Trichomycterus rosablanca: 134332969
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Entry
134332969 CDS
T09921
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
trn
Trichomycterus rosablanca
Pathway
trn04142
Lysosome
trn04144
Endocytosis
trn05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134332969 (cltca)
04142 Lysosome
134332969 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134332969 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134332969 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134332969 (cltca)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
134332969 (cltca)
Exosome [BR:
trn04147
]
Exosomal proteins
Proteins found in most exosomes
134332969 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
134332969
NCBI-ProteinID:
XP_062870898
LinkDB
All DBs
Position
18:complement(21710544..21741736)
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AA seq
1679 aa
AA seq
DB search
MAQILPIKFQEHQQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPMKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPNGN
QPFSKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLVTKFGYIHLYDLETGTCIYMNRISG
ETIFVTASHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFSAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDIVKAVDPTLALSVYL
RANIPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRVSPDQGLQFAQMLVQDE
EPLAEITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANLRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDSEVHFKYIQAACKTGQIKEVERICRESNCYDPDCVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSCVVGKYCEKRDPHLACVAYERGHCDQELIHVCNENSLFKSLSRYLVRRRDADLWASVL
LETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRSRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFKKFDVNTS
AVQVLIEHVGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAEMEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVYLGEYQAAVDGARKANSTRTWKEVCFAC
VDGNEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKESQFKDIITKVANVELYYKAIQFYLEFKPMLLNDLLIVLSPRLDHSRAVNFFT
KVKQLPLVKPYLRSVQNNNNKSVNEALNNLFITEEDYLALRTSIDAYDNFDNITLAQRME
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMLYASESKDMELAEELLQWFLQE
EKKECFASCLFTCYDLLRPDVVLETAWKYNIMDFSMPYFIQVMREYLSKVDKLETSESLR
KEEEQATEAQPIVYGTPQLMLTAGPSVPVPPQQAYGYNYSAAPGYPQAPQVQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattctgcccattaaatttcaggagcaccagcagctccaaaacctcgggata
aacccggccaacattgggttcagcactttgacaatggaatcggataagttcatctgcatc
cgggaaaaggttggagagcaggcgcaagtggtgatcattgacatggcagacccaaacaat
cccatccgccggcccatatctgcagacagtgccattatgaaccccgccagcaaagtaatt
gccctaaaagctgccaaaacgctccagatctttaacattgaaatgaagagtaagatgaag
gcccacacgatgactgatgatgtcactttttggaagtggatctccctcaacacagttgct
ctggtgactgataatgccgtctatcactggagcatggagggcgactcgcagccaatgaaa
gtctttgatcgccattccagcctggcaggatgtcaaattattaactatcgtacagatgcc
aagcaaaaatggctcctccttatcggcatctcagctcagcaaaacagagttgtaggagca
atgcagctgtactcagtggacaggaaggtctctcagcccattgagggccatgctgccagc
tttgctcaattcaaaatggaaggaaatgctgaagaatcgactctgttctgttttgctgtt
cggggccaagcaggtggaaagcttcatataattgaagttgggactcctccaaatggtaat
cagcccttttcaaagaaagctgtggatgtattctttcctcccgaggcacagaatgacttc
ccagtggccatgcagatcagctccaaacaggacgttgttttccttgtgaccaaatttggc
tacattcacctttatgacctggagacaggcacctgtatttacatgaacagaattagcggg
gagaccatttttgtcacagcatctcatgaggctacttctggaatcattggtgtcaacagg
aaaggacaggttttgtcagtttgtgtggaggaggaaaacatcattccctacatcaccaat
gtgctgcagaatcctgatctggcccttcgtatggctgtgaggaataacctggctggagct
gaggagcttttcgcacgcaagtttaacaacctgttttctgcagggaactactcagaggca
gcaaaagtggctgccaatgctccaaaaggcattctgcgcactccggacaccatcaggcgc
tttcaaagtgttccagctcagccaggtcagacctctcctctcctgcagtactttggcatc
ttgttggatcagggccagcttaacaagtttgagtcactggagctgtgcaggcctgtcctg
cagcagggccgcaaacaactgctagagaaatggcttaaagaggacaagttggagtgctct
gaggagcttggcgatattgtaaaagctgtagatcccacgctggcgcttagcgtctatctg
agggcaaacatccccaacaaagttattcagtgctttgctgaaactggccagtttcctaaa
attgttctttatgccaaaaaggtgggttatactccagactggatattcctgttgagaaat
gtaatgcgcgttagtccagatcagggtcttcagtttgcacagatgctagtgcaggatgag
gagccactggctgaaattacacagattgtagatgtattcatggagtacaacctgattcag
cagtgtacctcatttcttttggatgctctgaaaaacaaccgtccatcagaaggacctctg
cagacacgtctgcttgagatgaacctcatgcatgcacctcaggttgctgatgccatcctg
ggaaatcagatgttcacaaattacgaccgtgctcacattgctcagctttgtgagaaagca
ggtcttctgcaaagagcactggagcactacactgatctgtatgacattaaacgggctgtc
gtacacacacacctactcaacccagagtggctagtgaactactttggctccttgtcagtg
gaagattctctggagtgtctaagagccatgctttcagccaacctcagacagaatttgcag
atctgtgtgcaggtggcttccaaatatcatgagcagctttccacccagtccctcactgag
cttttcgagtcgtttaagagttttgaaggtctgttttactttcttggctccattgtgaac
ttcagccaggactcagaggtacatttcaaatacattcaagctgcctgcaaaaccggccag
atcaaagaggtggaacgcatatgcagagagagcaactgttatgaccctgattgtgtaaaa
aactttcttaaggaagctaaactcactgaccagctaccactcatcattgtgtgtgaccgc
tttgacttcgtccatgacctggtgctctacctgtaccgtaacagcctccagaagtacatt
gagatctatgtacagaaagtaaaccccagtcgcttgccagttgtaattggcggtctgctg
gatgttgattgctctgaggatgtgattaagaacctgatcctggtggtgagaggtcagttc
tccactgatgagctggtagctgaggtggagaagcgaaacagactgaagttgctgctacct
tggctggaagctcgcattcacgagggttgcgaggagcccgctacccataatgcccttgcc
aaaatctacattgacagcaacaacaacccagaacgctttctgcgggagaacccttattat
gacagttgtgtggttgggaagtactgtgagaagagagatccccatctcgcttgtgtggcc
tatgagagaggccactgtgaccaggagctcatccatgtgtgcaatgaaaactccttgttt
aaaagtctgtcccgttatctggtacgtcgccgggatgcagatctatgggccagtgtcctt
ctagagactaacccataccgaagacctcttattgatcaggtggtgcagactgctctgtca
gagactcaggatccagaagaagtttctgtcactgttaaggcttttatgacggctgatctg
ccaaatgaactcattgagcttttggagaagatcgtcttggacaattctgttttcagtgaa
cacaggaatctgcagaacttgctgattttgactgccattaaagcagatcggtcacgtgtc
atggagtacattaatcgtttggacaactatgacgcacctgacattgccaacattgccatc
agcagtgagctttttgaagaggcatttgccatctttaagaaatttgatgtcaacacttca
gcagtgcaggttctaatcgagcacgttggaaatctggaccgggcgtatgagtttgctgag
cgctgtaatgagccacctgtgtggagccagctagctaaagctcagctccagaaaggctta
gttaaagaggccattgactcctatatcaaggctgatgacccctctgcttacatggaggta
gtgcaagcagcagaccagagtggtaactgggaagacttggtgaagttcctgcagatggca
cgtaaaaaggccagggagtcatacgtagaaactgagttgatctttgctctggctaaaacc
aatcgactggctgagatggaagagtttattaacggccccaacaatgcccacatccagcag
gttggtgatcgttgctatgatgaaaagatgtacgaggctgccaaattactctacaacaat
gtgtctaactttggacgcttggcttccaccctggtttatcttggagaataccaggctgca
gtggatggcgctcgcaaagctaatagcacacgcacatggaaggaggtgtgttttgcctgt
gttgatggcaatgagttcagactggctcagatgtgtggccttcacattgtggtccatgct
gatgaactggaagagctgattaactactaccaggaccgtggctactttgaggagctgatc
acgctgttggaggctgctcttggactagagcgtgcccacatgggcatgtttactgagctg
gccatcctttactccaaattcaaaccacagaagatgagggagcacttggagcttttttgg
tcaagggttaacattccaaaggtactgcgggcagcagagcaggcccacctgtgggcagaa
ctggtctttttgtatgataaatacgaggagtttgataatgctatcattaccatgatgaac
caccctacagatgcctggaaggaaagccagtttaaagacatcatcaccaaggtggccaat
gtggagctttattacaaagcaatccagttttacttggagtttaaacccatgttactgaat
gaccttctcatagtgctttcgccaagactggatcattcacgcgctgtcaactttttcacc
aaggttaagcaacttccacttgtaaaaccgtacttgcgatcagtacagaacaacaacaac
aagtctgtcaatgaagcacttaacaacctcttcatcacagaggaagactacctggcactt
aggacatctatagatgcttatgataactttgacaacattacattggcccagcgcatggag
aagcatgaactcattgaatttagaagaattgctgcttatctcttcaaaggcaataaccgt
tggaaacaaagtgtggagctctgcaaaaaagacaaactttataaggatgccatgctttat
gcatcagagtcaaaggatatggagctggctgaggaactattgcagtggtttcttcaggag
gagaaaaaggagtgctttgcttcctgcctctttacttgctatgaccttctcagacctgac
gtggttttggaaaccgcctggaagtacaacattatggacttctccatgccatacttcata
caggttatgagggagtaccttagcaaggtggacaagctggagacctcagaatctttaaga
aaagaggaggagcaggcaacagaagcacaacctattgtgtatggtaccccccagctcatg
ctgaccgcaggcccaagtgtacctgttcccccacaacaggcttatggctataattactcc
gcagcacctggttatccacaggctcctcaggtgcaaccaggatttggctatgggatgtga
DBGET
integrated database retrieval system
