Trichomycterus rosablanca: 134332136
Help
Entry
134332136 CDS
T09921
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134332136 (ttc28)
Cilium and associated proteins [BR:
trn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
134332136 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
CFAP70_TPR_C
TPR_MalT
RPN7
TPR_SusR
TPR_16
TPR_14
TPR_NPHP3
TPR_BSK1_C
TPR_11
DUF6340
TPR_9
TPR_6
TPR_17
TPR_19
PUB
TPR_YpiA_C
Motif
Other DBs
NCBI-GeneID:
134332136
NCBI-ProteinID:
XP_062869691
LinkDB
All DBs
Position
18:19356066..19769489
Genome browser
AA seq
2413 aa
AA seq
DB search
MQKPGARREKILPAGSRTPGRAVSSGAEAPIMSKAEFMEKVRRSNEACQHGDFSMAVELY
SEALRADPQNCILYSNRSAARLKLGQHQAALDDAVKARLLNPKWPKAYFRQGVALQYLGR
HADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFVVVSV
IGQELLSASHHGAAVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTAYMQQDL
EVAKTLGDQAGECRAHGNLGSAFFSKSNYREALTNHRHQLVLAMKLKDREAASSALSSLG
HVYTAIGDYPNALASHKQCALLAKQRKDQLEEARELGNMGAVYIAMGDFSSAVQCHEQHL
DIAKEQGDKREESRAYSNLGSAYHYRRDFDKAASYHARVLELAQELEERAIEMRAYAGLG
HAARCMQDLERAKQYHEQQLNIAESLKDRAAEGRASSNLGIIHQMKGDYETALKLHKAHL
SIAQELNDYAAQGRAYGNMGNAYNALCIFDQAVRYHRQELQISMEVNDRASQASTHGNLA
VAYQALGAHDRALQHYQNHLNIARELRDIQSEARALGNLGNFHCSRGEFPQAVPYYEQYL
RLSPDLQDMESEGKVCHNLGYAHYCLGNFQEAVKYYEQDLALAKDLHDKLSQAKAYCNLG
LAFKALGNYNKAEECQKYLLSLAQSLNNSQARFRALGNLGDIFMCKKDVSGAVKFYEQQL
SLAHQVKERKMEASAYAALGAAFRVLQKYDKALGYHTQELEVYQELGDIQGECQAHGHLA
AVYMSLGKYSMAFKCYEEQLELGQRLKDPSVEAQVYGNMGITKMNMGVMEEAIGYFEQQL
AMLQQLSGNEAVLDRGRAYGNLGDCYDSLGDYEEAIKYYEQYLSVAQSLNHMQDQEKAYR
GLGNGHRAMGNLQQSLVCFEKRLVVAHELGGCNNKAQAYGELGSLHSQLGNYEQAISCLE
RQLAIARDTSDQLLEGQASCGLGSVYQLMGEYETALQFHQRDLQIGEETGNAGCQGRAYG
NLGLTYESLCNFERAVVYQEQHLSIAAQTNDLVAKTQAYSSLGRTHHALQNYSQAVMYLQ
EGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHSTDYK
LSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQNSDPYTPVT
VEHILDTVNSQRALVLYYSVAAGYLYSWLLAPGSGILKFHEVYLGEGASESGPSDFQEAG
GGSVHGGGATSLEQHTANAREALGVDAYYSRACSSSETESEAGDLLDQQFEELNNKLNSV
TDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPVKEGSSSLSRRSSALSKPPLRALYDLL
IAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIGS
LGANAKVHPRRAGPALCPGGSSAAVVGNPRLPSSVMERWLWGPMPSAEEEAHMVAELLGC
QPLAGPGATKQRVMSALSQAECAHFATHVSWKLAALVLAPNQDLGTGHGAGTSSGASGGG
ESGGKSSYSIKDDGSDAESVCDSPPLQEFLLTAADILDLRLPVKLVVLGSYQESDSKVTA
DGVVGLTRAFLAAGAQCVLVSLWPVPMAASKMFVHAFYTALLNGTKASAALVDAMKTLQG
SKQFSHPSNWAGYMLIGSDVKLNSPSSLISQALAEILQYPDKARDALRVLLHLVEKSLQR
IQSGQRNSMYTSQQSVENKVGGVPGWQALLSAVGFKLDPGSAGLPAAVFFPMADPGDRLQ
QCSATLQSLLGLPPPALQALCKLITASETGEQLISRLHQVLVQLQSGEKEHDFSLVPIQV
SISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRRTMHFALQSLLALFDSTEL
PKRLSLDSSSSLESLASAQSICQQLPTGYVSAPFSPPCPDSLASDAISVYSLSSIASSMS
FLARPEGSSDVTGQRPRHAGLFTSQRHASVPRSRSSPHGAARGHEDDEYQGFSIISSEPL
GTHCDTLPRPAGHQRGTGRGGAGRGYVASVSSRGSISTPTSPVKATSLIPSASSPFQKTV
KAGNSDTGESDQSSTETDSTVKSQEDRPPAPATPLDPQELAQKILAETQSHMRAVETLQR
SSPGTGDSPKPTGGSAFRCSETSAFSRPSSRASIKSQKLQKISSGYNSPAMSETSLKDSC
QPSPTSDHLHAQFKLKYPSSPYSGHISPSSGHQSPAESAPSPALSYSSTDSTRSSPGDLD
RLKLASIDEKVQAIHNLKTFWASNPHQQQSGPMRAFHSGAKLSTSQKDVLGLLNLSPRHG
KGQDLPGYELQDSQSDPGSRNPPNGHRKMETKGVTPSPTPSTGSSPGSHTIRLPTGNGYK
FISPGRFFPSSKC
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaccaggagcgagaagagagaagattttgccagcgggatcacggacgccaggc
agagcagtgtcctctggggctgaggctccgatcatgagcaaggccgagttcatggagaag
gtccggcgaagtaacgaggcgtgccagcacggcgacttcagcatggccgtggagctgtac
agtgaagcgttgcgtgccgacccacagaactgcatcctctacagcaaccgctcagccgct
cgtcttaaactgggccaacaccaggcagcgctggatgatgccgtcaaagcccgcctgctc
aacccaaagtggcctaaggcatacttccgacagggtgttgccctccagtatttgggccgg
catgcagatgctctggccgcttttgcctccggtctcgcgcaggaccccaagagcctgcag
cttctggtcgggatggtggaggccgccatgaagtcgccactacgagaatctttggagccg
acctatcagcaattgcagaagatgaagctggacaagagcccgttcgtggtggtgtctgtg
atcggccaggagctcctgagcgcctctcatcacggcgctgcggtggtggttctagaggcc
gcgttgaagatcggcacgtgcagcctcaaactgcgtggttcggttttctcagccctcagc
agcgcctactggtcactgggcaacaccgagaaaagtactgcctacatgcagcaagacctg
gaagtagccaagactttaggtgaccaggcgggtgaatgcagggctcatgggaacctcggg
tcagccttcttctccaagagcaattaccgagaggccctgaccaatcacagacaccagctt
gtcctggccatgaagctaaaggacagagaggcggcatcgtcggctctgagcagtctgggc
cacgtctacaccgccatcggtgactaccccaatgcactggccagccacaagcagtgcgct
ctactcgccaagcagcgaaaggaccagctagaagaggcacgcgaactgggcaacatgggg
gccgtctacatcgccatgggtgacttctccagtgccgtacaatgccacgaacagcatctg
gacatcgccaaggagcaaggagacaagcgcgaggagtcacgtgcctacagcaacctgggc
agtgcttaccactaccggcgtgacttcgataaggccgcgtcgtatcacgcgcgggtgctg
gagctggcgcaggagctggaggagcgggccatcgagatgcgggcgtacgccggtctgggc
cacgccgcacgctgcatgcaagacctggagcgcgccaagcagtaccacgagcagcagctc
aacatcgcggagagcctgaaggaccgcgcggccgagggacgcgcctcctccaacctagga
atcatccaccagatgaaaggagattatgaaacggctctgaaacttcacaaagctcacctc
tccattgctcaggagctcaatgactacgccgcccagggcagggcctacggcaacatgggc
aacgcttacaatgctctatgtatcttcgaccaggctgtgcgctaccaccgacaggagcta
cagatctcaatggaggtcaacgaccgcgcctcgcaggcctctacccacggcaaccttgct
gtagcctatcaggccttgggggcgcatgaccgagccttgcaacactaccagaaccatctg
aacatcgcccgtgagctccgcgacatccagagcgaggctcgtgctctggggaacctggga
aacttccactgctcgcgaggggagttcccccaggctgtgccatactacgagcagtatcta
cggctctcaccggacctgcaggacatggaaagtgagggcaaggtttgtcacaacttggga
tatgcacattattgcctggggaacttccaggaagcggttaaatactacgagcaggacctg
gctctggctaaagacctgcatgacaagctgagtcaagccaaagcttactgcaatttaggc
ctggcttttaaagcactcggcaactacaataaggctgaagagtgccagaagtacctcctg
tccttggctcaatcactaaacaactcgcaggctaggttccgtgctcttggaaatctaggt
gacatctttatgtgcaaaaaagatgtgtctggtgccgtaaagttttacgagcaacaatta
tcgctggcccatcaggttaaggagcggaagatggaagccagcgcttatgccgcattgggt
gctgccttcagagtgcttcagaaatatgacaaggctctcgggtaccacacgcaagagctg
gaggtttaccaggagctcggggatatccaaggtgagtgccaggctcacggacacctcgca
gctgtgtatatgtctctggggaagtacagcatggccttcaagtgctatgaggagcagtta
gagttgggccagcggctcaaggaccccagcgtggaggcccaggtctatggcaacatgggc
attacgaaaatgaacatgggggtgatggaagaggccatcggatatttcgagcagcagctc
gccatgctccagcagctcagcgggaacgaggcggtgctggaccgcggccgtgcctacggc
aacctcggggactgctacgactctctgggcgactacgaggaagccatcaagtactacgag
cagtacctgtctgttgcgcagagtctcaatcatatgcaggaccaagagaaagcctacagg
gggttgggtaatggacacagggctatgggcaacctgcagcaatcacttgtctgctttgag
aaacgtctggtggtggcccatgagcttggcgggtgcaacaacaaggcacaggcttatggc
gagctgggcagcctccacagccagctgggcaactacgaacaggccatctcatgcctggag
cgacaactggctatcgcccgtgacacctccgatcagctcctggaaggccaggccagctgt
ggcctgggttctgtttaccagctcatgggcgagtatgagacagcgctgcagttccatcag
cgggacctacagatcggagaagagaccggaaacgcaggctgtcaaggacgggcctacgga
aacctgggcctcacctatgaatctctgtgcaacttcgagcgagcggtggtgtatcaggag
cagcacctgagcatcgcagcacagaccaacgacctggttgccaagacacaagcctacagc
agtctgggtcgcactcatcatgccctgcaaaactactcacaggctgtcatgtacctgcag
gaaggtctgcgtctggcggagcagctgggccggcgtgaagatgaggccaaaatccgtcac
cgtctgggcctctcactgtgggccagcggtaacctggaggaagcccagcaccagctgtac
cgtgcctctgctttgtttgagaccattcggcatgaagctcagcacagcaccgactacaaa
ctctccctgttcgacctccagacctcttcgtaccaggctctccaaagagttctagtcagc
ctcggtcaccatgacgaggcgctggcagtggcggaacgaggccgaacacgggcttttgct
gacctgctggtggagcggcagacaggccagcagaactcggacccgtacacccctgtcacg
gtggagcacatcctggatacagtgaacagccagcgggccctggtgctgtactactcagtg
gctgctgggtacctttacagttggctgcttgctcccggttcaggaatcctcaagttccat
gaagtgtacctgggcgaaggcgcttccgagagtgggccgtctgatttccaggaggccggc
ggtggttcggtgcatggaggaggtgccacgtccctggagcagcacactgctaatgccaga
gaagctctgggagttgatgcctattacagcagagcatgttccagcagtgaaactgagagc
gaggcgggagatctcctggaccagcagttcgaggagctcaacaacaagctcaactcggtc
accgatcccactggcttcctcagaatggtttccaggaacaacctctttaacaggagctgt
cagagcatgacaagtctgttcagtaacacagtctctccggtgaaagaaggaagctcctct
ctgtcccgtcgctccagcgctctgagcaagcctcccctccgcgccctctatgacctcctc
atcgctcctatggaggggggtctgatgcattccagtgggccggtgggcaggcacaggcag
ctggttctggttctggaaggcgagctctatctcattccattcgccctgctgaagggcagt
tcatccaacgagtacctgtacgagcgcttcagcctcatagccgtgccctccatcggtagc
ctgggagccaatgccaaggttcacccccggcgtgctggcccagcactgtgccctggaggc
agctccgctgcagtagtaggcaacccgcgtctgcccagctcggtgatggagcgctggctc
tggggcccgatgccctcagctgaggaggaagcccacatggtagctgagctcctgggttgt
cagcctctggccggcccgggtgccaccaagcagcgggtcatgagcgccctaagccaggca
gaatgtgcccactttgccacacatgtctcctggaagctggcagccctggtgctagcgccc
aatcaggacttaggcactgggcatggtgcaggtacatcatctggggcatcagggggtgga
gagagcggtgggaagtctagctacagcatcaaggatgacggcagtgatgcggagagtgtg
tgcgacagtccgccactgcaggagttcctgctcacagccgcagacatcctggaccttcgg
ttgccggttaaactagtggtgctaggttcctaccaggaatcagacagtaaggtgacggcg
gacggggtggtaggactcacccgggcttttttagcagcaggcgctcagtgtgtcctggtg
tctctgtggcctgtgcctatggctgcctccaaaatgttcgttcacgctttctacacggcc
ctgctgaacggcactaaggccagcgccgccctcgtcgatgccatgaaaacactacagggc
agcaagcagttttctcatccatccaactgggcaggctacatgctgatcggcagcgatgtg
aagctgaacagcccctcgtctctgattagccaggccctggctgagatcctgcagtaccca
gataaagccagagatgcgctcagggtcctgctgcacctggtggagaagtctctgcagcgc
attcagagtggtcagcgtaactccatgtacacgtctcagcaaagcgtggagaacaaggtc
gggggcgtaccgggctggcaggctcttctcagtgctgtgggtttcaaactggacccgggc
agtgcaggcctcccagccgccgtcttcttccctatggccgatcctggagaccgactgcag
cagtgcagcgccaccttgcagtctctgctcggtctgccccctcctgccctccaggctctg
tgtaaactcatcacggcttctgagaccggagagcagctcatcagcaggcttcaccaggtg
ttggtccagttgcagtcgggtgaaaaggagcatgatttctcactggtgcccatccaggtc
tccatcagtgtgcagctctggaggctacctggctgccatgagttcttggcagctctgggg
tttgacctgtgtgaggttggtcaggaggaggtggtgctgaagaccggaaaacaggccaat
cgccgcaccatgcactttgccctgcagtctttgttggcgctgtttgactccaccgaactg
cccaagcgcctcagcctggacagctcctcatccctcgagtctctggcctctgcccagtct
atttgtcagcaactgcccacgggctacgtcagtgctcccttctcccctccctgccccgac
agcctggcctcagatgccatctctgtctacagcctgagctctattgcctcatccatgagc
ttcctggcacggcccgagggcagctcagacgtcaccgggcagcgtccccgccatgccggc
cttttcacctctcagaggcacgcctctgtgccacggagccgctcctcgccgcacggcgcc
gcccggggccacgaggacgacgagtatcaaggcttcagcatcatcagcagtgaacctctg
ggcactcactgcgatacactcccgcgaccagccggccatcagcggggaacagggcgtgga
ggtgcgggcaggggatacgtagcatccgtgtcatcaaggggcagcatcagcaccccaacg
tcaccagtgaaggcgactagtctgattcccagtgccagttcgccttttcagaagactgtc
aaggcaggcaactcggacactggcgaatcagaccagtccagtactgaaacggacagcacg
gtgaaatcgcaggaggaccgtccaccggcgccagcgacgcccctggacccacaggagctg
gcacagaagatcctagcagagacacagagccacatgcgggcagtcgagaccctgcagagg
agtagccctggaacaggcgattccccgaaacctaccggaggctccgccttccgctgctcg
gagaccagtgcttttagtcggcctagcagcagagccagcataaaatcacagaagcttcag
aagatcagctcggggtacaacagccctgccatgtcagagacatcgctgaaggacagctgt
cagccatcaccaacatctgaccaccttcacgcccagttcaagcttaaatatccaagctca
ccttacagtgggcacatctctcccagctcaggccaccagtcaccagctgaaagtgccccc
tccccggctctgtcctattcctctaccgactcaacgcgttccagtccaggtgaccttgac
cgccttaaactggcttccatcgacgagaaagtgcaggctatccacaatctaaagacattt
tgggccagcaaccctcatcagcagcagtctggaccaatgagggctttccacagtggagcc
aaattaagtacttcccaaaaggatgtcttaggtcttcttaatctgtccccgcgccacggc
aagggtcaagacttgcccggttacgaactgcaagacagtcagtcagatcctggctccaga
aacccgcccaacggccatcggaagatggagacgaaaggggtcaccccttcacccacgcct
tccaccgggagtagccccggttcccacactatcagactgcctactgggaacgggtataaa
tttatctcccctggaagattctttccctcatcgaaatgctga
DBGET
integrated database retrieval system
