Trichomycterus rosablanca: 134332710
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Entry
134332710 CDS
T09921
Symbol
robo4
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134332710 (robo4)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
ROBO family
134332710 (robo4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_6
Pur_ac_phosph_N
DGF-1_4
fn3_4
Motif
Other DBs
NCBI-GeneID:
134332710
NCBI-ProteinID:
XP_062870530
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All DBs
Position
18:25715688..25738256
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AA seq
1130 aa
AA seq
DB search
MQLSVWLLCLICLCTWAKTSGQCKCLCTCSPEEQQLQEAPKSERPESKGKIRHRLAHERP
SRRDRNHRRKGSRLRPDEVSPRIVHHPSDVVVRVGSPATLSCRAEGNPEPSIQWLRNGVP
LEPEKMEGQSQPIILHEGSLFFLSVVPGRKGQSHEAVYACVARNSAGSAVSRNASLHIAA
LRDEFRMEPSDMEVAAGEMAVMNCSPPVGHPEPNVSWKKDGVPINTTDKHYTELNGKLII
APARKQDSGVYICVASNNVGVKESRAARLSVLEKPVIRREPQDVFVKLGESAHFFCDGQG
DPMPRLEWSREQGPLPNGRYLVNPDQSLQIHYVTLQDAGRYTCTVVSDVGVATASAQLFV
EDTDSSSQKDLHKELSALRISLENVTVLRAVSNMSQVMWKLQPSSSPLHYLQGFEVLYRS
LLPASSDWAAQKVAHPAVQTHVGPLKRGYKYEFKVRPYGSDLYGRESNTRHLRVPETVPS
APPQEVSITMPTDRNDTAQLSWEPPAHDAHNGIIQGYQVWCVQEEEQQYLNWTVDSGTHT
VEIKPLQPGKRYWLRVAAVNGAGIGAQSNPYQLLIDSKQESAPYHRNALNLSDVLALMRD
PVFIGSVGALLWCVLMVTAVCLYRKHIRPGGLGRGAHKTGLYRLASEDLIIKHRMAAPDS
PWISGAWKPECNGEQHKGQWTQKQELPDPKRTTLPMTAKKDSAVPIVPDNCGVYGTFYVD
LTGDGMKTFNSPARRTKMPHSKTQHHGTETIRITQTVAKPPAVSDGQVIPWKRALPSQPS
MGVRKESWEKNFKRELHAVNSAPLVPMHQHALLVRNAPTNHIHRLSQHTGGGPERVKALG
SPRIMQYSASLRFVDVLPTPPSLPMDDGHSISSEEGSSRSTKLTVDAGSLQSVCAASSGC
PSQHGPPYSRLSTASFCLSTNGHKDSALSTQTQEQYLELSPKPRRHSALAEKSSSLTRPF
SPTPTFGYICGPSEREVGDDVDDEPETVGLRRTALRSTPSSCFSEWEGSLWNGWGSTSEG
NMQSARTSIISSSDGSFMNDANYARILAMTGETVTGTLSDFSPPGSPLSMLFPPRDCFGE
VDPLAVWDFSTTWVEEMEAQIRASAVPGGPAASSLDSTRPELPYKSTSQR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcagctctcggtttggctgctctgcttaatatgcctgtgcacatgggcaaagacttca
ggtcagtgtaagtgtctctgtacctgttcacctgaggagcaacagctacaggaggctcca
aagtcagaaaggccagagagtaaaggaaagattagacatcgtctggcacatgaacgtcca
tcacgcagggacaggaaccaccgcaggaaaggttccagactgcgcccagatgaagtctcc
cctcgtatcgtgcatcacccgtctgacgtggtggtgcgggttggaagtcctgccacgctg
tcctgccgagccgaaggaaaccctgaaccctccatccagtggctgcgcaacggtgttcca
ctggagcctgaaaagatggaaggccagtctcagcccatcattctacatgagggcagcctg
ttctttctcagcgtggtgcctggaaggaagggccagtcccatgaagcggtgtatgcctgt
gttgcgcgaaacagtgctggctctgcggtcagtaggaacgcctctttgcatatcgcggct
ctgcgagatgagttccgcatggagcccagcgacatggaggtagccgcaggagagatggcc
gtgatgaactgcagtccacctgtagggcatcctgaacccaatgtcagctggaagaaagac
ggcgtccctatcaacaccacagacaaacactacactgaactgaatggaaagctgataata
gctccagcacggaagcaggactctggagtttacatctgtgtggcttcaaacaatgttgga
gtgaaagaaagcagagcagccaggttatcagttctggagaagccagtgatacggcgtgaa
cctcaggatgtttttgtgaagctcggggagtcagcacacttcttctgtgatggtcaggga
gaccccatgcccaggctggagtggagcagagagcagggaccactacccaacggcaggtat
ttggttaatccagaccagagtctccagatccactacgtgacgttacaggatgctggcaga
tatacctgtactgtggtcagtgatgttggagtggctacagccagtgctcagctctttgtg
gaagatacagacagcagcagccagaaggacctgcataaagagctgtctgcacttcgcatc
agtctagagaacgtcactgttctgagagctgtttcaaacatgtcacaagtcatgtggaag
cttcagccatcatcctcaccactacactatctgcaggggtttgaggtgctctatcgttct
cttttacctgccagctcagactgggcagctcaaaaagttgcccatcctgcagtccagacc
cacgtaggtcccctaaaaaggggctacaagtacgagtttaaagttcggccgtatgggagt
gatctgtatggcagagagagcaacaccaggcacctgagagtaccagagacagttcccagt
gctcctcctcaggaagtgtccataacaatgcccactgaccgaaatgacacagcacagctg
agctgggaaccaccggcacacgatgcgcataacgggatcattcagggataccaggtgtgg
tgtgttcaggaagaggagcagcagtatctgaactggacagtggacagtggaacacacact
gtggagatcaagccactgcagcctggcaagcgttactggctccgagtagcggcggtaaat
ggtgctggcattggagctcagagtaacccgtaccaactgctcatagactcaaagcaggaa
tcagctccatatcaccgaaatgccctaaacctgtcagatgttttggcgttaatgagggat
ccagtgtttatcggcagtgttggtgctctcctgtggtgcgtgctgatggttacagctgta
tgtctgtatcgaaaacatatcagacctggtggtttaggaagaggagctcacaaaacaggg
ttgtatcgtctggctagtgaggacctcatcatcaaacacaggatggcggccccagattct
ccatggatctctggagcatggaaacctgagtgtaatggtgaacagcacaagggtcaatgg
acacaaaaacaggagctcccagaccccaaaagaactactctgcccatgacagcaaagaaa
gactcagccgtgcccatagtgccagacaactgtggcgtttatggcaccttctacgtggat
ttgactggtgacggtatgaaaacgtttaacagtccggctcgacgtaccaaaatgcctcac
tcaaaaacacagcatcacggcaccgagacgatacgcattactcagaccgtagccaagcca
cctgccgtcagtgacggccaggtaattccatggaaacgggctctccccagccagcccagt
atgggtgttcgtaaggagtcctgggagaagaactttaaacgagagctgcatgcggtgaac
agtgctcctttagtgcccatgcatcaacatgccctactggttcgcaacgcccctaccaat
catatacacagactcagccagcacacagggggagggccagagcgtgtgaaggcattaggt
tctcccaggattatgcagtactcagcctcgctgcgttttgtggatgtgctgcccactccc
ccttccctgccaatggatgatggccatagtatcagctcagaggaaggctcgagccgctcc
actaaactgacggtagatgctggctccctgcagtctgtgtgtgcagcatcttctggctgt
ccctcacaacacggtcctccttacagccgcctctctacggcctccttctgcctgtccact
aacggccacaaggacagcgcgctgagcacccagacacaggagcagtacctcgagctcagt
cctaagccacgcagacacagtgccctggctgaaaaatcctcctccttgactcgtccgttc
tctcccacacccacgttcggttacatctgcggaccctctgagcgggaggtaggagatgat
gtggacgatgagccggagactgtagggctgaggagaaccgccctgaggagcacaccctcg
tcttgcttcagcgaatgggagggctcgctgtggaacggctggggatccacgtctgaggga
aacatgcagagcgcgagaaccagcataatcagctcttcggatgggtccttcatgaacgat
gccaactacgctcgcatcctggccatgacgggagagacggtgactggaactttatcagat
ttttcaccgccggggtctccgctgagcatgctgtttcctccgcgggactgtttcggggag
gtcgaccctctggccgtgtgggattttagcacaacctgggtggaggagatggaggctcag
atcagggcgtccgcagtgcccggaggacctgcagcatcttccctggacagcaccaggccc
gagctcccgtacaaaagcacctcacagcgatga
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