Trichomycterus rosablanca: 134332570
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Entry
134332570 CDS
T09921
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134332570 (smarcad1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134332570 (smarcad1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
134332570
NCBI-ProteinID:
XP_062870335
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All DBs
Position
18:2217240..2243061
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AA seq
922 aa
AA seq
DB search
MRNKDEPEILADLTETTVPETPEAKRPTGPGADQVVLVDSSSDSDVEISGSSMLSMGPGK
TEKNATQNLILHCEEEGDVTEVKMEHQEDLEQQTDSKAEPWRTSGSGDTVSKRRQEEMCD
DPQEGKKNIKKRRESETDDSADEGPEPTWKEQESMVKKLQRNFPHLNKDELRDVLHEHSW
VIEDALETLRMFSDHVVECDKPEAAPAPEPETVPPSPNLSPNPSTSAPQPEPFAPVNGTR
GTSKRSRQATTYKEQDSSSEDNASDFEGSSRPLIMDSDSDEVDEKLPKVKAQILDFFQKA
TADELAMIAGCSLKKAQKIIELRPYQTWSDLDDVLHRGNGLSTELLAGCREVLREREVVQ
GLMVRCEEISKKMAALAQKGLGSMVQPHILNSAFELKPYQLIGLSWLNLLHRNELSGILA
DEMGLGKTIQVISFLANLYQEGNRGPHLITVPSSTLDNWVRELNLWCPSLKVLVYYGSVE
ERKCIRYEILNEEVDYDIIVSTYNLTIGNSSDRSLFRKLRLEYAVFDEGHMLKNMSSLRY
RHLMAVNAKYRLLLTGTPLQNNLLELMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSF
EKDRIAHAKLIMKPFILRRVKSEVLKQLPAKEEQTEFCAMSEKQQQLYSDLFSKLKSSSS
TEKRELTNVMMQLRKMANHPLLHRQYYTGKRLSTMSKLMLKEPSHRDSDPALIEEDMRVM
SDFELHRLCQQYSALHQHQLTTDQLLDSGKFDHLGRLLTELKEKGDRVALFSQFTMMLDI
LEVLLKHHKHRYIRLDGSTPMSNRIVLIDQFNTDHDIFVFLLSTRAGGLGINLTSANVVI
LHDIDCNPYNDKQAEDRCHRVGQTRTVKVIRLISKDTIEDAMLRIGQRKLKLEQDMTTTT
QEGEEDTIPDDMASLLKASLGL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacaaagatgaacccgaaattctcgcggatctgaccgaaaccacagtgccggaa
actccggaggccaagcgccccactgggcctggagctgaccaagtcgttctggtggattcg
tcctctgattcagatgtagagatttcagggagctctatgttatcgatggggccaggaaag
actgagaagaatgcgactcagaatttgatcctgcattgtgaggaagagggggatgtaacc
gaggtgaagatggagcatcaggaagacctggagcagcagacagacagtaaagcagaaccg
tggaggacatccggcagtggagatacggtaagtaagaggaggcaggaggaaatgtgtgac
gatccccaggagggcaagaagaacatcaagaagaggcgcgagtcagagacggacgattcg
gcagacgaaggtcctgagcccacctggaaggaacaggagagcatggtgaagaaactgcag
cgtaacttccctcatctcaacaaggacgagctcagggacgtccttcacgaacacagctgg
gtcatcgaggacgccctcgagacgctgcgcatgttctccgatcacgtggtggagtgcgat
aaacccgaagccgctcctgctcccgaaccagagactgttcccccgagtccaaatctgagc
ccaaatcccagtacctccgcaccgcagccggaaccgttcgctccagtcaacgggacgaga
ggcacgtcgaagagaagccgacaggcgacgacgtacaaagagcaggacagcagctcggag
gacaacgccagcgacttcgagggatcgtccagacctttaatcatggactccgactcggac
gaggtggacgagaagctgcccaaggtcaaagcccagatcctggacttctttcagaaggcg
acggcggacgagctggcgatgatcgccggctgctccctgaaaaaagctcagaagatcatc
gaactgaggccgtatcagacgtggagcgacctggatgacgtcttacaccgaggtaacggc
ctctccaccgagctgctggctggctgtcgcgaggtgctgagggagcgagaggtggtccaa
gggctcatggtccggtgtgaggaaatctccaaaaagatggcagcactggcgcagaagggt
ctgggctccatggttcagccgcacatcctcaacagcgcgttcgagttgaaaccgtatcag
ctgatcggcctcagctggctgaacctgcttcaccgaaacgagctcagtgggatcctcgct
gatgagatgggtttgggaaaaaccatccaggtcatctcattcctggctaatctgtatcag
gagggaaaccgggggccgcacctcatcaccgtcccttcttctacactcgataactgggtt
cgggagctgaacctgtggtgtcccagtttgaaggtgctggtttactatggttctgtcgag
gaacggaagtgcatccgctatgagatcctgaacgaagaggtggactatgacatcatcgta
tcgacgtacaacctgaccatcgggaactcgagtgaccggagcctgttccgtaagctcagg
ctggagtacgcggtgttcgatgagggccacatgctgaagaacatgagctcgctgcgctat
cgccacctcatggctgttaatgccaaataccgtctgctgctgaccggaacgcctctccag
aacaacctgctggagctgatgtctctgctgaacttcatcatgccgaacatgttctccagc
agcacctcacagatcgccaagatgttctccatgaaatcctccgaggagcagagcagcttt
gaaaaggaccggatcgctcatgccaagctcatcatgaaacccttcatcctgcggcgggtc
aagagtgaggtcctgaagcagcttcctgctaaagaggagcagactgaattctgcgccatg
agcgagaagcagcagcagctttacagcgacctgttcagcaaactaaagagctccagcagc
acggagaaacgagaactgaccaacgtgatgatgcagctaaggaagatggccaatcaccct
cttctgcaccggcagtactacaccggcaagcgactgtccactatgagcaaactcatgctc
aaggagccgagtcaccgggactcagatccggctctgatcgaggaggacatgcgagtcatg
tcggattttgagctgcaccgtctgtgccagcagtactcagcacttcaccagcaccagctg
accacagaccagctgctggactctgggaagtttgaccatctcggacgccttctgaccgag
ctcaaagaaaagggtgaccgggtggccctttttagccagttcaccatgatgctggacatc
ctagaggtgctgctcaaacaccacaagcacagatacatccgactagacggatccacgccc
atgagtaacagaatcgttctgatcgaccagttcaacacggaccacgacatcttcgtgttc
ctgctgtccactagagccggaggactcggcatcaacctcacctcggctaacgtggtcatc
ctgcacgacatcgattgtaacccatacaacgacaaacaggccgaggaccgctgccaccgg
gtcgggcaaaccaggacggtgaaggtgatcaggctgataagtaaagacactatagaggac
gccatgctccgtattggtcagaggaagcttaaattagagcaggacatgaccaccactact
caggaaggtgaagaggacaccatccctgatgatatggcgtctcttttaaaagcctcgtta
ggactctga
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