Trichomycterus rosablanca: 134332622
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Entry
134332622 CDS
T09921
Symbol
etf1b
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1b
KO
K03265
peptide chain release factor subunit 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134332622 (etf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134332622 (etf1b)
03012 Translation factors [BR:
trn03012
]
134332622 (etf1b)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134332622 (etf1b)
Translation factors [BR:
trn03012
]
Eukaryotic type
Release factors
134332622 (etf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
134332622
NCBI-ProteinID:
XP_062870421
LinkDB
All DBs
Position
18:complement(9211037..9220321)
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGAESSNPENDEKTLYLTPEQEKDK
SHFTDKETGQEHELLESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMDYQGEDDEIFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcggcggacaggaatgtggaaatctggaagattaagaagttg
attaaaagtctggaagcagccagagggaatggcacaagtatgatctccctcatcatccct
ccgaaggaccagatctcgcgggtggctaaaatgctggcggatgagttcggcacagcctcg
aacatcaagagcagagtaaatcgactttctgtgctgggagccatcacctctgtccagcag
agacttaaactctataataaagttccccccaatggactggtggtgtactgtgggaccata
gtgacagaggagggcaaagagaagaaagtcaacatcgactttgagcctttcaagccaatc
aacacgtcactttatttatgcgacaacaaattccacacggaggccctcactgcgcttctt
tcagacgacagtaaattcggcttcatcgtgatcgacggtagtggagcgctcttcggaacc
ctgcaaggcaacacgagagaggtgctgcacaaattcacagtagatctgcccaaaaagcac
ggaagaggagggcagtccgctctgcgattcgcccgcttgaggatggagaagaggcacaac
tacgtgaggaaggtggcggagacggctgtgcagctctttgtctcaaacgataaggtcaac
gtagccgggatggttcttgctggatcagctgacttcaaaactgagctcagtcagtcagac
atgtttgacccgaggttacaagccaaggtgctcaaactggtggacatttcttatggagga
gagaacggcttcaatcaggccatagaactgtctgcagaggtgctgtccaatgtcaagttc
attcaggagaagaaactaataggtcgttattttgacgagatcagccaggacactgggaag
tactgttttggagtggaggacacactgaaagctttggaaatgggagctgtagagatcctc
attgtatatgagaacctggacactatgcgctatgttctacgatgccacggtgcagaaagc
agtaatcctgaaaatgatgagaagacgctgtatctgacaccggagcaggagaaagataaa
tctcacttcacagacaaagagacggggcaggagcacgaactcctagagagcatgccgctg
ctggagtggtttgccaacagctacaagaaatttggggccacgctggagatcgtcaccgac
aagagtcaggagggctcgcaatttgtgaagggcttcggcgggattggtggaatcctgcgc
tacagggtggacttccagggcatggactatcagggagaagacgatgaaatctttgactta
gatgactactag
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