Trichomycterus rosablanca: 134332589
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Entry
134332589 CDS
T09921
Symbol
wrn
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134332589 (wrn)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134332589 (wrn)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134332589 (wrn)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134332589 (wrn)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
134332589 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
134332589
NCBI-ProteinID:
XP_062870372
LinkDB
All DBs
Position
18:complement(22582765..22615522)
Genome browser
AA seq
1433 aa
AA seq
DB search
MVDRKLPEWMNKKLKQEDNGTQKVQVQSTIKKNLLENDLPYLEFGGTVIYSQEKNDSSFL
ADDLRSSLVPGSAVGFDLEWPPSFTKGKTKKVALVQLCASEERCYLFHISSMAGFPPALK
IFLEDESIKKVGVGIEGDQWKLLSDYEIKLKNFIELSDLANEKLKCVEKWSLDRLVKHLF
KKQLCKDNDVRCSFWDNFRLTEEQNRYAATDAYAGLIIYQNLERMVVNSGLLKDQDCLKA
KLFQIAREIEDLTYCIPDGLNCTNRTEMLVEDISKNVAALKDHITSNKNTSEVAAVEHSS
DSSKEHIPKLQESKSNTANHRADQRSSDDKNNNFISKKCVKKSCISDNDEEFSVQADQIK
CMMSLDISEYELQMLEMQARQEENEEQSILAFKEKAALDNSAELSYELESDEELDSELVQ
CAEEIEKLNESGDKEAHEAMAGDDDDEVVEEEEAEGFDASIPQPAPDQIDCLKKYFGHHS
FKPVQWKVILSVLEQKRDNLVVMATGYGKSLCFQFPSVYSENMSVVISPLIALMEDQVLQ
LKMSNIPACFLGSAQTKNVFADLKKGHYRVVYMTPEFCSGNLHLLEQLDRSIGISLIAVD
EAHCISQWGHDFRGAYRDLGKLKRNLPGVPIVALTATASPSIRDDIVKCLHLVNPLITCT
SFDRPNLYLDVNRKSGDIIKDLKPLLVKKEGGDYEFEGAAIVYCQSKKEAERVTGALCKL
GIRAGVYHAGLGIQKRRETQYQFMRDEIQCVVATVAFGMGINKPDIRKVIHYGAPKEMES
YYQEIGRAGRDGLNSACHVLWMPSDMALNRFLLNQTKSDKFRGYKMEMMAKMEKYLNSNK
CRRKSILSHFEDKQLRKVTSGIMGTSKCCDNCKFGHVMSPSKDFSQQDLQDFGTGAFQLM
GAVSAMGERFGITAPVLMLRGSTAQRVPECFRKHSLFGAGRTISEAWWKALGRELISEKY
LMEASGYNKFSTLCKLTPKGRTWLTKAQDEKHRTLCLQPNRDLCQRICVPRRSQDPKPTK
SSTEDGSTPSAAQRTSLWSQADTSKVRITGAAHVRSVPPPAPAAKPQVPAVSAREMELQG
ELYSKLVAQRQKLASIKDIPPAILATNKILLDMAKSRPCTVARLKLVDGVSEAKAAMLAP
LLQTIAEFCQKHGLQEVVISSSSTFCAEQSHSSQTGRTAALPLSDSVAVTYRLFQTEGKS
MRQVADARSLPMTVVESQLLQALNANKPLDTERAGLSSSIFSTITRIVSSPPLSSDLSDF
KIIRALVPEDISTFLLRLSVAKLQKEGFPNPLPANPPSEQHSITWIEPQTQPVMIEKASS
SRLLTHQQEPELHNMYMSEDELFAELPMPEDVEATSSGTQCNVEVVKLSSGMDLASWNQE
KLDKDTQDLFSNSPAKTVNQLPKRKLPDWAEDSQDSLTAAASKKTKKKKGLFG
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggttgacagaaagctgcctgaatggatgaataagaagctaaaacaggaagataatggc
acacagaaagttcaggtgcaaagtaccatcaaaaagaatctccttgagaatgatcttccc
tatctggagtttggtggaacagtcatatacagccaggagaaaaatgacagctcgttttta
gcagatgatttaagatcctctttggtgcctggctcagctgtgggctttgatttggaatgg
ccaccatcattcacaaaggggaaaacaaaaaaggtcgctttggtacagctttgtgcctcg
gaggagagatgttatctgtttcacatctcctccatggcaggctttcctcctgccctgaag
atctttctggaggatgagagcattaaaaaggttggcgtgggcatagagggtgaccaatgg
aagctgctgtctgattacgaaatcaagctgaagaattttatagagctttctgatttggca
aacgagaaactgaaatgtgttgagaaatggagtttggacagactggttaagcacttgttc
aaaaaacagctttgcaaagataacgatgtgcggtgcagcttctgggacaacttcagacta
acagaggaacaaaatcgatacgctgcaactgatgcttatgctggattgataatttaccag
aacctggaaagaatggtggtgaactcaggtttattgaaagaccaagattgcttaaaagca
aagctttttcagattgcaagagaaattgaagaccttacttattgtattcctgatggactc
aactgtacaaacagaactgaaatgttagtagaagacatttcaaaaaacgttgcagctctt
aaagatcacatcacgagcaacaaaaacacatcggaggttgcagctgtggaacattcctca
gacagtagcaaagagcacattccaaaactccaggagtctaagagcaacactgcgaaccat
agagctgatcagaggtcttctgatgacaaaaataataatttcatatccaagaaatgtgta
aagaaatcctgcatatcagacaatgatgaagaattcagtgttcaggcagatcaaatcaaa
tgcatgatgtccttagatatctctgagtatgagctacagatgctggagatgcaggccaga
caggaagagaatgaggagcagtccattttggcttttaaggagaaagcagcactggacaat
tctgcagagctgtcttatgaacttgaaagtgatgaggagcttgacagtgagttggttcag
tgtgccgaagaaattgagaaactgaatgaaagtggtgacaaagaagctcatgaagcgatg
gccggtgacgatgatgatgaggttgttgaagaggaagaagcagaaggctttgatgcaagc
attccacaaccagcacctgaccagattgactgtctaaaaaagtatttcggccaccacagt
tttaaaccggtacaatggaaagtgattttatcagtgctcgagcagaagagggacaacctt
gttgtcatggcaactggttatggaaagagcttgtgcttccagtttccttcggtgtacagc
gagaacatgagtgtagttatttcccctctaatcgcattaatggaggaccaggtgctgcag
ctgaagatgtctaacatacctgcctgctttcttggatcagcccagaccaaaaatgtattt
gcagacctgaaaaaggggcactacagagtggtatacatgacaccagagttctgctcagga
aatctacatctgcttgagcagcttgatagatcgattgggatttctctgattgcagtggat
gaagctcattgtatttctcaatgggggcatgacttcagaggggcttacagagaccttggc
aaacttaaaaggaaccttccaggtgttcctattgtggcgctcacagccaccgccagcccc
tctatccgagacgacatagtgaagtgccttcatttggtaaatcctctcataacctgcacc
tcttttgatcggcccaacctttatctggatgtgaaccgtaaatctggtgatatcatcaaa
gacctaaagcccctgctggtcaaaaaggaagggggtgattatgaatttgagggggcagct
attgtttactgccagtctaagaaagaagcagaaagggtgactggtgcactgtgtaagctg
ggcatccgggccggcgtgtaccatgcaggcctaggtatccagaagagaagggagacgcag
tatcagtttatgagagatgagatacagtgtgtggtggctactgtagcgtttgggatggga
ataaataagcctgatataaggaaggtcatacattatggagcacctaaagagatggagtct
tactaccaggagattgggcgagcgggtagagatggactaaacagtgcctgtcatgtatta
tggatgccgagtgatatggcactcaacagattccttctaaatcagacaaagagtgacaaa
ttcagaggttacaagatggaaatgatggccaagatggagaagtatttaaattccaacaag
tgcagaaggaagtcaattttgtcacattttgaggacaagcaactgagaaaagtcacctcc
ggtataatggggacgagcaagtgttgtgacaactgcaagtttgggcatgttatgagccca
agcaaagacttttcacagcaggatcttcaggactttgggacgggggctttccagctgatg
ggggcagtgagtgccatgggggagagatttggcatcactgctcctgtattgatgctgcgt
ggctcaactgctcaaagagttcctgaatgttttcgtaagcactctttgtttggtgctggg
aggaccatttctgaggcctggtggaaagccctgggccgtgagctcatcagtgagaaatac
ctaatggaggcatctggctacaataagttttcaaccctctgtaaacttactcctaagggc
agaacatggttaaccaaagctcaggatgagaaacacagaactctctgtcttcaacccaac
agggatctctgtcaaagaatttgtgtgccaaggagaagccaagatccaaaacctaccaag
tctagtactgaagacggctctacaccaagtgcagctcagagaacaagtctctggtctcaa
gcagatacaagtaaagtaaggattactggtgcggcacatgtcaggtctgttccaccacca
gcacctgcagccaaaccccaggttcctgctgtgtctgctagagagatggagttacagggt
gaattatacagtaagctggtagctcagagacagaagttagccagcataaaagacatccct
cctgctatactggctaccaacaaaatcctactggacatggccaagtcaaggccctgcaca
gttgctaggctgaagttggtggatggtgtctctgaggctaaagcagccatgctggcacca
ctgctccagacaatcgcagagttctgccaaaaacatggcctgcaggaggttgtgatttcc
agctcttctactttctgtgctgagcaatcccatagttcacagacaggaagaaccgcagca
cttcctttgtctgacagtgtggctgtaacatacagactctttcagactgagggcaaaagc
atgagacaggtcgctgatgctcgtagcttgccaatgacagtagtggaatctcagctgcta
caggctctgaatgccaacaagcctttggatactgagcgagcaggcctgtcttcatccata
ttcagcacaattacccgtattgtctcgtctcctcccctcagctctgacctcagtgatttt
aagataatccgtgccttggttccagaagacattagcactttcctccttaggctcagtgtt
gctaaactccagaaagaaggctttccgaatccattgcctgccaacccaccatcagaacag
cacagcatcacctggatagagcctcagacacagccagtcatgattgagaaagcctctagt
tcaagacttctgacacaccaacaggagccagagcttcacaatatgtacatgagtgaggac
gagctctttgctgagctgcccatgcctgaggatgtggaagctaccagcagtggtactcaa
tgtaatgtagaggtggtgaagctcagcagtggaatggatttggcatcctggaatcaggag
aagctggacaaagacactcaggatctgttcagtaattcaccagcaaagactgtaaaccag
ctgccaaagaggaagctgccggactgggcagaagattcgcaggactccttaactgctgcc
gcatcaaagaaaactaagaaaaagaaaggactttttgggtga
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