Trichomycterus rosablanca: 134332189
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Entry
134332189 CDS
T09921
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134332189 (sbno1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134332189 (sbno1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134332189
NCBI-ProteinID:
XP_062869791
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Position
18:21141666..21173536
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AA seq
1389 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFEFDSQDTAQSPALQQSVSKNVLDFGLCSEPTSVIGLE
PTVPPTPTITIRKPQPSTTTFVLNQLNQLPSLGSIVVTKPSAGTSSRQTITVTKVVQTPA
LVQRSLSSSSATSVCTVVPPNKDQIKLKDLLRTGNLKTNSLGELMKLKPPPDIAQPVATA
TGTTEVNNGIKKEVSSKDVARIWANDEIKVRSFSPVNIPAMKEEDEPEEEEEEELGHAET
YAEYMPMKLKIGERHPDPVVETSSLSSVNPPNVWYRLSIPEETIDRGWLSALQLEAITYA
CQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIFENYLLGRKRSLWFSVSNDLKYDAER
DLRDIGAKNIQVYSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFKQL
LHWCGDDFDGVIIFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFQGV
TFKIEEVPLTHDYIKMYNKSVRLWVSAREKFQQAANLMDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRQKLYSLLGIDLSAKKTPSPAETKEEQKGKKRKGAEVKKQVKKARKSG
GLSGSSSESNSEDSDKDRDSDDSFNSVSSGDEDDFNPFKDDSSEDEEDDPWLFRKDTKKG
KDKKNKKKKKTIDPDSIQSALLASGLGSTRPTFTTTPVVKPTSNNTLVPAKSQPEESSCV
TSNDAVEDAQQMKRVLLEQLEKLAQDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDD
GSISYESRSELDVPVEILNLTEKQRFMDGEKNISIISEAASSGISLQADRRVKNQRRRVH
MTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHG
DRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPLVNPPSGFQGDFFKEIRSGLIGV
GLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTLNAVIQNAKRNGRY
DMGILDLGSGDEKVKKMNVKKFLTPGYSTSGHVELYTVSVERGMSWEDATHVWADQNGPD
DGFYVQIRNNKKIAILVKEVNTKKRLFMVYRPNTGKQLKLETYVDIRKRCKKVLSDDAKQ
CWTDQYRSSAEVCSHAYWRGNCKKASVGLQCEIGLRCRTYYVLCGSVLSVWTKVEGVLAS
VSGSNMKMQIVRLRTEDGQRIVGLIIPANCVAPLTNILSSSDQSQQLAVQQQQMWQQLHP
QSISHSVNT
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggacaagacttacttcttgcagcccttagtgaaagtggaatctgcccaaat
gacctattcgagtttgattctcaggacactgcccagtcccctgcattacaacagtcggtc
tcaaaaaatgttctcgactttggcctgtgcagcgaaccaactagtgttatcggacttgaa
cccactgtgccacctacacccaccatcacaatcagaaagccccagccctcgaccacaaca
tttgtcctaaatcaactgaaccagctgccatcattgggaagcattgtcgtcacgaagccc
tcagcaggaacctcgtccagacagaccatcacggtaaccaaagtggtccagactccagcg
ttagtccagcggagcctgtcctcttcatccgccaccagtgtgtgcactgtggtcccacca
aacaaggaccagattaaacttaaggacttgctaaggactggcaacttgaagacgaacagc
ctgggtgagctcatgaagctgaaacctccgcctgatattgctcagcctgttgccacagct
actggaacgacggaggtaaacaacggcataaagaaagaggtgtcgagtaaagatgtcgcc
agaatctgggccaacgatgaaatcaaagtccggagcttttcacctgtaaacatacctgca
atgaaggaggaagacgaaccagaagaggaggaagaggaggagttggggcatgctgagaca
tacgctgaatacatgcccatgaaattgaaaataggagagcggcatcctgaccccgtggta
gagaccagctccctctcgagtgtcaaccctcctaacgtgtggtacaggctttccatcccg
gaagagactatcgacagaggctggctgtctgctcttcagctggaggcaatcacatacgca
tgtcagcaacatgaaacattccttccaaatggagacagagcagcgtaccttatcggtgat
ggtgctggtgttggaaagggcagaaccattgctggcattatttttgaaaattatcttttg
ggcaggaaaagatctctctggttcagtgtctcaaatgacctaaaatatgacgcagagcga
gacttaagggatattggtgcaaagaacattcaggtctattcattaaacaagtttaaatat
ggaaaaatatcttctaaacacaacggaagtgttaaaaaaggtgtcatctttgccacgtac
tcgtccttgatcggagaaagccaaagtggtggaaaatacaagacaagatttaaacagtta
cttcattggtgtggagatgactttgatggtgtgatcatttttgatgaatgtcacaaagcc
aaaaatgtttgcccaattgggtcatcaaaaccgaccaagactggactggcagttctggag
ctccaaaacaagcttccaaaagcaagagttgtgtatgccagtgctacaggagcctctgag
cctcgaaacatggcttacatgaatcgtcttgggatctggggggaaggaactccttttaag
gagtttacaaattttattcaggctgttgaaagaagaggagtcggtgccatggagattgtg
gccatggatatgaagttgagaggcatgtacattgctcgacagctgagtttccagggtgtg
acatttaagatcgaggaagttcctctgacacatgactacatcaagatgtataacaagtca
gtccgtctgtgggtgagtgccagggagaaattccagcaagcagctaacctgatggatgct
gaacagcgcatgaaaaaatcgatgtggggacagttttggtcagcacaccagaggttcttc
aagtacctgtgtatcgcctccaaggtgcgacgagtggtgcagctggcccgagaggaggtc
aagaacggaaagtgtgtggtcattggcctgcagtcaacaggtgaagcacgaacgcttgaa
gccttagaggaaggaggaggcgagcttaacgactttgtttcgactgcaaagggtgtgctc
cagtcactgatagagaagcacttccctgctccagacagacagaagctctatagcttgctg
ggtattgatctgtctgcaaagaaaacaccttcaccagcagaaaccaaagaggagcagaag
ggcaaaaagcgcaaaggtgcagaggttaaaaagcaagtaaagaaggcccgtaaatctgga
gggctttctggaagcagctcggagagcaactccgaagattcagacaaagatcgtgacagt
gacgacagcttcaattcagtcagctcaggagatgaagacgacttcaatccctttaaggat
gattccagtgaggatgaggaagatgatccttggttattccgtaaagacactaaaaagggc
aaagataaaaagaacaagaagaagaaaaagaccatagacccagactccattcaaagtgcc
ttgttagcctctgggcttggttcaaccaggcctaccttcacaacaacacctgttgtaaaa
ccaacgtccaacaacacactggttccagctaaaagtcagcctgaagagagtagctgtgtg
accagtaacgatgcagtagaagatgcccagcagatgaagagggttctgctggagcagtta
gagaaactggctcaggatctgcctcctaacacactggatgaactcattgatgagctaggc
ggtcctgaaaacgtagcagagatgaccgggcgcaagggcagagtggtgagtaacgacgat
ggcagtatctcctacgaatccagatcagaactggacgttcctgtagaaatcctgaacctc
accgaaaagcagagattcatggatggagagaagaatatttccataatctctgaggcagcc
agctctggtatatcacttcaagcagaccgtcgagtgaagaaccagaggagaagggtacac
atgactttagagctgccctggagtgcagacagagctattcagcagttcggtagaacacac
agatcgaaccaggtcactgcccccgagtacgtcttcctcatctctgaacttgctggagaa
caaagatttgcctccattgtcgccaaacgactagagagcttgggtgctcttactcacggt
gaccgaagagccacagaaacgagagacctcagccggttcaactttgacaacaagtatggc
cgaaatgctctcgagattgttatgaagtccattgtcaatttggattctcccttggtcaac
ccaccatccggcttccaaggtgatttctttaaagaaatccggagtggtttaattggggtg
ggattgattaatgtggaggataggtctggtgttctctctctagataaagattacaacaat
attggaaaattcctgaatcgaattcttggtatggaggtccagcagcagaatgccctcttc
cagtatttctcagacaccttaaatgctgtcattcagaatgccaaaaggaatggcagatac
gacatgggaattttagatttgggctctggagatgagaaagttaaaaagatgaacgtgaag
aagtttttgacaccagggtactccacatcaggacatgttgagctttatacggtgagtgta
gaaaggggaatgtcttgggaagatgccacgcatgtgtgggcagatcagaacggcccagac
gacggcttctatgtgcagatacggaataacaagaaaatagccatcttggtcaaggaggtc
aacactaaaaagagactcttcatggtgtacagaccaaatacaggaaaacagctcaaactg
gagacatacgtagacattcggaagagatgcaaaaaggttctttccgatgatgccaagcag
tgctggactgatcagtatagatcttcagcggaggtgtgctctcatgcttattggcgtggc
aactgtaagaaagcttcagtagggctgcagtgtgagatagggttgcggtgccggacatac
tacgtcctgtgtggctctgttctcagcgtgtggaccaaagtagaaggcgtcttggcttcc
gtcagcgggagcaacatgaagatgcagattgtccgtttaaggactgaggacggacaacga
atagtaggcctaatcattccagcgaactgtgtggctcccctcaccaacatcctgtcctcg
tcagatcagtcgcagcagctggctgtgcaacagcaacagatgtggcagcagctgcaccca
cagagcatcagccactcggtcaacacatag
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