Trichomycterus rosablanca: 134332355
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Entry
134332355 CDS
T09921
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134332355 (nsun5)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
134332355 (nsun5)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Other ribosome biogenesis factors
134332355 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
RsmF-B_ferredox
FtsJ
Motif
Other DBs
NCBI-GeneID:
134332355
NCBI-ProteinID:
XP_062870041
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All DBs
Position
18:complement(28196147..28203829)
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AA seq
468 aa
AA seq
DB search
MALYIKAAEILEKVERKKGAVKTLVYDSKYQNIKQLFALVCETQKYSEVLQEIIDTTRLL
KDTKLRIHLAKALVYDLLIGQGVKCGGAWKAVMLKHRSRLQAALARIKVRQKVSRNEDLL
PPSMQNIGGVTIPRYVRVNTLKTTVEDVIDYLKREGYSYHGTASRLEDLYRLSGKEFLKD
LHLRDLLVFSAKMDFHDHYLYKAGHIILQDKASCLPAHLLDPPVGAHVIDACAAPGNKSS
HLAAIMKNKGKLFAFDLDAKRLSTMSTLLLRAGVTFQQLANEDFLKVDPLCPAYKDVTHI
LLDPSCSGSGMLCLSDGGSEEQRRDPERLQALAAFQLRCLNHALRFPRLQRLVYSTCSVH
REENEEVVSACLQNNPAFGLVRLLPEWPERGLEPLAQCLRASVTKTLTHGFFVAMLKRRL
QTPGSSMELSSRVTPPAQEERAETSVEDQPPPAKKKKRNRKKPKKQGT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtatataaaagcagcagagattctggagaaagtggagcgaaagaaaggagct
gttaaaactctggtgtacgacagtaaatatcagaatataaagcagctgtttgctctggtg
tgtgagactcagaaatacagtgaagtgcttcaggagataatagacacaaccagactactg
aaggacaccaaactcaggattcatttagcaaaggctttggtttacgacctgctgatcggt
cagggtgtaaaatgtggaggagcctggaaagctgtgatgttgaagcatcgctccagactc
caggctgctttggctcggataaaggtcagacagaaagtgagccggaacgaggacctgctt
cctcccagcatgcagaatatcggcggtgtgactattccgaggtatgtgcgcgttaacacg
ttaaaaacgacggtggaggacgtcatcgactacctaaaaagagaaggatattcgtatcat
ggaacggcaagcaggcttgaggatttgtaccgtctgtctggtaaagagttcctgaaagat
ctgcacctcagagatcttctggtcttcagtgcaaaaatggatttccacgatcattacctg
tataaggcggggcacatcatcctgcaggacaaggccagctgcctccccgctcacctcctc
gacccgccggtcggagctcacgtgatcgacgcctgtgcagctcctgggaataaaagcagc
cacctcgctgccatcatgaaaaataaaggaaaactcttcgcctttgacctggatgcgaag
cgtctgtccaccatgagcacgctgctgctccgcgccggggtcacatttcagcagctggcc
aatgaggattttctcaaagtggatccgctttgcccggcgtacaaggacgtgacgcacatc
ctgctggacccgtcgtgcagcggatcagggatgctgtgcctgtcggacggcggctccgag
gagcagcggcgggaccccgagcgtctgcaggcgctggctgcgtttcagctgcgctgtctg
aaccacgccctgcggttcccgcggctgcagcggctcgtctactccacctgctccgtccac
cgggaggagaacgaggaggtcgtgtcggcgtgtctacagaataatccagcgttcggactg
gtccgtctccttcccgagtggcctgaacggggtctggagccactggcgcagtgtttgcgt
gccagcgtcacgaagacgttaactcacgggttcttcgtagccatgctgaagcggcggcta
caaacaccaggttcttccatggagctgagctctagggtgacgcctcctgctcaggaggag
cgagcggagacctctgtggaggaccaaccgcccccagcaaagaagaaaaagaggaacaga
aagaaacccaaaaagcaaggaacctaa
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