTLIRFPPLLWARLKHDLGDYLMERWENGIVVL
GFSLRNFTEMVQERYLTAEKRVEMHIILSEYFSGQWSQGQLKPIHLPSLKTQLNADRKVP
CQPLWFTEGIANLRMLHELPYHLIHAEKLEELCKAVIGNLEWLYCKTLSCGVASVIQDLS
LCLDVMDCPEIKLIRDCFLLLKPTIDFIDGHIDPSLLFTELCARLQALAPAYHSLIGCLC
SDCHDWFASCPDPVLVPKCTFLQSPGGPLESTLSSFVKGFTAVDVCAERDLLIAGSVDGV
LILWDLKHLEVLHTLVGHTGAVQSVKLVQGGDHCLSTGLDGSLKKWSLLSGKQIYCIPAA
VSVQPWSAEQILVFESSAMVLSNAQGQVKSWHLDTGELLYEADVNGECSILAGLGEDVAV
LSSDGQLWLHDSSTGAQKSHSQLSSEQGFTVSTVLTLPRHDRLLVACQERSLLLVSATGT
VADVELLAPASFMCTSEDENVLFAGCERTLAVLHVNSATVQKTLEFQHEATVLSAVSYSS
GSKVITGSQDHVIRLWGLITGQLLDCFSGMGSPVTFLSVYNTIIISASTTSDCFKLWQPE
YNPKHKSQPCIPANCPRVVACKDGNTVHFIRKEDRKKVFTWSFSDGEPNCLSPDLMDVSS
EVCCMELAQQKRLLFCGLCKGTVLIYPLDFAQETLCLLPPESLHAVRSMAISSREDKIAV
AYEDEVCLFEITARDSFPCVEGPSHRYSLSLLHSPVSAMALLPDCRLLYGTLGGEVAIYD
FRSASAAELDHHASAITCIAMSNWDTHALVGSADCVQKLWSLKPMMLDHTMEYKGFYFEG
VLCAAFSVNDKYVFTGSQDKTIKVWDVSTGSLLYIQYVYAAVIRITPHKDGFVAISQNGS
FIKEGFHCPYTLPSDYNPLRNFRAHYRVTSREKSLDPTHNLFKDIHSYNPLQFNLMSVLK
TKKSNTCVVL
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgttggctgtaggaaatgaagtggctgtgatggaactgatagaggctctgggaatcgag
gctctgcgtggacacaatacgagctgtccgcagcctccatccaatgtggtccgagtgttc
atcagctcaactatttcagatttggccagtgaaagaaatgccttttgggagaaagcatat
cctgaattacaaggcttctgtcagaatcttggccttgtctttgaggttgtggatttcaga
tggggcatgtccgattcaataatcggtgatcacattacgactgaattgtgcctgcaggag
atcaagttatgtcagaaagtttctgctggtcctagttttcttgcttttgtagggactcag
tatggtgcccgtcccctcccacgcttcatatcagaaagcgagtttgatgtactgctatcc
aaattgtccaaggaccgagaaggcttgacacttgttaagaaatggttcattagagatgat
aactcggtaccactgaaatacatcctacagccaatcagcatccactatccttattacaat
gacacaacacctgaggctagagcacaacacgatgggaatgttttgtcctggaatctcact
gaagctcggctgttgcagcttttatgcagtgcagcactacaagccgagaaggacggggac
atcagtcctgagcagaagcacaagttcttcaagtcaatgactgagtgggagctggaagac
gggtttctcagatgtcagcaggatcaggaccagcctttagctgtcatcttcatgaaggaa
cttgctaatttaaagaaaagtgaatacaataagcatgccagcaagtttttggatgtcaca
gctgatggtctcttggacactgaggcccaggaactcttgaccaatctaaaacaacgcatc
aacaatgcctgcttaggcaaacttgaaatccagagcttggaacttaacaatgctgctatt
gatgtgaaccgtaaagaacacaggaactatctggagaaattttgtgagcaggtcatgtct
cagataaagagcaagattaacagacaagcacctccgatcatagatggagggtcgctttgg
cttcaacaggaactttttcatcatgcaaatttaagttatcagagatgttctgtttttact
ggaagagacggtcttcttgccaagcttggcctcataatatgggaatctacaaattttcat
cacccccctcttattgtatacggtcctccggaaactggtaagactgctctgttgtgcaag
ctagcccagcagatgctagctgtcctggaaccacaagctgtggtcgctctacgtctgctt
ggtacgtctccgctcagcacagatgccgactctgttcttaggggaatttgttttcaggtt
tgcggagcttttgggctggcaaccccctgcccacagacagcaaaatcacatgacaagttg
gtaacgttctttcatgccatgctgcaacaagtgtccaaaaaaggagaaacccttgtgctt
atccttgattctctggaccacctatcacagaccagcaatgctcatacgttgcagtggatt
cccaaagaaattccacccaacgtgcatttagtcatgtcagccctgaaccatggttctccc
ttaaagaaacttaatgaaatgtttaacgatgaaacatttttccttcaagttgagcctttg
acttctggtcaagggcaggccatcattgatgccagtatgagtgctgctggacagagactc
acgtcagaacaggtgcaggctattctccaaagcttccacaagactggaagtcccttacat
cttaaactaattctggacatggcaaagcagtggtcatcctacaccaatatgtctgagatt
tatcttggcagctcagtgcaggaaattatatcattatttctccaaaggctggaaataaag
catggcgagagactggtctgccacgctctgggttacatcagcctatccagatgtggctta
tcggaggcagaacttcgagatgttttgtctttagataacgatgtcctggcagaggtctat
cagagctggcttcctccaagtcacacacttatacgctttcctcctctactttgggcacgc
ctcaaacacgacctaggggattatctaatggaacgatgggaaaatggcattgttgtgttg
gggttctctttaaggaactttaccgagatggttcaggagaggtatcttactgcggagaag
cgggttgaaatgcacattattctcagcgagtacttttcaggccagtggagtcaaggccaa
ctcaaacctatacatttgccttcgctgaaaacccaactaaatgctgacagaaaggtaccc
tgtcagcccctgtggtttactgaaggaatcgccaatcttaggatgctgcacgaactgcct
tatcaccttatacatgcagagaaattggaggaactgtgtaaagcagtgataggtaatctg
gagtggttatattgcaagactctcagctgtggagtggccagtgtaattcaggatctgtca
ctctgtcttgatgtcatggactgtcctgaaatcaagctcatccgtgactgctttctactg
ctgaagcccaccatagattttattgatggacacattgacccatccctcctgttcaccgag
ctatgtgccagacttcaggctctcgcccctgcgtatcactctctgattggatgcctctgc
tctgattgccatgattggtttgcttcctgtccagaccctgtacttgtgcccaagtgtacc
ttcctacaatccccgggagggcctttggaaagcacgctcagtagttttgtaaaaggattt
acagcagtggatgtttgtgccgagagggatttgctgatagcaggttctgtagatggagtg
ctgatattgtgggacctaaaacatctcgaggtgcttcatacacttgtaggacacacaggg
gcggttcagtctgtgaagcttgtacaaggaggtgaccattgcttatctactggacttgat
ggttctcttaagaaatggagtctgcttagtggaaaacagatctactgcatccctgctgca
gtttcagtccagccctggtctgctgaacagatccttgtgtttgagtctagtgccatggtt
ctttctaatgcacaaggacaagtcaaatcatggcatttggacactggtgagctcctttat
gaagctgatgtgaatggagagtgttcgattcttgctggactgggagaggacgtggcagtg
ctgtccagtgatggccagctctggctccatgactcgagcactggtgcacagaaatcccac
agccagctcagctctgaacagggtttcactgtatccactgtcctcacacttcccagacat
gatagactccttgttgcatgccaggaaagatcactgctattggtctcagctactgggact
gtggcagatgttgagcttcttgctccggcttcgtttatgtgcacctctgaggatgagaat
gtgctttttgcaggctgtgagaggacgttggctgtcctgcatgtgaattcagccactgtt
cagaaaactctggaatttcagcatgaggccacagtcttatcagcagtttcttacagcagt
ggaagcaaggtcatcaccggctctcaggatcatgtcatacggctttggggtttaatcact
ggtcagctgctagattgcttcagtggtatgggatctcctgtcaccttcctgtccgtgtac
aacaccataatcatctctgcttcaactacctctgattgctttaaactgtggcagccagaa
tacaatcccaagcacaaaagccagccttgtatccctgccaactgcccgagggtggtcgca
tgcaaagatggcaacactgttcactttatcagaaaagaggacagaaaaaaggtgttcaca
tggagcttttctgatggtgagccaaactgtctgtcccccgacttgatggacgtttcctcc
gaggtgtgctgcatggaactggctcaacagaaacgtctgctcttctgtggcctctgcaaa
ggtaccgttctcatctaccctttagattttgcccaggagactctatgcctgcttcctcca
gaaagcctgcacgctgtgcgcagcatggccatcagttccagggaggacaagatcgctgtg
gcctatgaggatgaggtgtgcttgttcgagatcacagcaagggatagctttccgtgtgtg
gagggtccatcccacagatactccctgtccctgctccactctcctgtgtccgccatggct
ttgctgcccgactgcagactcctgtacggcactcttgggggggaagtggctatctatgac
tttcggagtgcctcagcagcagagctggatcaccatgcgtctgctatcacctgcatcgca
atgagcaactgggatacacacgctctggtcgggtcagcggactgtgtgcagaaactttgg
agtttgaaacccatgatgttggaccataccatggagtacaagggtttttacttcgaaggg
gttctgtgtgctgccttctctgtaaatgataaatatgtgttcactggttctcaggacaaa
accatcaaagtttgggatgtatctacagggtccctcttgtatatccagtacgtctacgcg
gctgttattagaattacaccacacaaggatgggtttgtagccatttcacagaatggttcc
tttattaaggagggctttcactgtccctacactctgccatcagattataacccactccga
aacttcagggctcactatcgtgttacttcacgtgagaaaagtctggaccccactcacaat
ctctttaaagatatccacagttataatccacttcagtttaaccttatgagtgtattgaag
acgaaaaaatccaacacatgtgtggttctatag
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integrated database retrieval system
