Trichomycterus rosablanca: 134332308
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Entry
134332308 CDS
T09921
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
trn
Trichomycterus rosablanca
Pathway
trn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134332308 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134332308 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134332308 (vps36)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
134332308 (vps36)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134332308 (vps36)
Exosomal proteins of colorectal cancer cells
134332308 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
Flu_M1_C
TssO
GRAM
BBL5
MA3
Motif
Other DBs
NCBI-GeneID:
134332308
NCBI-ProteinID:
XP_062869964
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All DBs
Position
18:complement(23868202..23876948)
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AA seq
382 aa
AA seq
DB search
MDRFMWTNGLLEMNETLVIQQRGVRLYDGDEKAKMDAGVVLLTTHRLLWRDQKNHECCIC
IPLSQIVFFEEQTGGIGKSAKIVIHLHPVSPNKEPGPYQNSKFSHIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVPHLINTIAGSKAGKTRAVGIVGIERKLEEKRKEMDKNISEAFED
LSKLMEKAKEMVELSRSIASKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPDDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccgatttatgtggaccaacggactcctggagatgaatgaaactctagtgatccag
cagaggggggtcagactgtatgacggagacgaaaaggcaaaaatggatgcaggggttgtc
cttttaaccacgcatcgtttactttggagggatcaaaagaatcatgaatgctgcatatgt
atacccttgtctcagatcgtattctttgaggagcagacaggaggcattggaaagagtgcc
aagattgttattcacctgcatccagtctctcctaataaagaaccagggccctaccagaac
agcaagttctcccacattaaattgtcctttaaagaacatggacaaatagagttttacaga
cgtctgacagaggagatgactcagaagcggtgggagaacacaccagtaccacatctcata
aacacaatagcaggatcaaaggcaggaaaaacacgcgcagtcggaattgttggcattgaa
cggaagctggaggagaaaagaaaagagatggacaaaaacatttcagaggcctttgaagat
ctcagcaagcttatggaaaaggctaaagagatggttgagctttccagatccatcgctagc
aaaatcaaagacaaacagggagacatcacagaggacgagactatccgcttcaagtcctat
ttgctgagcatgggcattgccaaccctgtaaccagggaaacgcatggctcgggcacacat
tatcacatgcagcttgctaaacagctgggagacatgctgcaggcaccattagaggagcga
ggagggatgatggctcttaccgaggtttactgtctagtaaacagagcacgagggatggag
cttctctctccagatgatctggtcaatgcctgcaagatgtttgagtctctaaaactcccg
ctcaggctgcgtgtgttcgacagtggggtgatggtggttcagcttcaatctcacagtgaa
gaagaaatgattgcatctgctctagataacgtgtctgacaagggctctttaacagcagag
gagtttgcaaaacttttgggattgtctgttctccttgcaaaagaaagactgctgctggct
gagaagatgggacacctatgccgagacgactctgtggaagggctgcgcttttaccctaac
ctgttctga
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