Trichomycterus rosablanca: 134332499
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Entry
134332499 CDS
T09921
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134332499
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
134332499
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
Mucin
EGF_3
hEGF
EGF
Motif
Other DBs
NCBI-GeneID:
134332499
NCBI-ProteinID:
XP_062870237
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Position
18:complement(6191555..6218229)
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AA seq
841 aa
AA seq
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MVLCVLRIILLVICLQMTGSAHGSRTECEQSQFQCENGRCIPSVWQCDGDDDCVDGSDEN
TCVRKTCAELDFVCRNGQCIPKRWHCDGEPDCEDGSDEGTEVCHTRTCRMNEFSCGVGST
LCVPVSWRCDGENDCDNGEDEASCGNITCSPVEFTCASGRCISHNFVCNGEDDCGDGTDE
IDCSLSSCGPNQFQCGNSTCIPIGWVCDDDVDCQDQSDESPQRCGRNSTPLAKCSSSEVQ
CSSGECIHRKWLCDGDADCRDASDERNCPPRSCRPDQFKCGDGSCIHGSRQCNGFQDCTD
GTDELNCHNSTQCRGLDMFKCRSGECIEMNKVCNKFRDCVDWSDEPIKECNLNECVFNNG
GCSHICRDLVIGYECGCTPGLQLIDRRTCGDINECLNPGICSQICVNLKGGYKCECHEGY
QMNSTTGVCKAVGKEPCLLFTNRRDIRKLGLERREYTQIVEQLRNTVALDFHFNQQKIFW
ADMGQKAIFSAVLEDVNSHTKVIDVQMPVGIAVDWIYNNFYWSDLGSKTIAVNNFNGTKQ
KVLFSRDPKEPASIAVDPLSGFLYWSDWGEPAKIERSGMNGLDRQVLVETDIQWPIGITL
DLIKSRLYWVDSKLHTLCSVDLNGDNRRKVLQSKNYLSLPYALTVFEDRVFWTDTDSEAI
YGANKFTGSDVIMLANNLNVPQDIIIYHELIQMSGTNWCNEKVENGGCSYMCLPAPQINK
HSPKYTCVCPEGQELASDSLRCTSAPVDGNMSTSIHEVQSAKGSSAAWAVVPVLLLAMAA
AGAYLMWRNWQIKNKKSMNFDNPVYLKTTEEDLNIDISRHSASVGHTYPAISIVNTEEDL
P
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtgcgtcctgcggatcattctcctggtaatatgtctgcagatgactggatca
gcacatggctcacgaacagaatgtgagcagtcccagttccagtgtgaaaatggccgctgc
atcccctcggtgtggcagtgcgatggggatgacgactgtgtggatggtagtgacgaaaac
acatgtgtacggaagacttgtgcagaactagattttgtttgccgcaacggccaatgcatt
cccaagaggtggcactgtgacggggaaccggactgcgaagatggctcagatgagggcaca
gaagtttgtcataccagaacttgccgtatgaatgagttcagctgtggcgtaggctcaacg
ttgtgcgttcctgtctcatggaggtgtgatggtgaaaatgactgtgacaacggagaggac
gaggcgagctgtggtaacattacctgctctcctgtggagttcacctgtgccagtggtcgc
tgcatctcccacaactttgtatgtaacggtgaggatgactgcggtgatggaactgacgag
atcgactgcagtctttcttcgtgtggtcctaaccagttccagtgtggcaattccacatgc
attcctataggctgggtttgtgatgatgatgtggactgtcaggaccaatcggatgagtca
cctcagcgctgtgggcgaaactcaacgccattggcaaagtgctcatccagtgaagtgcag
tgcagttcgggagagtgtattcaccgcaagtggctgtgtgacggagatgcagactgcagg
gatgccagcgatgaaagaaactgccctcctcgctcctgtcggcctgaccagttcaagtgt
ggcgatggcagctgtatccacggcagccggcagtgcaatggcttccaggactgcactgac
ggcacggatgagctcaactgtcataactcgactcagtgtcgtggtcttgacatgtttaag
tgtcgaagtggagagtgtattgagatgaacaaagtgtgtaataagtttcgggactgcgta
gactggagcgatgaacccataaaggaatgcaatctgaacgagtgcgtgtttaacaatggt
ggctgctcacatatctgccgagacttggtgattggctatgaatgtggttgtacgcctggt
ttgcagctcatcgatcgcagaacatgcggggatataaatgaatgtttaaacccagggatc
tgcagtcagatctgtgtcaacctgaagggaggatataaatgcgagtgtcatgaaggctat
cagatgaactccactacaggagtgtgtaaggcagtaggcaaagaaccatgtctactcttc
acaaaccggcgggacattcggaagctgggactggagcggcgtgaatatacacagatagta
gagcagctgcgcaacactgtggctttggatttccattttaaccaacagaaaatcttctgg
gctgatatgggacagaaagccatcttcagtgcagtgctggaagatgtaaacagccacact
aaagtgattgatgtccagatgccagttggaatagcagtggactggatctacaacaacttc
tactggtcagaccttggtagtaagacgatagctgtgaataattttaatggcaccaagcag
aaagtgctgttcagcagagatccaaaagagccagcatccatcgccgtggatcctctttct
gggtttctttactggtcagactggggtgagccagctaagattgagaggtcgggcatgaac
gggttagacaggcaagtcctggttgaaacagatattcagtggcccatcggaatcaccctt
gatctgatcaaaagcaggctgtactgggtggattccaagctgcatactctgtgtagtgtg
gatctaaatggagacaaccggagaaaagtgctgcagtctaagaattacctgtcccttccc
tacgcccttactgtgtttgaggaccgtgtgttctggacagatactgatagtgaggccatc
tatggggcaaacaagtttaccggctcagatgtgattatgctggccaacaacctgaatgta
ccacaagacataatcatctaccatgaactcatccagatgtcggggactaactggtgtaat
gagaaggtagaaaatggaggctgttcctacatgtgtctgccagctcctcagatcaacaaa
cactcccctaaatatacatgtgtatgtccagaagggcaggagctggcttctgacagcctg
cgctgcacatcagcacctgtagacggaaacatgagcacctctatccatgaggtgcaatca
gccaaaggatcatctgcagcctgggcagtggtaccagtcttgctgctggcgatggctgca
gcaggagcgtatttaatgtggcgtaactggcagataaagaataaaaagagcatgaatttt
gacaacccagtttacctgaagacaacagaagaagatctgaacatcgacatcagcagacat
tctgcctctgttgggcacacatatcctgctatatcaatagtaaacacagaagaggattta
ccataa
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