Trichomycterus rosablanca: 134332113
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Entry
134332113 CDS
T09921
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
trn
Trichomycterus rosablanca
Pathway
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134332113 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134332113 (supt20)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
134332113 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
134332113
NCBI-ProteinID:
XP_062869647
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All DBs
Position
18:complement(28157919..28170848)
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AA seq
827 aa
AA seq
DB search
MQNGLEDSLDRAEYIVESARQRPARRRVSSSGRKSLYQKLYELYTEECEKEPELKNLRRN
VNLLEKLVSQEALSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIAEVRDYRQSGNTKVPTYQSRHVLLKPTMQTLICDVHAM
TSDHKWTQEDKLQLESQLILATSEPLCLDPSITVTCTANRLLYNKQKMNTHSMKRCFKRY
SRAALNRQQELLNLPTPPQLRLLDYLHKRKERKPPPVVDLKISKAGNCVDMWKQNNCQLT
VPSEIDVEKFAVAEKSIKLEDSQLTQVWPALDIKDDYVFECEVGGQPQKTKVTVFQSVGN
PQLYGKIFSSKDTKSEEDSPDLHLIHPPFLLGSKVDADRFLAQYKDVYETDVKCEVKISH
SSSSVGAQSHLSPARDAEPDGLSPLLQSSLLGKGVKHKPPPIKLPPGSSNSSSGNSYSTQ
VPSGLLKCPTPPPSKSQSLSRKHSVEVGQVGLLSPSALSPMQRSGTPKPSTPTPTNTPCS
TPHPADVLNTTPLVTPTPQDPAMPQQQALLAPFSQQQMALPVMTIPLPTSISTGTTSSQV
MTNTAGLNFINVVGSVCSPPTLMSGSNPMLGCSPGINLSGILPPGGLMSGTLPTMQPTAS
GGAPFGLNNTQGLRPLNLLQIPAAPLIFNSLQQQQLSQFSPQQQNSQSATSSPQQQGDLT
EQGLTAEQGLAAQQAAVINLAGMGGFMPSQTVLSQLGCGLEGSGSSLPSPRLQHQPQIQL
QFLQHQMQQQMAMAAAAGPQAALPRQHSANQPRSKRKRSLPQPLPKS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacggcctagaagattcattggatcgggctgagtacattgttgaaagtgctcga
caacgaccagctaggagaagagtctcatccagtgggaggaagtccttatatcagaaactt
tatgaactgtacaccgaagagtgtgaaaaagagccagagttaaagaaccttagaagaaat
gtgaatctacttgagaagttggtctcgcaggaggctctctcatgcctggtggtcaattta
taccccggaaatgaaggatactcacttatgctcagaggcaaaaatggttccgattcagaa
acgattcgtcttccgtatgaagaaggagagctgctggagtacttggatgcagaggagctg
ccacctattttggtcgaccttttagagaaatcgcaagtcaatatttttcactgtggctgc
gtcatcgcggaggtccgagattacagacagtccgggaacaccaaggttcccacgtaccag
agccgccacgtactgctgaaacccactatgcagaccctaatctgtgatgtccatgccatg
acgagcgatcacaagtggacacaggaagataagctgcaactggagagccagctgattctg
gccacatcagagcctttgtgtctggacccctccatcaccgtcacctgtacagccaaccgg
ctgctctacaacaagcaaaagatgaacacgcactccatgaaacggtgttttaagaggtac
tcacgagcggcactaaaccgacagcaggagctgctcaacctcccgacgccgcctcagctc
cgtctgctggactacttacacaagaggaaagaaaggaaaccgccgcccgtcgtggacctc
aaaatctccaaggcaggcaattgtgttgacatgtggaaacaaaacaactgtcagcttaca
gtgccgtcagagatcgacgtggagaagtttgctgtggcggagaaatcgatcaaactggaa
gattcccagcttacacaagtctggcctgcactggacattaaagatgactacgttttcgag
tgtgaagtgggcggccagcctcagaagacaaaagtcaccgtcttccagtcagtgggaaac
ccgcagttgtacggcaaaatcttcagcagcaaagatacgaaatcggaagaggacagtcct
gacctgcacctcattcacccaccattcctcctcggttcgaaagtagatgctgaccgattt
ttggctcagtacaaggacgtttacgagacagatgtgaagtgtgaagtgaagatatcgcac
agctccagcagcgtgggagcccagagccacctctcacccgccagagacgctgagccggat
ggtctctcaccgctgctccagtcttcattactgggcaagggagttaagcacaaacctccc
cccatcaaactgccacccggttcatccaacagctcctcaggaaattcctacagtacacag
gtacccagcggccttctgaagtgtccgacccctccccccagtaagagtcagtctctgtcg
cgcaagcactccgttgaggtgggccaggttggcctgctgtcgccctccgccctctcgccc
atgcagagatccggaacgccgaagccgtcgacgcccacgccgaccaacaccccgtgctcc
acgccccacccagccgacgtactgaacaccacaccgttggtcacgcccacgccccaagac
ccggccatgcctcagcagcaggcgctgctcgcccccttctcccagcagcagatggcgctg
cctgtcatgaccatacctctgcccacctccatcagcacaggaaccacgtcctcgcaggtc
atgaccaataccgccgggctgaatttcatcaacgtggtgggctcggtctgcagtcctccg
acgttgatgtctggttcgaaccccatgctgggctgcagtcctggcataaacctgagtggg
attttgcctccaggaggcctcatgtctggcacacttcctaccatgcagcccacagcctct
ggaggtgcaccttttggcctgaacaacacacaagggttacggccgctcaacctccttcag
attcctgctgcaccactgatctttaactctttgcagcagcagcagctctcgcagttctct
ccgcaacagcagaacagtcagtcggccacgtccagcccccaacagcagggagatctgact
gaacagggactgactgctgaacagggtctcgcggcacaacaggccgccgtcattaacctc
gccggcatggggggattcatgccctctcagacagttctatcccagctgggttgtggtctg
gagggctctgggtccagcctgccatccccgaggctccagcaccagccacagatccaattg
caattcttgcaacaccaaatgcagcagcaaatggctatggcggcagcggcggggccccag
gcagcgctgccacggcagcattccgccaaccaaccaagaagtaaaaggaagcgcagcctg
ccgcagccccttcccaaatcgtga
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