Trichomycterus rosablanca: 134332201
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Entry
134332201 CDS
T09921
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134332201 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134332201 (rsf1b.1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
134332201 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
134332201
NCBI-ProteinID:
XP_062869816
LinkDB
All DBs
Position
18:13306650..13327538
Genome browser
AA seq
1879 aa
AA seq
DB search
MAASAAAEASASGLCPSFAVICSFLERYGTLLDLPELTFPQLERYLQDTSSVPKLLVDLH
VKLLRKIGKSVSADRWEKYLIRVCQEFNTTWAWELEKKGYQELTLECKTGILKYLCECQF
DENVKFKTAINEEDPDKMRLQPIGKDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRNRDDLAQILGLLKTQIDPSLLVKKDEEKGSASNSPRPEDEEEKKKEDDGEDNEEKELD
KDKSKDASPKTETDEDFGKSQVVKKGTLEVKDLQEDGKKIKEVKAEVNQTIIKAVKEEPM
EEDGAQKSLSEIPLEKNNGPLPSEQEVVRNKSADEIQRAIKNDQQAKIPLKKREMKRSED
FDAISTGSSIIVRNPAVKQVPDSRNENGLSSDKFNGDVSPDAKKESQIKQKEATTDVSKV
QEISENKQDNQKENISKDKSLETSQEKPMEVDEHDSKKATPVTKGDQEMPPKQEASESTE
ISSKTEAMQLAKDASSSMDLEDGSNPPNKEVPERSTVIETTVTSKPPSENVSVIMNEGIL
SSKEIGQHGKDQKIKDHSDETEKEQESSQGSKESKCSHQRSEKIIINTDIRTADKSSTAE
DTKTELSPADKPSNTITEEPQKTESASESKLPKESQRPAIEDNKEHDALTEKENKSSESL
STSKLPEENQRPATEDNKDASNEKENKSSESLSTSKLPEENQCPATEDNKDASNEKENKS
SENSSTSKLPEENQRPAIEDKNKHDALDEKEKKSLENSSTSKLSEENQRPAIEDNKEHDA
LKEKEDKSSENLSTSKLPKESKLSKENQRPAIEDNKEHDALKEKENKSSENSSTSKLPEE
NQRPAIEDKNKHDALKEKENKSSENSSTLKLHEENQHPAIEDKHKHDALIEEENKSSENS
TTSEKLEKPVSHTEEKPSVIKSTLEEKRIKDSTVKESLKSDGTVLGTTTQETDQSSKETD
QKKDSISKDESQTSQEQPMEVDEHDSKKETEVTKGDQEMSPKQEASESAKISFSKETDPS
ATKVESTDQEKENMKQNDLKKMIDPLSAKDSNTEPLKEVVVDKEETKDVPSESKEIKEHK
VSVVKGPTCDASSVDCNAESQKETPSKKDDQEKPPEENMEASNSNRSEKDQSDGEQKVIS
KEASITDKATEENKPEKNHEAETTTSKGGADNVAVQKSRRRVKGLTRRRKAELQRVDGKG
DSESDASEGRCLRRSPRICKPTAKAAEIQDRKVDKKQVTPSAQKEKEESDEKEEEEITVQ
KKPREKKDDPEGQTKKKQGRRRKRTSWSNTRTRRKKKASDDDDYEDDSSSEEEETEEDDS
DEDYKYERTRKRRRNRNKQRNSSDSSTSCSDEDLPNDDPCKHCGLPNHPELILLCDSCDS
GYHTACLRPPLMIIPDGEWFCPPCQHKLLCDKLEEQLLNLDAVLKKKDRAERRKERLVYV
GISVENIITPSVEVEEEKEQEVVKEKKDVKKIKSWGRRSTRAKKCISYRFDEFDEAIEEA
IEEDIKEAEGGGAGRGKDMANITGHRGKDISTILQEEGKENGRPRRPNAAHRRKKRRRLN
DLDSDSTVEEEESEEEFRLSNSSDEDEFVASDNETEAQSLGDSDFDSDGDGPAKKKRSWK
PAKRINTRPQRKRRRPRGYSDDEELEETEEEEEEMVTEGSSDFSDSDLDMRRRRSHRSQK
KEVNYCEASESDGSQAGTKPKKHRRLTSSGSDTSFHSADSDGDGSASEKRKRDLALEESR
KQRQRLSLKRRRESEEDDDSSDSDESDEDDRPVRKRVNRIDSDDSEEEEAEKKSTEKEAD
DGAEAPPTNGQSPVKNLEGSGADPTPVTQIENKSSSTPTPGANGLVSQETPQQDEDEDDL
LGVTDLVDYVCNSEQLKQS
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcagcagcggaggcttctgcatcgggattgtgcccgagctttgccgtc
atttgttcatttctggagcgctatgggactctcctggatctaccggagctcacgttccct
cagctggagcgctacctgcaggacacgagctcagttcctaagctgttggtagacctgcat
gtgaagttgctgcggaaaataggcaaatctgtttctgcagacagatgggagaagtacctt
ataagggtatgtcaggagtttaacaccacatgggcatgggaacttgaaaaaaagggctat
caggagttgacgttggagtgtaagactggaattcttaagtacttgtgtgaatgccagttt
gatgagaatgtaaagttcaagactgccatcaatgaagaagatcctgataaaatgcgcctc
cagcccatcggcaaagacaaggatggtctcatgtattggttccagctcgatcaggatcat
aacgtacgggtctacgtggaggagcaggatgatctagatggctcatcgtggaaatgtatc
gttaggaacagagacgatttggctcagatccttggactgcttaagactcagattgatccc
tcgctgcttgtcaaaaaggatgaggagaaagggtcagcgagtaacagcccgagaccagag
gacgaagaggagaagaaaaaagaggatgatggggaggataacgaagaaaaagaattagat
aaagataaatcaaaagatgcatctcccaaaactgaaactgatgaggattttggaaaatct
caagttgtaaagaaaggaactttagaggtaaaagacttgcaagaagacggcaaaaaaatt
aaagaagtaaaagctgaagttaatcaaactattattaaagcagtcaaagaggagcccatg
gaggaagatggagcacagaagagcttatctgagatacctttggaaaagaacaatggtcca
ttaccttcagaacaagaggtggtgaggaataagtctgcagatgaaatacagagagctata
aagaacgaccagcaggctaaaatccctttaaaaaagagagagatgaagcgaagcgaggat
tttgacgccattagcactggcagcagtattatagtgcgtaatccagctgtaaaacaagtt
ccagattccaggaatgaaaacggattgagcagtgataagttcaacggggatgtctcacct
gacgctaagaaagaatcacagataaagcaaaaagaagcaaccactgatgtttctaaagtt
caggaaataagtgaaaacaagcaagataatcaaaaggagaacatttcaaaagataaaagc
ctagaaactagccaagaaaaaccaatggaagtggatgaacatgattccaagaaggcaact
ccagtcacaaaaggggatcaagaaatgccaccaaagcaagaagcttctgaatcaactgaa
atctcatccaaaactgaagcaatgcagctggcaaaagatgcatcatctagcatggattta
gaagatggttcaaatccccccaacaaggaagtacctgaaagatctacagtaattgagacc
acagtaacatctaaacctccaagtgaaaatgtgtccgtcataatgaatgagggcatacta
tcttctaaagaaatagggcagcatggcaaagaccagaaaataaaggatcactcggacgag
actgagaaagaacaagaaagttcccagggctctaaagaatctaagtgctcccatcagagg
agtgaaaaaatcatcatcaatacggatatccgaacggcagacaagtcctccactgctgaa
gacacaaaaacagagctcagtcctgctgacaaaccatcaaacacaattactgaggaacct
caaaaaactgaatcagcctctgagtcaaagcttcctaaagagagtcaacgtccagccatt
gaggacaacaaagaacacgatgctttaacagaaaaagaaaataaatcttcagaaagttta
agtacatcaaagcttcctgaagagaatcaacgtccagccactgaggacaacaaagatgct
tcaaatgaaaaagaaaataaatcttcagaaagtttaagtacatcaaagcttcctgaagag
aatcaatgtccagccactgaagacaacaaagatgcttcaaatgaaaaagaaaataaatct
tcagaaaattcaagtacatcaaagcttcctgaagagaatcaacgtccagccattgaggac
aaaaataaacatgatgcgttagatgaaaaagaaaagaaatctttagaaaattcgagtaca
tcaaagctttctgaagagaatcaacgtccagccattgaggacaacaaggaacatgatgct
ttaaaggaaaaagaagataaatcttcagaaaatttaagtacatcaaagcttcctaaagaa
tcaaagctttctaaagagaatcaacgtccagccattgaggataacaaagaacacgatgct
ttaaaagaaaaagaaaataaatcttcagaaaattcaagtacatcaaagcttcctgaagag
aatcaacgcccagccattgaggacaaaaataaacatgatgctttaaaggaaaaagaaaat
aaatcttcagaaaattcaagtacattaaagcttcatgaagagaatcaacatccagccatt
gaggacaaacataaacatgatgctttaatagaagaagaaaataagtcttcagaaaactca
actacatctgaaaaactagagaaacctgtctctcacactgaagaaaaaccttcagttatt
aaatcaacacttgaagaaaaaaggattaaagactccacagtcaaagagtctttaaaatct
gatggtacagtattaggtacaaccacacaagaaacagatcaaagctcaaaagaaactgac
caaaagaaggacagcatttcaaaagatgaaagccaaacaagccaagaacaacccatggaa
gtggacgaacatgattccaagaaggaaactgaagttacaaaaggggatcaagaaatgtca
ccaaagcaggaagcttctgaatcagctaaaatctcattctcaaaagaaactgatccatca
gctactaaggtagaatctacagaccaggaaaaagaaaatatgaaacaaaatgatttgaaa
aagatgattgatcctttgtcagccaaagactccaatactgagcctcttaaagaagtagta
gtggacaaggaggagacaaaggatgtcccttcagaatcaaaagaaataaaagaacacaag
gtgtcagttgtgaaaggtccaacctgtgatgcctcctcagtggattgtaatgctgaatct
cagaaagaaacccctagcaagaaagatgatcaggaaaagcctcctgaggagaacatggaa
gcatcaaattctaataggtctgaaaaggaccagtcagatggtgaacagaaagttatttca
aaggaggcgagcattactgataaagctacagaagaaaataaacctgagaagaatcacgag
gccgaaacaacaacgagtaaaggaggagctgataacgtggcagtgcaaaaatcaagacgg
agggtaaagggccttactcgcagacgaaaagcagagctacagcgagtagatggtaagggg
gactctgagtctgacgcaagcgaaggaaggtgtctaagacggtcaccaaggatttgcaaa
ccaacagccaaagcagcagaaatccaagaccggaaggtggacaaaaaacaggtcacaccc
tcagctcagaaggaaaaagaggaaagtgatgaaaaagaggaagaagaaattacagtgcag
aagaaaccaagggagaagaaggatgatccagagggtcaaactaaaaagaagcagggcaga
cgtcgaaaaagaacgtcatggtccaacacccgcacacgacgtaaaaagaaagcctccgat
gacgacgattatgaagacgacagttcgagtgaggaagaggaaactgaggaggatgacagt
gatgaggactacaagtacgaaagaaccagaaagagaaggaggaaccgcaacaagcagcgg
aacagctctgattcatctacctcatgttcagatgaagaccttccaaatgacgacccctgt
aaacactgtggcctacccaaccacccagagctgattttgctgtgtgactcatgtgacagt
ggttatcacacagcttgtctccggcctcctctcatgattatccccgacggtgaatggttc
tgtccaccttgccaacataaattgctctgtgacaaactggaagagcagttactgaatctg
gatgcggtacttaaaaagaaagatcgtgctgagagaaggaaggagcgattggtttatgtc
ggcattagcgtcgagaatataatcacaccttctgtcgaggtagaggaagaaaaagagcaa
gaggtggtgaaagagaagaaggatgtcaagaagattaagagctggggccgaagatcaaca
agagcaaagaaatgtataagctacaggttcgatgagtttgatgaagccatcgaagaagca
attgaagaagatattaaagaggctgagggaggaggagcaggtagagggaaggacatggcc
aatatcacaggccacagaggaaaggacatatccaccattttacaggaggaaggaaaggag
aatgggcgacccaggcggccgaatgcggcacatcggaggaaaaagcggcgacgccttaat
gacctggacagcgacagcaccgtggaagaagaagagagtgaggaagagttccgtctcagc
aacagtagcgatgaggacgaatttgtggcatctgataacgagactgaggctcagtccttg
ggtgacagcgactttgacagtgacggcgatggaccggccaaaaaaaagcgatcttggaaa
cctgcaaagcgaataaacacacgaccacaacgcaagagacgtagacccaggggctactct
gatgatgaagagcttgaagagactgaggaggaagaagaagaaatggtgactgagggttcc
agtgatttcagcgacagtgatctagacatgcgcagacgtcgttcccaccgaagccagaag
aaggaagtcaactactgcgaggcatctgagtctgatggttcccaggcaggcactaaaccc
aagaagcacagacgtctaacaagctctggaagtgatacgagtttccactctgctgactct
gatggagatggcagcgcgagtgaaaagcggaagagggacttggctttagaggaatctcgg
aaacaacggcagcgtctttcgctcaagcgcaggagggagtctgaggaggacgatgacagc
agcgattcagacgagtccgatgaagacgatcggcccgtgcgtaagcgggtaaacagaatc
gattcggatgacagcgaggaggaagaggcggagaaaaaaagcacagagaaggaggccgac
gacggagcggaggcgcctccaactaacggacagagcccagtaaaaaacctcgagggatcg
ggggctgaccctactcctgttactcaaattgaaaataaaagcagcagcacgccaacgcct
ggtgccaacggccttgtttcccaggagacgccacagcaggatgaggatgaggatgatctt
ttgggggtcacagaccttgtagactatgtctgcaacagtgaacagttgaaacagtcatga
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integrated database retrieval system
