Trichomycterus rosablanca: 134332875
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Entry
134332875 CDS
T09921
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
trn00535
]
134332875
04091 Lectins [BR:
trn04091
]
134332875
Proteoglycans [BR:
trn00535
]
Cell surface proteoglycans
Others
134332875
Lectins [BR:
trn04091
]
C-Type lectins
Others
134332875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
TMEM154
Motif
Other DBs
NCBI-GeneID:
134332875
NCBI-ProteinID:
XP_062870777
LinkDB
All DBs
Position
18:complement(4437252..4457353)
Genome browser
AA seq
2334 aa
AA seq
DB search
MWRFVQGVRTSLWKLFLLLLVMRGLVSGASFYGDGFVQQKTVESSSKNSLHVRFRTSSPS
GLLFLATGETDFLWVALQFGHIQAQMDFGSGERTLWSEKGTLLNDLAWHSIELQHNEHNV
TLTVDKTSHSSVRMPGPDLELSIQDGLYVGGLDNLDKLYLLNEMSHVGFRGCLDEVLFNE
HNLLSSLRPYSGYKTVHEVSLGCSPQFSGTINDSISFFSSKAYVSLPTWEVPQEGMFECE
FLTSAEDGLLLYSTAGKGDYVALEIRNKHLIAVLRVGGSKTTLSSITAVNTGGWHSVQLF
VAPRTLHLTINDEMLNSSFGVKSQTLQLNGPLFLGGVDAGTYAEVRRNGLLSVVGKHIGG
GSFKGCLKNIKINDHTVGLPNALVTKDVSVGCEPVKHVALITTTTPEILQPYTSQSVQQD
KKHLKTFLVLKDLEVLEGGRAPLEAKHIKVNLDFHKLKIHQSQIIFRIEEQPVHGQLRLD
VDYAGQENTFSMLDLWYGRIMYVHGGFEDSQDFFMFSVFTSTKKEVPGYLNGNRLHRFNI
TVMPINDTPELSLPEGNHFILLKNSKRPLTTDMLRATDPDTNATDLVFTLLGNLTADSGF
LELEDNPGKAVNTFSYLDLEQGKVSFVHTGVKNSRMAIRVSDGEHVSNMVIIRIMAVTLE
HKIINNRGIDVIQGESSNIGIRHIAVQVNIPKQAVEIRYDVTELPIYGELQRLHSSGEWK
QTSTFTQKLLEKERLRYLSTFKRTQLRNLTDSFKCKISIGSVSADEILVLVRVKWIHYKV
TRSKMEVDSNTKVTITPQEFKIVSKGLKLSEDDIHIRLLSLPKRGSLLLNDEPQKKNSTF
SQRDITNHSLHYKLFEKALEDLKDVFSFQVFSKHSFSEKHDFRINIKANVDKIVLRNNGL
YLLEGHSRVITKNMLFVETHSNRTVHYSIMSSPQHGKLIKINNSSSNTSGNSIVEFSNQD
ILEEHILYIHDNSETTCDAFTFCASVSSLKDQALITTKGIYNISIQLVNDEKPVRVVDKV
FHVVRDSQKLLTLEDLCYHDPDSDYDDGQLLYTRRGIPVGELVLVNNTSHKLYQFRQRDL
EEKRVLFIHKGVSYGRFVFFVSDGKHYTSSLLEVSAQDPYLIVANNTGLLVKKGQNVIVR
STNFSVTTNMDVRSDEDVLFEIFLPPSHGTLLCDGIEADAFTQYDLKAGHVVYSHDDSRN
LKDSISLTATVNGLRLDVTVGVKVYLESHQQPPQVTHNSTVVVEEGKPVQISKEQLEPDT
NDCIRVMEVGRVYCHCRNVVKPLLSGHVICFVVPLDVLNITVKEGSSKALTQEVIKISSH
HFKGLHFLYHVIEGPHHGRIEHSRIPGVPIPSFTSLQVENKFIFYIHDGSETTTDNFTLI
VNNTDLHKQSIPHVLHVTITPVNDEAPVVTANRILKVWVDSVTQITTDDLSATDLDSPPE
SLEFIITPPSNGHLALKSAPSRPVLNFTQAHIQHGQLVFVHTGAMSGGFHFQVNDGKIFA
PRQIFSITARSFVLSLERNCELKVFPGSSEVISEAHLLIVSSDHDDIDGNHTIVYSVTSP
PRLGRLVCVQEDDSTDMKPISTFTQNMVNAGVVVYEQTESVGWTTRDSFIFTVSSPPASI
PSHTFNIHISYDNTGPEHRSVLLVNTGAAVPEGGQVRIKKSNLDASNLLVKLPIEERHTY
EIWFRVTTLPRCGTIVVGDRNLTNEKPYFSQLTLSKYGIVYVHDDSETFLDSFSFDVWLN
PKGKHVQQSQETDLMVSETFNITVTPVNDLPPLLRTKAPGVSVVEGDTVTLGPDNLHVED
GDTLPEDIYFTMISKPNNWYLALEGRFNESLDNFTQADVNKQRVHFVQNGSPSSERIYFS
ITDGSHTPLYHVFNLEVQNITLNVVNNTGLTLLQGQTEGIITLEHLAAVTNKRNATIKYY
ITTPCHGRLLKMDKQVTHFVQEDLKSGRVKYQMTDLSSSWDRFEFSVLTTGNNLTDQVFN
VIVRPLIQLKEHIQIPAGISVKLERDVLNATELASITDSDPIFEIIVPPRHFQLVKVTAD
GNSESVESFSFRDVEQGRIAIEEHINLNSVDAQNKTVNATESFVFILKAANVQPAKGEFV
FTVLPYDPTTTKHGISKVPLQPTRLPLFDRTTNYVSLVNQTSQSISTTRSHWFPSKTKPR
NRWGNHTRGRFPVSTVPKSTATKHKSPHKNIPVRVESLPRPAADPLLIILPLLACLLLIV
ILVVLILVLRHQREKRTQPAVIEVHPENSTEDLVPQSPYLGKPERSITVPSVVVTPLTQR
CQRGPVLDATHNGSLLPTIALPDSSMLQWTSLDSEGSQQCPSGTPNLRPNQYWV
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtttgttcagggtgtgagaacttcactgtggaagttatttttactgctgctg
gtgatgagaggactggtgagtggagcctctttctatggagatggttttgtacagcagaaa
actgtggagtcctccagtaaaaactccctccatgtgcgctttcggacctccagccccagt
ggattactgttcctggctacgggggagacagatttcctctgggtggcgttacagtttgga
catattcaggctcagatggactttggatcaggagaacgaaccctatggtcagagaaagga
actcttctgaatgacctagcctggcattccattgaactccaacataatgagcacaacgtc
acgttgacagtcgacaaaacctctcatagcagtgtgaggatgccaggccctgacctggag
cttagtattcaggatggactctatgttggtgggcttgataacctggataaactctacctg
ttaaatgagatgtcccatgttggctttcgaggctgtttagatgaggtgctctttaatgaa
cacaatctcctatcatccttaagaccttattctgggtataaaacggtccatgaggtctca
ttagggtgcagccctcagttttctggcactatcaatgactccatcagtttcttcagttcc
aaagcgtatgtgtctttgcctacatgggaggtgcctcaggaagggatgtttgagtgtgag
ttccttacatcagctgaagatggacttctgttatacagcactgcaggaaaaggggactat
gtggcactggagatacgaaacaagcaccttattgctgtgctcagagtaggtggtagcaag
acaacactgtcatccataacagcagtgaacacagggggctggcactctgtacaactcttt
gtagccccaaggacacttcatttgaccataaatgatgagatgttaaattccagctttgga
gtaaagtctcaaactctccagcttaacggacccctcttcttgggtggggtggatgctggg
acatatgcagaggttcgcaggaatggcttactctctgtcgttggaaagcacataggtgga
gggtcctttaaaggctgtcttaaaaatatcaaaatcaatgaccacactgtgggtctgcct
aatgctttggtcaccaaggatgtctctgttggttgtgagccagttaaacatgtcgctctg
atcacaaccacaactcctgagattcttcagccatacacatctcaatcagttcaacaagac
aagaaacaccttaagacctttttagtactcaaagacttggaggtcctggagggtggacga
gcacctcttgaggcaaagcacatcaaggtgaacttagattttcacaagcttaagatccat
caatcccagattatatttcgcattgaggagcagccagtccatggacagctgaggcttgat
gttgactatgctggtcaggaaaataccttcagcatgttggacctttggtatggcagaatt
atgtatgtccatggaggctttgaagattctcaggacttctttatgttttctgtttttacc
agcaccaagaaagaggtgcctggttatctaaatggaaaccgcttgcacaggtttaacatc
accgtcatgccaatcaatgataccccagagctcagccttcctgaggggaaccactttatt
ctacttaagaactccaaacgacctctgaccacagacatgctcagggctaccgaccctgac
actaatgccacagacttggtttttactctgcttggtaaccttacagcagattctggattc
ttggaacttgaagacaatcctgggaaagcagtgaataccttctcgtacttagatctagag
cagggtaaggttagttttgtccacactggtgttaagaactctaggatggccatcagggtg
agtgatggggaacacgtaagcaatatggttattataaggattatggctgtcacattggaa
cacaaaattataaacaacaggggaatagatgtgatccagggtgaaagttccaatattggt
attagacatatagctgtgcaagtaaacatacccaagcaggcagtggaaattcgttatgat
gtaacagagctgccgatttatggcgagttgcaaaggttgcattccagtggcgagtggaag
cagaccagcaccttcacacagaaacttctggaaaaagagcgactcagataccttagtact
ttcaaaagaacccagttaaggaatcttacagacagctttaagtgcaaaatcagtattggt
tctgtatctgcagatgaaattcttgttctggtaagagtcaaatggattcattacaaagtg
acaaggagtaagatggaggtagacagtaacacaaaagtcacaattacccctcaggaattt
aagatagtatctaaaggtttaaaattgtcggaggatgatattcacatacgcttgctgagt
ttaccaaagagggggtctttgcttttgaatgatgagccccaaaagaagaactccaccttt
agtcagagggacatcacaaatcacagcctgcactataagctctttgaaaaagcactcgaa
gacttgaaagatgtgttcagctttcaggttttttcaaaacactccttctctgagaaacat
gacttcaggattaatatcaaagcaaatgttgataaaatagtcctgagaaataatggactt
tacctcttggaagggcacagtagggtcataaccaagaatatgctttttgtggagactcac
agcaacagaactgtacactattccatcatgagcagccctcaacatggcaaattaataaag
ataaacaattccagttccaacaccagtgggaacagtatagtagagttctcaaatcaggac
attctagaggaacacattttgtacattcacgacaacagtgaaaccacatgtgatgccttt
acattttgtgcctctgtgtcatcgctaaaagaccaagctctaataaccacaaagggcatc
tacaacatctccatccagttggtcaatgatgaaaaacctgtccgtgttgttgataaagta
ttccatgttgtccgtgacagccaaaagcttttgaccttggaggatctttgttaccatgac
cctgattcagactatgatgatggacagttgctttataccaggcggggaatcccagtgggt
gagctagtcttggtaaacaacacatcccacaagctttatcagttccgtcagagagatctt
gaagaaaagcgggtgttgtttatacacaaaggtgtgagctacgggcgctttgtcttcttc
gtatccgatggcaagcattatacctcaagccttttggaagttagtgcccaggatccatat
ttaatagtggctaacaacacaggtctactagtcaagaaaggccaaaatgtaatagtgcgc
tctaccaacttcagcgtgaccaccaacatggatgttcgaagtgacgaagatgtgctgttt
gagatatttcttcccccatctcatggtactttactgtgtgatggaatagaagcagatgct
tttacacagtatgatctgaaggcaggacatgtagtttacagtcacgatgacagcagaaac
cttaaggactccatcagtcttacagctacggtaaatggactgcgtctggatgtgaccgtg
ggagtaaaagtgtaccttgaaagccatcagcagcctccacaagtgacacacaacagcact
gtagttgtggaagaaggaaaaccagttcagattagcaaagagcaacttgagccagacact
aatgactgtatcagagttatggaggtcggcagggtttattgccattgcagaaatgtggtg
aaacctctgctttctggtcatgtaatttgttttgttgtaccactggatgttttaaacata
accgtaaaggagggatcttcaaaagccttaactcaagaagtcattaaaatcagcagccat
cacttcaaagggctccacttcctgtaccatgtgatagagggtccacatcatggtcgtata
gagcactccaggatacctggtgttcctatcccatctttcaccagtttgcaggttgaaaac
aagtttatattctacatccatgatggcagtgagacaacgacagataatttcacactcatt
gtaaacaacacagacctccacaagcagagcatccctcatgttctacatgtgactataaca
cctgtaaatgatgaagctcccgttgtgactgccaacaggatcctaaaggtatgggtggat
tctgttactcaaatcaccactgatgacctcagtgctactgaccttgactctcctcctgag
agtctggagttcattataactcccccgagcaatggacacctggcccttaagagcgccccc
tctagacccgtcctgaatttcacccaggctcacatccaacacggccagctggtcttcgta
cataccggtgccatgtctggtggattccactttcaggtcaatgatggaaaaatttttgca
ccaaggcaaatcttcagcatcactgccagatctttcgtcctcagcctagagaggaactgt
gaactcaaagtgtttccaggttcctcagaagtcatttctgaagctcacttgttgattgtc
agcagtgaccatgatgacattgatgggaatcacactattgtttattctgtcacctctccg
ccgagactgggcagactggtctgcgtgcaggaggacgattccacagacatgaagccaata
tccacattcactcaaaacatggttaatgctggtgtggttgtatatgaacaaactgaatca
gttggatggacgacaagagactccttcatcttcactgtgtcttcaccccctgcctccatc
ccatctcacacattcaacatccatatctcctatgataacaccggcccggaacatagaagt
gttctactcgtcaacacaggtgctgctgtccccgaaggcggtcaagtcaggattaaaaaa
tctaatctggatgcatcaaatcttttggttaagttgccaatagaagagcgtcacacatat
gagatctggtttcgagtcactacactaccacgctgtgggaccattgtcgtaggtgatcgg
aacctgaccaatgagaagccgtacttttcccagttgacccttagcaaatatggcattgtg
tacgtgcatgatgactcagagacctttttggacagttttagttttgatgtgtggttgaat
cccaaggggaaacatgttcagcagtcccaggaaactgaccttatggtctcagagactttc
aacattacagtgaccccggttaacgatctgcctcctttacttagaaccaaagcgccgggt
gtttcggtggtcgaaggagacactgtcactttaggtcctgataaccttcatgtagaagat
ggggacactttacctgaggacatttatttcaccatgataagcaagcccaacaattggtat
ctggccttggaaggtcggtttaatgagtctttagacaattttacccaggctgatgtgaat
aaacaaagagtacactttgttcaaaatgggtctccatcttcagaaaggatctactttagc
ataaccgatggttcacatacaccactctaccatgtgttcaaccttgaagttcagaatatc
accctgaatgtggtaaataacactggtttaactcttttacaaggacagactgaaggaatc
ataacacttgagcacttggcagcagtgaccaacaagagaaatgcaactataaaatactac
ataacaacaccatgtcatggaaggctcctaaaaatggacaagcaggtcacacattttgtt
caggaggatcttaagtctggcagagtaaagtatcaaatgacagatttatcctcatcatgg
gatcgttttgagttctcagttcttaccactggtaacaacttgactgaccaggtctttaat
gtaatagtcaggccactgattcagcttaaagaacacatccaaattcctgcaggtatctct
gtaaagttagagagggatgttctaaatgccactgagctggcttccatcaccgacagtgac
cccatctttgaaattatagttcctccgagacatttccagttggtaaaggtgacagctgat
ggtaattcagaatctgtggaatcattttcctttagagatgttgagcagggaaggattgcc
attgaggaacacatcaatctcaattctgtagatgcgcagaacaaaactgtaaatgcaacc
gagtcgtttgtcttcattttaaaggcagcaaatgttcaacctgccaaaggagagtttgtt
ttcacagtcttaccatatgaccctactaccacaaaacatggtatttcaaaagttcctctg
cagccaaccagacttcctctatttgacagaaccacgaattatgtttctcttgtaaaccag
acatcgcaaagtatttcaaccacgagatcacactggtttccttcaaagaccaagccaagg
aatcggtggggtaaccacactcgaggcagattcccagtttccactgtgcccaagtccaca
gccactaaacataaaagccctcacaagaacattccagtcagggtagagtctctaccaaga
cctgcggctgaccccctgctgataatcctacccctcctggcctgcctcctgctcattgtt
attctggttgttttaatcctggttttaaggcaccaaagagaaaagcgaacccagccagct
gtgatagaggttcatcctgagaactctacagaggacctggttccccagagtccttatctt
ggaaagcctgagagaagcataactgtcccctctgttgtagtgaccccacttacccagaga
tgccaaagaggccctgtcctagatgcaacacataatggatcactgctaccaacaatagca
cttcctgactcttcaatgctccaatggacttcactggactcagaaggaagtcagcagtgc
ccatctggcacaccaaatctcagaccaaatcaatactgggtttga
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integrated database retrieval system
