Trichomycterus rosablanca: 134332213
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Entry
134332213 CDS
T09921
Name
(RefSeq) m7GpppN-mRNA hydrolase-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134332213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134332213
Enzymes [BR:
trn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
134332213
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134332213
mRNA degradation factors
5'-3' decay
Decapping complex
134332213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carb_anhydrase
DCP2
NUDIX
NUDIX_4
Hemotin
Motif
Other DBs
NCBI-GeneID:
134332213
NCBI-ProteinID:
XP_062869833
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All DBs
Position
18:21920453..21952377
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AA seq
708 aa
AA seq
DB search
MENKRGEIPTSVLDNLCSRFILHVPSEERDNAIRVCFQIELAHWFYLDFYVQNTPGLPQC
GIRDFAKAVFNHCPFLLPQGEDVQKVLDKWKEYKMGVPTYGAIILDETLDNVLLVQGYLA
KSGWGFPKGKVNEEEAPHDCAVREVLEETGFDIRNRICKDTFIEQKITEQIARLYIIPGV
PKETKFNPKTRKEIRNIEWFSVDKLPCHRNDMTPKSKLGLAPNKFFMVIPFMRQLKEWIS
KHKLESTSSDEDFMSNGSTPCKSFHSRPRRSHVSVDSSLEDGLAKPNQLKAIGQPSPCEF
GDFLTVKNHNVKCNGKKHQDLSNVKKRTNDFNNHQKEEKKLQPRRLQDNFDADAQEEVHS
VNGRSDSCNGSSHGHHWGYNDQSSWSSAFQDCSGKSQSPIDIETSKSVYDPSLPAIILDG
YDLTGHPGLTLLNNGHTLQLSLPNTMRIVKGFDQIYLAAQLHFHWGAVDTPGSEHTVDNV
HFPAEIHVVHYNSKYPNISVAASKPDGLAVLGGLIGIGLHENENYGNILSVLKNISVQET
NAQIPGFNIRHLLPNSLQNFYRYTGSLTTPPCFQSVNWTLFNDTISVSRRQLAALEDSLT
AGQNQLLSKNFRVPQPLNERRVLASFTRLPTVQGPNAGVPFSKETITRVKTSGSNDGLSK
GDILAILFGVFFALTLLAFIMYAYQQRKRTKDSRQNVVYKPTSRKEDI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaacgaggagagattccgaccagcgtcctggataatctctgcagtcgcttc
atcctgcacgtcccaagtgaagaaagagacaatgctatccgagtttgcttccagattgag
cttgcccattggttttacctggacttttacgtgcagaacacaccaggattacctcagtgt
gggataagagactttgccaaggctgtttttaatcactgtcccttcctgcttccccaaggc
gaggatgttcagaaggttttagataagtggaaagagtataagatgggggttcctacatat
ggtgcaattatcctagatgaaacccttgacaatgttttactagtgcaaggatatctagct
aaatcaggatggggctttcctaaaggaaaagttaatgaggaggaagcgccacatgattgt
gctgtacgagaggttttggaagagactggctttgatatccgaaaccgcatctgcaaagac
acttttattgagcagaaaatcacagaacagattgcaagattgtacataatacctggtgtt
ccaaaagagacgaagttcaaccccaaaaccaggaaagaaataaggaacattgaatggttt
tcggttgacaaactaccctgccatagaaatgacatgactcctaaatccaagcttggcctt
gctcccaacaagttcttcatggttataccttttatgagacagctcaaagaatggatatcc
aagcataaattggaatcaactagcagtgatgaagactttatgtctaatggtagcactcca
tgcaagtcttttcactctcggccgaggcgctcacatgtgtcagtggactcatctctggaa
gatggcttggcaaagcccaatcaactaaaagctattggacaacccagtccatgtgagttt
ggagactttcttacagtcaagaatcataatgtgaaatgcaatggaaagaagcaccaagat
ttgtctaatgtgaagaaaaggacaaatgacttcaataatcatcagaaagaggagaagaag
cttcagcccagacgactgcaggacaattttgatgctgatgctcaggaagaagtgcacagt
gtaaatggacgatcagattcttgcaatggatcttcacatggacatcactggggctataat
gatcagagctcgtggtcgagtgctttccaagactgcagtggaaaatctcagtctcccatt
gacattgagactagcaagtcagtatatgatcccagtctgcctgctataatactggacggg
tatgatctaacaggtcaccctggtctgacactgcttaacaacggtcacacattgcagctt
tctttgcccaacactatgcgcatagtgaaaggatttgatcagatctatctggctgcccag
cttcattttcactggggcgctgttgatactcctggctcagagcacaccgtcgataatgtt
cacttccctgctgagatccatgtggttcattataactccaaataccccaatatctcagtg
gctgcaagcaaaccagatggactcgctgtgttgggaggactcattgggattggtcttcac
gagaatgaaaactatggaaacattctgtctgtacttaaaaacattagtgtacaagagaca
aacgctcagatcccaggttttaatatccgtcacctgctgccaaacagcttgcaaaatttt
tataggtacactggttccctgacaactccaccatgtttccagtcagtaaactggacactg
tttaatgacacaatcagtgtctcgaggagacagctggctgctctggaggactcgttgaca
gcagggcaaaatcagctcctgtccaaaaactttcgagttccacagcctcttaatgaaaga
cgagtgctggcctcttttactaggttacccactgttcagggtcctaatgcaggtgtgcca
ttttcaaaagaaactattacaagggttaaaacaagtggatcaaatgatggactgtccaaa
ggtgatattttggccattctctttggagtcttttttgcactaactttgctggctttcatc
atgtatgcttatcaacagcggaaaagaactaaagactccaggcaaaacgtggtttataaa
ccaacatccaggaaggaggacatataa
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