Trichomycterus rosablanca: 134332420 Help Entry 134332420         CDS       T09921                                  Symbol col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism trn  Trichomycterus rosablanca Pathway trn04510   Focal adhesion trn04512   ECM-receptor interaction trn04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:trn00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     134332420 (col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     134332420 (col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     134332420 (col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:trn00536]     134332420 (col1a2) Glycosaminoglycan binding proteins [BR:trn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    134332420 (col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  134332420 NCBI-ProteinID:  XP_062870135 LinkDB All DBs Position 2:complement(29253163..29275753) Genome browser AA seq 1352 aa AA seqDB search MLSFVDTRILLLLAVTSYLASCQQGPRGDKGPRGDRGPKGPDGKPGKHGLPGPPGPPGPP GLSGNFAAQYDGSKGPDPGPGPMGMMGARGPSGPPGPPGPQGLQGHAGEPGEPGQSGGVG SRGPPGPSGKNGEDGNNGRPGKPGDRGTVGPQGARGFPGTPGLPGMKGHRGYNGLDGRKG EPGGMGTKGENGAPGANGTPGQRGGRGLPGERGRAGPGGPAGARGSDGNTGPAGSAGPLG SAGPPGFPGAPGPKGEIGPAGSTGPSGPQGQRGEPGSNGVAGPVGPTGNPGANGINGAKG ATGAAGAAGAPGFPGPRGGPGPQGSSGPAGPRGLSGDPGPVGVKGDAGPKGEPGSSGPQG PTGASGDEGKRGPNGEQGPSGPAGMRGPRGAAGSRGLPGAAGRGGPMGMPGTRGASGPAG ARGGPGDPGRAGEPGLVGARGLPGSPGNAGPQGKEGPAGPPGQDGRSGPPGPTGPRGQPG NIGFPGPKGPSGESGKPGDRGPAGPNGLRGPPGPDGNNGPAGPPGVTGGFGEKGEQGPAG SPGFQGIPGPPGSAGEVGKPGDRGIPGDQGVSGPAGAKGERGTSGPAGAVGAQGPIGSRG PSGPPGPDGNKGEPGAAGLSGAPGHQGPAGMPGERGAAGTPGPKGEKGESGYRGLEGNAG RDGARGAPGPSGPPGPAGANGDKGEGGPAGPSGPSGARGVPGERGEAGPAGPSGFAGPPG ADGQTGARGERGPAGGKGDGGPPGPAGPAGNSGPLGPAGPAGPPGARGDSGPSGLTGFPG AAGRVGAPGPAGITGPPGASGAAGKDGPRGTRGESGPAGPPGENGMVGPHGLAGDKGTPG ETGGPGPQGISGPSGLSGPQGITGLPGSRGERGTPGSVGGVGEPGRVGPAGSPGPRGSAG NIGLPGMTGPQGEAGREGSPGNDGAPGRPGSPGVKGDRGEPGSPGPSGMSGAPGPMGPAG SAGRHGNRGESGPSGSVGPAGPAGARGAPGPAGPRGEKGVAGEKGERGMKGLRGHPGLQG MPGPNGPSGDSGPAGPAGSFGSRGPSGPNGPSGKDGRPGTNGPIGPAGHRGAPGSVGPSG PPGIPGPAGPPGAAGGGYDVSGGYDEYRADQAALRAKDYEVDATIKSLNTQIENLLSPEG SKKNPARTCRDIRLSHPDWSSGFYWIDPNQGCTMDAIKVFCDFTTGHTCIHAHPESIARK NWHRSTQEKKHVWFGETINGGTEFGYNDETLSTQSMATQLAFMRLLANKAVQNITYHCKN SIAYMDGENRNLKKAVLLQGSNDVELRAEGNSRFTYSVLEDGCTKHTGQWSKTVIEYRTN KPSRLPILDIAPLDIGGADQEFGLDIGPVCFK NT seq 4059 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacccggattctgttgctgcttgcagtgacttcgtacctagca tcatgccaacagggcccaagaggagataagggaccaagaggcgacagaggtccaaaagga ccagatggcaaacccggcaaacatggacttcctgggcctcccggccctcctggcccccct ggtcttagtggaaactttgctgctcagtatgatggctctaaaggacctgatcccggccct ggacctatgggcatgatgggagcccgaggaccttctggaccacctggtccacctggaccc caaggtctccaaggacatgctggtgagcctggcgagcctggacagtctggcggagttgga tcccgtggaccccctgggccttctggcaagaatggtgaagatggtaacaatggcagacct ggaaagcctggagacagaggaactgttggaccccagggtgctcgtggtttcccaggaact cctggacttccaggcatgaagggacacagaggctacaatggtcttgatggacgcaaagga gagcctggtggtatgggcactaagggtgagaatggagctcctggagctaatggaacccct ggacagagaggtggtcgtggtcttcctggtgagagaggccgagctggtcctggtggtccg gctggtgcccgtggttctgatggtaacactggtcctgctggctctgctggtcctctgggc tctgctggccctccaggtttcccaggcgcacctggtcctaaaggagagattggacctgct ggttccactggaccatctggacctcagggacaaagaggagagcctggttcaaatggtgtt gctggcccagttggtccaactggtaaccctggtgccaatggtattaacggtgctaaagga gctactggtgctgctggagctgctggtgctcctggattccctggcccaagaggaggccct ggcccacaaggatcttctggacctgccggtccaagaggcctttctggtgaccctggaccc gttggagtgaagggtgatgctggtcccaagggtgagcctggtagctctggtccacaggga cctactggtgcttctggtgatgagggcaagagaggacctaatggtgagcagggaccatct ggccctgctggcatgcgtggacccagaggagctgctggaagccgtggtcttcccggtgca gctggtagaggtggcccaatgggtatgcctggaacaagaggtgcttctggccctgctggc gcacgtggaggccctggtgatcctggccgtgctggtgagcctggcctggttggagccaga ggtcttcctggcagccctggcaatgctggaccccaaggaaaggagggacctgctggtcct cctggtcaagatggtcgttctggcccacctggccccactggacctagaggccagcccggt aatattggattccctggccctaaaggaccctctggtgagtctggcaaacctggagacaga ggacctgccggacctaatggtctaagaggtcctcctggtcctgatggcaacaatggccct gctggtccccctggagttactggtggatttggtgagaaaggagagcaaggacctgctggt tctccaggtttccagggtattcctggacctcctggctcagctggtgaggttggcaaacct ggagacagaggtattcctggagatcaaggtgtatctgggcctgctggtgctaagggagag cgtggtacctctggtcctgctggtgctgtgggtgcccagggaccaattggttctcgtggt ccttctggtcctcctggccctgatggaaacaagggtgagcctggtgctgctggcctttct ggtgccccaggacaccagggacctgctggtatgcctggtgagcgtggtgcagctggtact cctggacctaagggtgagaagggtgagtctggttacagaggcctagagggcaatgctgga agagatggtgctcgtggtgctcctggacccagtggacctcctggacctgctggtgctaat ggagataagggtgagggtggccctgctggtccttctggcccttctggtgctcgtggtgtt cctggagagcgtggtgaagctggccctgctggaccttctggatttgctggcccccctggt gctgatggccagactggtgctagaggcgaaagaggccctgctggtggaaagggtgatggt ggtcctcctggccccgctggtcccgctggaaactctggacctcttggtcctgctggtcct gctggcccccctggtgctcgtggtgacagcggaccttctggtttgactggtttccctggt gctgctggcagggttggtgcacctggtcctgctggaattactggtcctcctggtgccagt ggagctgctggaaaggatggtcctcgtggtactcgtggtgagtctggacccgctggtcct ccaggagagaacggcatggttggacctcatggtctggctggtgataagggaacccctgga gagactggtggcccgggaccacaaggtatttctggaccaagtggtctgagtggacctcag ggtatcactggtcttcctggttccagaggtgaacgtggtactcctggtagtgttggtggt gttggtgagcctggtagagttggccctgctggttcccctggtcctcgtggttccgctgga aacattggattgcctggtatgactggtcctcagggagaagctggacgtgagggtagccct ggtaatgatggtgctcctggacgccctggatctccaggtgttaagggtgaccgtggagag cctggatctcctggtccctctggaatgtctggtgcccctggacctatgggacctgctgga tctgctggcagacatggaaaccgtggtgaatctggaccttctggatccgttggaccagct ggccctgccggtgcaagaggtgcccctggccctgctggacccagaggtgagaagggtgtg gctggagaaaagggagaaagaggcatgaagggactgcgtggacatcctggtcttcaggga atgcctggacccaatggtccttctggtgacagtggtccagctggtcccgccggttctttt ggttcaagaggtccatctggtcccaatggcccatctggcaaggatggtagacctggcact aatggtcctattggacctgctggacacagaggtgcacctggatcagttggaccatctgga cctcccggaattcctggacctgccggaccccctggtgctgccggcggtggatatgatgtg tctggtggttatgatgaatacagagctgaccaagctgctctcagggctaaggactatgag gtggatgccaccatcaagtccctgaacactcagatcgagaacctgctctcacctgagggc tccaagaagaaccctgcccgcacctgccgtgacatcagactcagccacccagactggagc agtggtttctactggatcgatccaaaccagggctgcaccatggatgccattaaggtcttc tgtgactttaccactggtcacacctgcatccacgctcatccagaaagcattgcacgcaag aactggcacagaagcacccaggagaagaagcatgtctggttcggtgagaccatcaacggt ggcactgagtttggctacaatgatgagacactgagcacacagtccatggctacacagctt gccttcatgcgtctgctggccaacaaggctgtccagaacatcacttaccactgcaagaac agcattgcctacatggatggtgagaaccgcaacctgaagaaggctgtcctgctccagggc tccaacgatgttgagctcagggcagagggcaacagtcgcttcacctacagcgtcctggag gatggctgcactaaacacaccggtcaatggagcaagacagtcatcgaatacagaacaaat aaaccatctcgtctgcccatccttgacattgcacctttggacattggtggcgctgaccag gagtttggtttggacattggcccagtctgtttcaaataa

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