Trichomycterus rosablanca: 134332836
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Entry
134332836 CDS
T09921
Name
(RefSeq) m7GpppX diphosphatase-like
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134332836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134332836
Enzymes [BR:
trn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
134332836
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
134332836
3'-5' decay
Other 3'-5' decay factors
134332836
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
HIT
CEP170_C
Motif
Other DBs
NCBI-GeneID:
134332836
NCBI-ProteinID:
XP_062870737
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All DBs
Position
18:complement(10659032..10669339)
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AA seq
231 aa
AA seq
DB search
MQFCEEAETVDTSRLNKRIGIKTTVICPATEKHVKKYLRQETFLINETEDDYRSITLPHI
TQQSFSVQWVYNILEKKAEADRIVFEDPDPHVGFVLLPDFKWDQKQLEDLYLIAIVHRRD
LKSLRDLTPDNLPLLRNILEKGVEAIGKKYNVPSSKLRMYLHYQPSYYHIHVHFTSLDYE
APGCGVERAHLLTDVIQNLQVQPEYYQKRTLTFPIRADDALLTKFREAGKI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctgtgaggaggcagaaacggtcgacacgtcacgacttaacaagcggatagga
atcaaaaccactgtgatctgcccagcaacagagaagcatgtgaagaaatacctgcgccag
gagaccttcctcatcaacgaaactgaggatgattatcgttccatcactcttcctcacata
acccaacaaagcttcagtgtgcagtgggtttacaacattctggaaaagaaagctgaagct
gacaggattgtgtttgaagatccagaccctcatgtcggctttgtcctcctgccagatttt
aaatgggaccagaagcagctggaggatttatatctgattgccattgtacatcggcgggac
ctgaagagtttaagagatcttactccagacaatcttcctttattaagaaacatccttgaa
aagggggtggaagccattgggaagaagtacaatgttccctcgtctaagctgcggatgtac
ctgcactaccagccgtcctactaccacatccatgtgcacttcacctctctagattatgaa
gctccaggatgtggagtagagagagcacatctgcttacagatgttatacagaacctgcag
gtccaacctgagtattaccaaaaacgcaccctcaccttccccatacgggcagatgatgca
ctgctgaccaagttcagagaagcaggaaagatttag
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