Trichomycterus rosablanca: 134332269
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Entry
134332269 CDS
T09921
Symbol
clip1b
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
134332269 (clip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134332269 (clip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134332269 (clip1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
134332269 (clip1b)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
134332269 (clip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
134332269
NCBI-ProteinID:
XP_062869901
LinkDB
All DBs
Position
18:complement(21344340..21371443)
Genome browser
AA seq
965 aa
AA seq
DB search
MSEHANMSTGKPSGLKPPTKIGKPSALPTKTPSSSATPKAVPSPGAGTSVGNDSVTDFTV
GERVWVNGNKPGYVQFIGVTQFAPGQWAGIVLDEPIGKNDGSVTGVRYFQCEDLRGIFTR
PSKLSRAPTAEPEANGAQTSTSQASSAVKSTPAATDEQAATAAATKTKTNLAKTASSSIS
NLSEADSAMKAKRELKLGDRVLISGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAV
AGSRYFQCMPKYGLFAPTHKVTRIGFPSTTKAKSSRHRSTSQQSPSASSVSSMSSVTSSV
GRPSRAGLLTETSSRYARKISGTTALLEALKEKQQHIEQLLAERDIERTEVAKATCHAGE
VQQELALLRKGQEQYVLEMEAKLDQLRRLVETADREKVELLNQLEEEKRKVEDLQFSVEE
ACITKGDLETQTKLEHAHIKELEQSLLFEKTKADKLQRELEDTRLATVSERSRIMELEKE
VSELQLRLRSQRAEAGLGSPPLQDKKVRELSSEIEARQKEVLLLQQRLSSSEQENSSLQH
QLEEVKQKLDTEMEENKRTAASMQEMQCSMQSDREKLEQLHSKNQKLEQEMASRQQQEEQ
RNKEQKLQERELQEKLGQAEKELSRKQERNLELEQKVTELTLLTDKAQSIESAEALQSFK
QKNQELHQELEALKKQNSNYQEELSLSKKQLSSESQHIGSLCKEIEELKLAASQKSLKLV
ALQEENGKLSQELDSSRLEGHKQRAFEGENLHHSNQSEIKESENFNMLISEKDKELEALR
KEIAVLRGENAMAKTLQAAVESLEQDKVQLQSKVQILELKLEGRLNNDQVENSSGDTAMN
ELKKEKEFAEGQVNFLNSVIVDLQRKNEELRVKLKKMALAEFNGNDGNDGLDEGKKKKKA
PPRVFCYICDCFDLHDTEDCPTQMQSPDSPPHSTHRGSRVKERPYCDICEAFGHWTDSCN
DDQTF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcatgcaaacatgagtacaggaaagccaagtggtctcaagccacctactaag
attggtaagcctagtgctctaccaaccaagacaccctcttcctcagctacaccaaaagct
gtaccgtccccaggtgctggcacctcggttggtaatgactcagtgacagatttcactgtg
ggcgagcgcgtgtgggtgaacggaaacaaacctggatatgttcagttcattggtgtgacc
cagtttgcaccaggccagtgggccggcatagttctggatgagcctattggaaaaaatgat
ggctctgtgactggagtgcgctatttccagtgtgaggacttgcgaggcatttttacccgt
ccctccaaactatctcgtgctcccactgcagaacctgaggccaatggggcacagacctcc
accagccaagcatcatctgctgtcaaatctactcctgctgctactgatgaacaagctgct
actgctgctgctaccaagacaaaaacaaatctagctaaaacagccagcagttctatctcc
aacctttctgaggcagattcggctatgaaggcgaaacgggagctgaaacttggtgatcgt
gtgttgattagtggaacaaaagcaggtgttgtgcggtttttgggggagactgactttgct
aagggggaatggtgcggagtggagcttgatgagccgcttggcaagaatgatggagcagtg
gctggctcaaggtatttccagtgtatgccaaagtatggcctgtttgctcctacacacaaa
gtgacccgcatcggctttccctcaaccaccaaagccaaaagctcgaggcacaggtccaca
tcgcagcaaagccccagtgcctcttcagtcagctccatgagctccgttacctcttctgta
ggaagacccagtcgtgcaggcctgctgaccgagacctcatcccgctatgcacgaaaaatc
tcagggaccacagccctgctggaagctctaaaggagaagcagcagcacattgagcagctc
ctggccgagcgggatatagagagaactgaggtggccaaggctacatgccatgcaggagag
gtgcagcaggagttggctttgctcaggaaaggccaagagcagtatgttctcgagatggag
gctaagctggaccagttacgccggcttgtggagactgcagacagagagaaagtggagttg
ttaaatcagcttgaagaggaaaaaaggaaagtagaagatcttcagttcagtgtagaagag
gcttgcattaccaaaggtgatctggagacgcagaccaaactggaacatgcccacattaag
gagctcgaacagagccttctctttgaaaagaccaaagctgataaactccagagggagtta
gaggatactaggctggccacagtgtctgagaggtcccgaatcatggagctggaaaaggaa
gtgtcggagctgcagctacgcctgcgatctcagcgagcagaagcggggttaggttctccc
ccattacaagacaaaaaggttagggaactcagcagtgagatagaggccagacaaaaggag
gtgctgctccttcagcaaagactcagctcctctgagcaggagaactcatcacttcaacat
cagctggaggaagtgaagcaaaaactcgatactgaaatggaagaaaataaaaggacagca
gcgtccatgcaagagatgcagtgtagtatgcagtcagacagagaaaaactggagcagctg
cacagtaagaaccagaagctggagcaggagatggcctccaggcagcaacaggaggagcaa
cgcaataaggagcagaagcttcaggagagagaactgcaggaaaaacttggacaagcagag
aaggaactaagcaggaagcaggaaagaaaccttgaacttgagcagaaggtgacagagctt
acgctgctcacagacaaggcacagagtattgagtcagcagaagccctacaatcattcaaa
caaaaaaatcaagagctgcatcaagagcttgaagccctgaagaagcagaactccaactat
caagaagagcttagtttgtccaagaagcagctcagctctgagagccagcacatcggaagc
ctgtgcaaagaaattgaggagctgaagctggcagccagtcagaagtcacttaagctggtg
gcgctccaggaagagaatgggaagctgtctcaggagctggacagcagccggctggaaggc
cataagcaacgggcatttgagggcgagaatctgcatcacagcaaccagtcagagatcaaa
gagagtgaaaacttcaatatgttaatatctgagaaggacaaagaattggaagcattaaga
aaggagattgcggtgttgcgtggagagaatgccatggctaaaaccctgcaggcagcggtg
gaatctctggagcaggacaaggtgcagctacagagcaaagtgcaaatccttgaactgaag
ctggagggcagactgaacaatgatcaggtggaaaattcctcaggtgatacagccatgaac
gagctcaaaaaagagaaagagtttgcagagggacaggtcaatttcctcaactcggtcatt
gtggaccttcagaggaaaaatgaagagctaagggtgaagctaaagaaaatggctttagct
gagtttaatggaaacgatgggaatgatggtttggatgagggcaagaagaaaaagaaagct
ccaccacgggttttctgttacatttgtgactgttttgacctgcacgacacggaagactgt
cccacccaaatgcaatctccagactcaccaccccacagcacccaccgtggcagccgcgtg
aaagaacggccctactgcgacatctgcgaggccttcggccactggacagactcctgcaac
gatgaccaaacgttttaa
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