Trichomycterus rosablanca: 134332320
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Entry
134332320 CDS
T09921
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn03030
DNA replication
trn03410
Base excision repair
trn03420
Nucleotide excision repair
trn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134332320 (rfc3)
03410 Base excision repair
134332320 (rfc3)
03420 Nucleotide excision repair
134332320 (rfc3)
03430 Mismatch repair
134332320 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134332320 (rfc3)
03036 Chromosome and associated proteins [BR:
trn03036
]
134332320 (rfc3)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134332320 (rfc3)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
134332320 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
134332320 (rfc3)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
134332320 (rfc3)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
134332320 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
134332320 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA
AAA_22
AAA_16
nSTAND6
AAA_11
Sigma54_activ_2
ABC_tran
AAA_2
Motif
Other DBs
NCBI-GeneID:
134332320
NCBI-ProteinID:
XP_062869982
LinkDB
All DBs
Position
18:complement(27947754..27955912)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GSGVEKLRIEHQSITAPSKKKIEINTIASNYHLEVNPSDAGTSDRVVIQELIKTMAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMTTCRLILCCNSTSKVISPIRSRCL
AVRVPLPSSEEVCSVLMGVCKKEGLLLPAELAKRIAEKSGRNLRKALLMCEACRVQQYPF
SPDQEIPQTDWEVFLRETANAIVNEQSPQRLLEVRARLYELLTHCIPAEIIMKGLVSELL
SNCDGHLKPEVAQLAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggtggataaatacagaccaacatctctggcgaagctggattatcataaa
gaacaagcaaaccagctgagaaatttggtacaatgtggcgacttccctcaccttcttgtt
tacggaccgtccggcgctggaaagaagacccggatcatgtgtctgctccgggagttgtac
ggttcaggggtggagaagctccgcatcgaacaccagtccatcactgcaccttcgaaaaag
aaaatcgaaatcaacacgatcgccagtaactatcatttggaggtcaatccgagtgacgcg
gggaccagcgaccgcgtcgttatccaggagctgatcaagacgatggcgcagtcccagcag
attcagtccagcacacagagagagttcaaggtggtgctgctgaccgaagtggaccggctg
accaaggacgcgcagcacgccctacgccgaaccatggagaagtacatgactacctgtcgt
ctcatcctgtgctgtaactccacctccaaggtcatctcgcccatcaggagcaggtgcctg
gctgtcagggtgccgctgcccagctcggaggaggtgtgcagcgttctgatgggcgtgtgc
aaaaaggaaggtctgctgctcccggctgagctggccaaacggatcgcagagaagtcggga
cgcaacctgcgcaaagctctgctgatgtgcgaggcctgtcgagtccaacagtacccgttc
tctccagatcaggaaatcccccaaacggactgggaggtgttcctcagagagacggccaac
gccatcgtgaacgagcagagcccacaaagactcctggaggtccgagcgagactctacgag
ctcctgacccactgcattccagcagaaatcatcatgaagggcctggtgtccgagctgctg
agtaactgcgacggtcacctgaaacccgaggtggctcagctggccgcttactacgagcac
cgactgcagctgggcaacaaggcgatttaccacctggaggccttcgtggccaagttcatg
gccatctataagaagtttatggaggacggactggataacttcatgttctga
DBGET
integrated database retrieval system