Trichomycterus rosablanca: 134332569
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Entry
134332569 CDS
T09921
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134332569 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134332569 (pom121)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134332569 (pom121)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
134332569
NCBI-ProteinID:
XP_062870333
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All DBs
Position
18:28182015..28194563
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AA seq
1221 aa
AA seq
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MSPADKRWLAFISFLFISLFFFVLTCIPTYLYILLFFVGSCAVCYYKAEELQLLDWSGLN
PRCGLKALPALRSWLAARTGRVVPAAGRNKNNNRTFKSNARSFVASPADRHFTSFAYRRD
AAFNESAFSPRDILMGSYLGKAESPAGAVRPAGTSGTHRDQLRERLSRPNHGAPTPSRRL
SFGEQFGAAGRVTITPQRHYPLQQTGTSSVGVFPPAQWDGFRKKNVLTQRNTPVHSPVTV
KIARPDNTTRLSFLEQLNSPGALRSPGFEAQADPCSRETVLSVLRASRKRDVDDEDRGHE
AEQKSKRRRNDSGGSSHSAFEPLLANGAPAQLVPKPGSLKRGINASVVEESSSLKRSRTS
SISSVGGSPVACGVPGSVRNPIRSSYSSSLGYPQRKVASSLAMSPLVSPGSSRCQTPDRA
AKKPREENASPAVSSLKCDKETTDTGPGVVERSSTPEVPVTPRSDSGGSSGKRKRKIQLV
SVNRGDQISLPPPPELGYTITVKDLDMEKKAALSQIQKVLKEPEPEKPSSTSAPNPTPAP
CLDIFSKLASSSLPSSAPALSSPSLASLATSSAGPPSTSGAASTAASAPTIDLTVTPSSM
SGPALVPTAMLPTLVTSITTVTAAPKLTNPLLESLKDMKRISALSSPPTTAAATSTAPET
SVAAPPASVTSVSLSIGAVKSEPALSSAPSAFAPVLSKPLSSTPSALAFGGGGVLGPAST
APASSAPAPSAASTLTLGGTAGLKPAESGFKPIFGAGSPALVSTAEVKPTQPTFKPMFDG
AFGQPATSTSASASASLFGGITNAQAASSVPSTTSGTPNPTPSLFGTMNNSHMASLVPSS
TSNTQNSTQSLFGALANTKPVAPSVPSSTSSTPNFTPSLFGGLTNSQPVLSSTTSTQNPT
QSLFGGPKPTQSTPASIPSSNPNSQNTTESLFGAWSAPNSTFQFGASAATTASASSGITT
SATTTSNTNTSFQFGALKPAQSAPSAAPQSAFTFGQNAPATQFTGIGLANNSTPSSTAPT
TQAAFGTSAFSAPKPFGNAQPSTPAKTFGFNAGAGGSAPSFGAPASTAAPTFANSTQPTF
GGPSSGFNFGNTSAPTMNAPSGSAFAFGAAPATPQNSAASGGFNFSASLPGTQFVTPAAQ
QPQAGFSFGAAGTDNNSTFGTSTPAFGGAGGPVMFGSPSTPQGFGAPALATPSASFSIGA
GSKTGSARQRLQARRQHTRKK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgcggataaacggtggctagcttttatctcgttcctttttatcagcttgttc
tttttcgtcctcacttgcatcccgacatacctgtacatactgttattttttgttggatct
tgtgctgtttgttactacaaggccgaagagcttcagcttctggactggtcgggcctgaat
cctcggtgtggcctgaaggctctgccggcactgcggagctggttggcggcgaggaccggc
agagtagtcccggcggccggtcggaataagaacaacaacaggacgttcaaaagcaacgct
cggagttttgtagcttctccggctgatagacattttacttcgtttgcgtaccgaagagac
gcggcgtttaacgagtctgctttcagtccgcgggacatcctgatggggagctacctgggt
aaagcggagagtccggccggcgcggtgcggcccgccggtacctccgggacccaccgcgac
cagctccgggagagactcagccggccgaaccacggagctccaaccccgagcaggaggctg
tccttcggggagcagttcggagctgcagggagggtgaccatcacgcctcagagacattac
ccactgcagcagacaggaacctcatcagtgggcgtttttcctccagcccagtgggacggg
ttccgcaagaagaacgttctcacacagcgcaacacgccagtgcacagtcctgtcacggtg
aagatcgccagaccggataacacaacccgcttatcatttttggagcagctgaactcgccc
ggagcgctccggtcacccgggttcgaagcccaagccgacccctgctccagagagaccgtc
ctgagcgtgctcagagcgagccgtaaacgtgacgtcgatgacgaagaccgaggccacgag
gctgagcagaaaagcaaaaggaggcggaacgacagcggtgggagttctcattcagccttt
gagccactgctagcgaacggtgctccagcacagcttgtcccaaagcctggaagcttaaag
agagggatcaacgcctccgtggtggaggagtcctcctcgttaaagaggtctcgaacctcc
tccataagctcagttggcggaagcccggtcgcctgcggcgtgcctggatcagtccggaac
cccattcgtagctcttacagctcatctctaggataccctcagagaaaagtagcatctagt
ctggctatgtctcctctcgtgagccccggatcgtcacgatgccagacccccgacagggcg
gccaaaaagcccagggaggagaacgcctcgccggccgtttcctcactaaaatgtgataaa
gaaaccactgatacaggtcctggagtagtagaacgctcgtcgacgcccgaggtcccggtt
acgccgaggtcagactccggaggaagcagcggcaaacggaaacgcaagatccagttggta
tctgtgaacagaggagatcagatatcgctgcctccgccccctgaactgggttacactatt
actgtgaaggacctggacatggagaaaaaagctgctctcagccaaattcagaaagtcctg
aaggaacctgagccggagaagcccagttccacctctgcaccgaatccgacccctgctccc
tgtttagacatcttttccaaactagcctcatcgtccttaccctcatccgcccctgcgctc
agctccccatcgctggcgtctctagccacgtcatctgccggacctccgagcacctccggc
gcggcgtccactgcagcttcagcgcccacgatcgacctcaccgtcaccccctccagcatg
agcggtcccgcattggttccaacggcgatgctccctacactcgtcaccagcatcactaca
gtcaccgcggcccccaaactgacgaatccactactggagtccctgaaggacatgaagaga
atatcggcactgagttctcctcccacgacggctgctgctacctccacagctcctgaaacg
tctgtggcggcgcctcccgccagcgtcacctccgtctctctgagcatcggcgccgtgaag
tctgagccagcgctctcctccgcgccctccgccttcgccccggttctgtccaagcctctg
tcgtcgacgcctagcgcgttggccttcggagggggcggcgtcttgggccctgcttctacc
gcgcccgcgtcctctgcgcccgctccttctgccgcctcgacgctcactctcggcggtaca
gccggtctgaaaccggcagaatccgggttcaagcctattttcggggcgggaagtccagca
ctggtgtccacggcagaggtcaaacctactcaacccactttcaaacccatgttcgacggt
gcgttcggacagccggcgacatccacgtccgctagtgcgtctgcttcgcttttcggcggg
ataacaaacgctcaagcggcgtcttcggttccctcgacgacgtccggtacccccaatccc
accccctctctatttggcacaatgaataacagccacatggcttctttagtcccttcgtcc
acttcaaatacccagaattccactcagtctctgttcggtgctctcgctaacaccaagcca
gtcgctccctctgtcccttcgtccacctccagtaccccgaatttcactccatccctgttt
ggcggacttactaatagccagccggtcctctcgtccaccaccagtactcagaatcccacc
cagtccctgtttggtggacctaaacccacccagtctacgcctgcctcaatcccttcatct
aatcccaattcccaaaacaccaccgagtccctgttcggggcctggagcgcccctaacagc
acctttcagttcggagcttctgcagctaccacagcctcagcttcatctggaattaccacg
agcgccacgaccaccagcaacaccaacaccagtttccagttcggtgctttaaaaccagcg
cagagcgccccgtctgcggcgccccagagcgcgtttacgttcggccaaaacgcacccgct
acccaatttaccggaatcggtctggcaaacaattcaacaccgtcatcgacggccccgacg
actcaggccgcgttcggaacctcggcgttcagcgccccgaaacccttcggcaacgcccag
ccgtccaccccagccaagacttttgggtttaacgcaggcgcaggagggagcgcgccatcg
ttcggggcgcccgccagcaccgccgcgccgaccttcgccaactcgacgcagcccaccttc
ggaggaccctcatccggtttcaatttcgggaacaccagcgctccgacgatgaacgctccc
tccgggtcggccttcgcgttcggagcagcaccggccacgccccagaactctgcagcgtcg
ggtggcttcaatttctcagcgtcgctgcccgggacgcagttcgtaacgccggcggcgcag
cagcctcaggccggattttccttcggggctgccggcacggataataattctactttcgga
acttccacccctgcgttcggcggtgctggtggacccgtcatgttcggcagccccagtact
ccacaaggattcggagcccctgccctcgccacgccctcggcctcgttctccatcggcgcg
ggctccaaaacaggcagcgcacggcagagactgcaggcacgcaggcagcacacgaggaag
aagtaa
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