Trichomycterus rosablanca: 134331940
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Entry
134331940 CDS
T09921
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134331940 (arnt2)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134331940 (arnt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
134331940
NCBI-ProteinID:
XP_062869583
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Position
17:complement(30420748..30468357)
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AA seq
729 aa
AA seq
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MATPAAVNPSEMGTDLPGAVAMAGAVAMAGAVVGAGQVRMAGTMPGRGGKRRSAGMDFDD
EDGEGPSKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMK
SMRGTGNTSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHP
QAEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSR
RSFICRMRCGSAPLDHISLNRLSSMRKRYRNGLGPSKEGEAQYSVVHCTGYIKAWPPAGM
TIPDEDTEAGQTSKYCLVAIGRLQVTSSPVSMDLNGLAVPTEFLSRHNSDGTITFVDPRC
INVIGYQPQDLLGKDMLEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRMKNREWMLIR
TSSFTFQNPYTDEIEYIIGTNTNVKQLQQQQQAELEVHQRDGLTAYDLSQVPVGGVGGGV
HEAGKSLDKTETLFSQDRDPRFSDMFTGISGSDKKMMAPSSTSGGQQLYSQGSPFQPGHS
GKTFSSSVIHVPGVNDIQSAAGSAGQNLAQISRQINPGQVQWSGSRPPFSNQQQLPAQSG
KAQSSPFTIGSSHSYQADPSSYSPLSSPATSSPSGNAYSNLTNRSNAFDVAGESGQSGAQ
FQGRPSEVWSQWQSQHHNQQSGEQHTHTQSNQSEVFQDMLPMAGDPTQGAANYNIEDFAD
LGMFPPFSE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacccgccgccgtgaatccgtccgagatgggcacagatcttcctggcgcagtg
gcgatggcaggcgccgtggcgatggcaggcgccgtggtgggtgcggggcaggtcaggatg
gcgggcaccatgccaggacgagggggcaagaggaggtcggcagggatggacttcgacgat
gaagatggagaaggacccagcaaattctcaagagagaaccacagcgagatcgagcggcgc
cggcggaacaagatgacccagtacatcaccgagctgtcggacatggtgcccacctgcagc
gccctggcacgcaaacccgacaagctcaccatcctgcgcatggccgtgtcccacatgaag
agcatgagaggaaccggcaacacgtccaccgacggggcctacaagccctccttcctcacc
gagcaggagctgaagcacctgatcctggaagcggccgacggtttcctgttcgtggtggcg
gcggagacgggccgcgtgatctacgtgtcggactcggtgacgccggtcctgaaccatccg
caggccgagtggttcggcagcacgctgtacgagcaggtccatcccgacgacgtggacaag
ctccgcgagcagctcagcacctccgagaactccatgaccggccggatcctggacctgaag
acggggacggtgaagaaggaggggcagcagtcctccatgaggatgtgtatgggctcccgg
cgctccttcatctgcagaatgaggtgtggcagcgccccgctggatcacatctccctcaac
cgcctgtccagcatgaggaagagatacaggaacggattggggccgtccaaggagggcgag
gcgcagtactcggtggtgcactgcaccggctacatcaaggcgtggccccccgcaggaatg
accatcccggatgaagatactgaagccggacagaccagtaaatactgcctggtggccatc
gggagacttcaggtcaccagctctccggtctccatggatctgaacgggctcgcggtgcca
accgagttcctgtcccgccacaactcggatggcaccatcaccttcgtggatcctcgatgc
atcaacgtgatcggataccagccgcaggacctgctgggtaaagacatgctggagttttgc
catcctgaagatcagagccacctgagagagagcttccaacaggtggtgaagctgaagggt
caggttctgtcggtcatgtaccgcttcaggatgaagaaccgtgagtggatgctgatcaga
accagcagcttcaccttccagaacccgtacacggacgagatcgagtacatcatcggcacc
aacaccaacgtcaagcagcttcagcagcagcagcaggccgagctggaggtccatcagaga
gacggactgacggcgtacgatctctcacaggtgccagtgggcggggtcgggggcggagtc
cacgaggccggaaagagcctggacaaaacggagacgctcttcagccaggacagagacccg
cgcttcagcgacatgttcaccggcatctccggctccgataagaagatgatggcgccgtcg
tccacctcaggaggtcagcagctctattcccagggcagtcccttccaacccgggcactcg
ggcaagaccttcagttcctcggtgatccacgttcccggggtgaacgacatccagtcagcg
gccggttcggcgggtcagaatttggcccagatatctcgtcagattaacccgggtcaggtc
cagtggtccggcagccggccgccgttctccaaccagcagcagctcccggctcagtccggt
aaagcccagtcgtctccgttcaccatcggctccagccacagttaccaggccgacccgtcc
tcctacagcccgctgtccagcccggccacgtcctcccccagcggcaacgcctactccaac
ctgaccaatcgcagcaatgcattcgacgtggcgggtgagagtgggcagagtggcgctcag
ttccagggtcgaccgtccgaggtttggtctcagtggcagagtcaacatcacaaccaacag
agcggagagcagcacacacacacccagagcaaccaatcagaggtgttccaggacatgctg
ccgatggccggcgaccccacacagggagcggccaactacaacatcgaggattttgctgat
ttggggatgttccccccgttctctgagtga
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