Trichomycterus rosablanca: 134331913
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Entry
134331913 CDS
T09921
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
trn
Trichomycterus rosablanca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
FYVE_2
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
134331913
NCBI-ProteinID:
XP_062869524
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All DBs
Position
2:complement(27803745..27828682)
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AA seq
1152 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLRLPPPDRPLPSMPVVLSPAGHAPQPGPTPQAPPPAQGA
GRSQDDAMVDYFFQRQHGEQPGYNNGKHRWPTGDNIHADNQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWESDDSGKDGPKGIFLDQWRDSAWGTSDHSVSQPIMVQRRPGQGFHGV
GEAGSVLSPRSESGGLGVSMVEYVLSSSPAEKLDSCLHKVAFGPRDTETNDSEKRAEPKP
KTTFDPERKELQETEPDPMDNPNGLASQNGLDVDVKDFSRTPGNCPAGPEMELGGADMAG
GTGPKPAEEFSNLEPPNVTLDHMESVSMETLQFDYSGNQLPLDSTAATVGLFDYNSPQQL
FQRSNALAVQQLTAAQQQQYAIAAAQQPHIGLAPAAFMPNPYIISAAPPGTDPYAAGLAA
AATLGPAVMPPQYYGVTPWGVYPANLFQQQAPAPSNSANQQPAAQTQQNQQQVMRTGGNQ
RPLTPSQGQPGQQTDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVVNTG
ARSGPVRLMTPASVIISPTVAAASASGANAGLGGGANGAFRALSSQQAPGQHGGGALGGS
SFYGSGSPSSSSQSSSLFSQGSAQPGSSSLGFNGNPSSSLGATLGATLGGFGTAGMLANS
SASVSRRDSLTGSSDLYKRTPSSLTPIGHGGFYNGLGFSSSPGPVGMPLPNQAPSHSLTP
PPSLSTHGSSSSLNLGTFRRGLTNGSGRFISAAPGAEAKYRSATTGSSLFSPSSQLFPSR
LRYSMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASSA
ERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCR
VIQKALEFIPSEQQVISDMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFK
GQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGR
AEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYT
MMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVD
LGPLCAPPNGIM
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcgtgtgtgttaaagaggaaagctgtgctctggcaggattcgttcagcccc
cacctcagactgcctccccctgacaggccattacccagcatgcctgtggtgcttagtcca
gcgggccacgcccctcaacctggccctactccacaagcccctccccctgcacagggggca
gggcgttcccaagatgatgccatggtagattacttctttcagcggcagcatggtgaacaa
cctggctacaacaatggcaaacaccgttggcctactggagataatatacatgctgataac
caggtgcgatcaatggatgaactcaaccatgactttcaggcgcttgctcttgagggacga
gctatgggagagcagcttctcacaggaaagaaattctgggagtctgatgattcgggaaaa
gacggaccaaaggggatctttctggaccagtggagagacagtgcctggggtacttctgat
cattcagtgtcccagccaattatggtgcagcgccgaccaggtcagggttttcatggtgtt
ggtgaggcaggctctgtactttctccccgttctgaaagtggtggtctaggtgtttctatg
gtggaatatgtcctgagctcatccccagctgagaaacttgattcttgcctgcataaagtg
gcctttggtccaagagatacagagactaatgattctgagaagagagcagagccaaaaccc
aaaaccacatttgaccctgaaagaaaagagctgcaggaaactgagcctgatcccatggac
aaccccaatggattggctagtcaaaatggactggatgtggatgtaaaggacttcagtcgg
acgcctggtaactgtcctgctggtcctgaaatggagttgggtggagctgacatggcagga
ggaacaggtccaaaacctgctgaagaattttcaaatcttgagcccccaaatgtaacactt
gatcatatggaatctgtttccatggaaactctacagtttgactattctggcaatcagctg
cctcttgactccacagcagctactgttggtctttttgattacaactctcctcagcagctc
tttcagaggtctaatgctctggctgtgcagcagctgacagcagcacaacagcagcagtat
gccattgctgcagcccagcaaccacacattggactggctcctgctgcatttatgccgaac
ccttacattatcagtgcagccccacctggcacagacccttatgctgctggccttgctgct
gctgcaactctcggtccagcggtaatgccccctcagtattacggagtaactccgtggggt
gtgtatccagctaacctgtttcagcagcaggcccctgcaccttccaactctgccaatcag
cagccagcagcacaaactcagcagaaccaacagcaggtaatgcgtactggaggtaaccaa
cgacctttgacccccagccaaggtcagcctggccaacaaacagaccagcttgttgctgca
gcagcagtgaactctgccttggcgtttggacaaggtctggcagccggtgttcctgggtac
ccagtccttgctccagctgcatactatgaccagactggagctctggtggtgaatactgga
gctcgcagtggccctgtcagactcatgactcctgcctcagtcatcatcagccctactgtg
gcagctgcctctgccagtggggctaatgcaggccttggcggcggggccaatggggctttt
cgtgcgttaagttcccaacaagctccaggtcagcatggaggtggagctctgggtggaagt
tccttttatgggagtggctctccaagctcctcttcccagagctcatccctgttttcccaa
ggctctgcccaaccaggaagctcctcccttggattcaatggtaacccatcttcgtctctt
ggtgctacacttggagcaacactgggtggttttggtacagctggtatgttggctaattct
agcgccagtgtttctcgtcgggactctttgacaggaagttctgacctatataagcgcacc
cccagcagccttactcctattggtcatggagggttctacaatggtcttggtttcagctcc
tctcctggtcctgttggcatgccacttcccaaccaggctccctcacactctcttactcct
cccccctccctttcaacccatggatcctccagcagtctcaaccttggtacgttccgacgt
gggctaaccaatggcagtggccgttttatctcagcggctcctggagcagaggcaaagtac
agaagtgccactactggctcttcactttttagtcccagcagccagctctttccatcacgg
ctccgctacagcatgtcggatgtgatgccgtctgggcgcagtcgtttgctcgaggatttc
cgcaacaatcgctacccgaacctacagctgcgggagattgcaggccatgtcatggagttc
tctcaggaccagcatggctccaggtttattcagctgaagttggagagagcaagctctgca
gagcgtcagttggtcttcagtgagattctgcaagcagcctaccagctcatggttgatgtg
tttgggaattatgtcatccaaaagttctttgagtttggcagtctggatcagaagttggca
cttgctgagcggatccgtggtcacgtgttgtctttggctctgcaaatgtatggctgtagg
gtgatccagaaggctctggagttcatcccttctgaacagcaagtcattagtgatatggta
cgagaactggatggccatgtgttgaagtgtgtgaaggatcaaaacggtaaccatgttgta
cagaagtgcattgagtgtgtgcagcctcatgctctccagttcatcatcgacgcttttaaa
gggcaggtgtttgctctgtccactcacccctatggctgccgggtgatccagcgtattttg
gagcactgtctccctgaacagactctgcctatactggaagaactgcaccaacacacagag
cagctggtccaagatcagtatggcaactatgtaattcagcatgtattggagcatggccgt
gcagaagacaagagcaagattgtctccgagatcagaggaaacgttctcggactcagccag
cacaagtttgccagtaacgtggtggagaagtgcgtgacacactcgctgcgggctgagcgg
gccatgctgatcgatgaagtctgcagtatggcagatgggcctcacagtgccttatacacc
atgatgaaggaccagtatgccaactatgttgtgcagaaaatgattgacgttgctgagcca
acacagcgcaagatcgtaatgcacaagatccggcctcacattgcgacccttagaaagtac
acatacgggaagcacattctggccaagctggagaagtactacatgaagaatggagttgac
ctgggcccgctctgcgcgccccctaacggcatcatgtaa
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