Trichomycterus rosablanca: 134332481
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Entry
134332481 CDS
T09921
Symbol
smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134332481 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
134332481 (smyd4)
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GFIT
Motif
Pfam:
TPR_12
TPR_2
SET
zf-MYND
TPR_BSK1_C
YfdX
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
134332481
NCBI-ProteinID:
XP_062870212
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Position
18:complement(21822143..21829597)
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AA seq
745 aa
AA seq
DB search
MDLPCQKWIKHVKQRWTELGSAGGESFTLLTDIDELFHTAQSQVQEEDLKVLASISEKYQ
VKKSSEDAAKCREQGNISFKIKDYISAALYYTRGVCYAIKNSEQISLCYANRSAALFHLG
FYDECLVDIQRALDEGYPSQLQRKLLDRRSQCLNQLEKQKHLKTLSAKCETQETKKSKDG
NSCLSSTVCVHFSPENGRHLLVAGSKSAGEVIFQDEAFSLVLIPDNGQSDEVNAFGTELR
HCHHCLCETLSSVPCQGCSYAQYCGQKCEKEAWRQYHCWECPIGSELKSLGLFAHLSLRV
TLKAGIKDVQRARERCSNSANYVPEVHCARSDVCNSKTDSIPDKCSESFAHSGCFNEKSY
LDIYNLLPYVNKHSPSLRFLLAFTMAALCQRLELARPATCELQKGSCCWGHERKILGPTA
LRHMMQLRCNAQAVTTIKVKESSSPSLAVQSSKEIRIATAVFPILSLLNHSCCPNTSISF
SLGFSSMGKSGPVSFASGVTVSIRASQDIAAGQELLHCYGPHCKRMDVKERQRQLMEQYF
FQCHCQACKQQLGDETRALPLILSGLKCEKCGSSLQSRVDVHVCSQSSCHHHISNAELED
KIQILKHHMTSALQLMKNHKYDQAIRVLQDASTKASSILMKTHPLQGEIADATARAYASL
GNWRQAASHLKQSVIAVGCQYGEDSLELGRQLFKLAQLHFNGGDIQSACSVIPKAQRLLS
LHLDPCCEELQELQAMEACLNSTST
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggatctgccctgtcagaagtggattaaacatgtgaagcagaggtggaccgaactggga
tcagcaggaggagagagcttcactctgctgactgatatcgatgagctgttccacactgca
cagtcgcaagtgcaagaagaggatcttaaagttttggccagtatttcggagaagtaccag
gtaaagaaatcctctgaagatgcagccaaatgcagggagcaaggcaatatcagcttcaaa
ataaaggactacatttctgctgcactgtattacaccaggggtgtgtgttatgccataaag
aattcagaacagatatctttatgctatgccaatcgttcagctgccctgttccaccttggt
ttctatgatgaatgcctggtggacatccagcgggctttggatgaaggttatccaagccaa
ctccagcgcaaactgttagacaggcggtcacagtgcttaaatcaacttgaaaagcaaaag
cacttaaaaacactatctgctaagtgtgaaacacaagagactaaaaagtcaaaggatggc
aatagctgtctctcatctacagtgtgtgttcacttttctcctgaaaatggtagacaccta
ttggtcgctgggagcaagtcagcaggagaggtcatttttcaggatgaggcctttagcttg
gttctcatacctgacaatggacagagtgacgaagtcaatgcattcggaacagaacttaga
cactgccatcactgtctgtgtgagactttaagctctgtgccatgtcagggctgtagctat
gcccaatactgtggacagaagtgtgaaaaggaggcatggaggcagtatcactgttgggag
tgcccaattggctctgagctgaagtctctgggcttgtttgcacacttatccttgcgagtt
accctaaaagctggaattaaagacgtccagagggcaagagaaaggtgttctaactcagct
aattatgtaccagaggtacattgtgccagaagtgatgtgtgcaatagcaaaactgactcc
atacctgacaaatgttctgagtcttttgctcattcaggttgttttaatgaaaaatcatat
ttggatatttataacctgttaccatatgtgaataaacattctcccagcttgcggttcctg
ttagcttttaccatggcagcactgtgtcagagactggaattggcacggccagcaacctgt
gagttgcaaaaagggagttgttgctggggacacgagaggaagattttgggacctacagct
ctaagacatatgatgcagcttcgatgtaatgctcaggctgtgacaacaattaaagtaaaa
gagtccagcagtcccagcctagcagtccagtccagtaaggaaattcgcattgccactgca
gtgttccccattctgagtctgctcaaccactcttgctgccctaacacaagcatctccttt
agtctgggctttagttccatgggaaaaagtggaccagtttcttttgcttcaggtgttaca
gtttctatccgagcgagccaagacattgctgcgggacaggagctgttgcactgctatggc
cctcactgtaagaggatggatgttaaagagcgccagcgccagctgatggagcagtacttt
tttcagtgccactgccaggcttgtaagcagcagcttggtgatgaaactagagcactaccc
ttaatcttgagtgggctcaagtgtgaaaaatgtggaagctcccttcagagcagagttgat
gtgcatgtatgttcacaatcatcctgtcatcatcacatctcgaatgcagaactggaggat
aaaattcagatcttaaagcatcacatgaccagtgctttacagctcatgaagaaccataaa
tatgatcaggctataagggtgttacaggatgcgtccactaaggcaagcagcattttaatg
aaaactcaccctctgcagggggaaatagctgatgcaacagcacgtgcctatgccagcttg
ggaaactggaggcaggctgcctcacatttaaagcaaagtgttattgctgtaggttgccag
tatggagaggacagtttggagctgggtaggcagctctttaaattggctcagctacacttc
aatggtggagatatacagtctgcttgctcagtaattcctaaagcccagcgcctcctcagc
cttcaccttgacccttgctgtgaggaactgcaggagcttcaggctatggaggcctgctta
aacagtacatcgacataa
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