Trichomycterus rosablanca: 134332975
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Entry
134332975 CDS
T09921
Symbol
apc
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn04310
Wnt signaling pathway
trn04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134332975 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134332975 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134332975 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134332975 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134332975 (apc)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134332975 (apc)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
134332975 (apc)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
134332975 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
APC_r
EB1_binding
APC_rep
APC_u5
APC_u14
APC_N_CC
SAMP
Arm
APC_u9
APC_15aa
Suppressor_APC
APC_u15
APC_u13
ARM_ARMC5
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
134332975
NCBI-ProteinID:
XP_062870906
LinkDB
All DBs
Position
18:complement(15125536..15181965)
Genome browser
AA seq
2751 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGGIEDDTK
DSQGQTDFLERLKEMTLESNSFSGVKLRAKPPMPGSNLGCSADSSPMGSFSRKGMTNGGR
DSAGYLEELEKERSLLMAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENFSLQADMTRRQ
LEYEARQIRAAMEEQLGTCQDMEKRAQVRLVRIQQIEKDMLRLRQHLQPQPVEPEVKHDV
VAQPEVAQASGDTGIGSGACSQQGLSSTRDPDTVSEMSSGGSYSVPRRLTSHLGTKVEMV
YSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSVLLGNSRG
SKEARARASAALHNIIHSQPEDKRGRREIRVLHLLEQIRAYCETCWEWQESHERGVDQDK
NPMPSPMEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIGELLQVDCEIYGLTSDHYSV
TLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLRNLSWRA
DVNSKKTLREVGSVRALMECALDVQKESTLKSVLSALWNLSAHCTENKADICSVTGALAF
LVSTLTYRSQTNTLAIIESGGGILRNVSSLIATNEEHRQILRENSCLQTLLQHLKSHSLT
IVSNACGTLWNLSARNSKDQEALWEMNAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPA
KYKDANIMSPGSSLPSLHVRKQKALIEELDAQQLSETFDNLDNLSPKASHRNKPRHKHNV
YGDYDGVCRTDGYNASGVGVRSPYINTPVLSSPSPRENRGNPESVRTERDKSLDRERRGL
HPDPDSGKRMGMQMSTTAAQIAMVMEEVQSMHLGLDDRNTGSTSDPHAVPDDMIRRQTGV
HSHQNMYSFGKPDTSGRPCPMPKLEYRASSDSLNSVNSADGYGKRGQMKPVDSYSEDDES
KCCIYRKYPADLAHKIHSANHMEDDDGDLDTPINYSLKYSDEQLNSGRQSPNQSERWARP
KILDDELKRSDHKPQRSQSPGYPMYPEGNGEGEDKLKKYQPMYVKQDIPGGFRSRGSNEQ
NTSVSNHSMNKKINQTICTVDDFADDKPTNYSERYSEEEQLDEQPTNYSIKYNEDHHIEQ
PIDYSLKYSDSSSKKSVFSHSKTSSQSSVKDQLNQDSSSSVLSLKTQSRQKQLPPSSAQN
RPGPGRAIQKTACKTPTVNQETLQTYCVEDTPICFSRGSSLSSLSSEDEMDSCKRTVNVA
NNYSAVSVSEKPSNNVSDQRTTDSQSSGHFVRMKPARHQGHAAHGDGPRHHKAVEFSSGA
KSPSKSGAQTPKSPPEHYIQETPLVFSRCTSVSSLDSFESHSIASSVQSEPCSGMVSGII
SPSDLPDSPGQTMPPSRNKTPPPPPPRSTSIKPKVTVLPHAEKRDFAPRHAAVSAAVQKV
HVLPDNDTFLHFATESTPEGFSCASSLSALSLDEPFIQKDGELKIMPPVHEDDHVNLTEP
EKEETEEFKRQEKPSGSTEPEKDILDDSDDDDDSDILVACINSAMPTKSSRKPKKQTPQA
ASRIPPPVTRKTSQLPVYKLLPSQSRVQQQKHMALSHGEDMPRVYCVEGTPTNFSTATSL
SDLTIDSPPNELATIDISASQAEASNLRRDTVPEGKSAETQNIGVSFNAQCASNENEGDD
ILAECINSAMPKGKIHKPFRVQKMSDQPHHPPTATGSLVQQGIEKKKPTSPVKPMPQSSE
YRAKMIKRPEAPSNLSEAASYPDENTETKRTDCKIGPRGFADKTANPEERTRPGFAFDSP
HHYTPIEGTPYCFSRNDSLSSLDFEDDDLDLSKEKAELRKNKEHRKAPPSKSHQERSENA
NRVTSFQSSSAKPLQKTNYPMASKENTGPVPDEKQNFAIEDTPVCFSRNSSLSSLSDIDQ
ENNNKDCSHKDDPPQVEMPRPQVSGYAPKAFHVEDTPVCFSRNSSLSSLSIDSEDDLLQE
CISSAMPKKKKQPPRSKSDEQGVKEEKSLMADGILAEEPDLILDLTDTHSPISEQGLSPD
SESFDWKAIQEGANSIVSSLHQAAASLSRQGSSDSDSILSLKSGISIGSPFHLPANQDDN
KTASQKGPRILKPGEKGTLENKKKDEEAAKSLKGGKKVYKSLITGKPRPSLESIASQQRQ
PQVPVVPRGRTMVHVPGVRSSSPSTSPIPKKPPTRGQIAKPPVQGPNSGNSPRTMKTPSK
SDPSPARETPVPQGGSSKTPSRSGSRDSTPSRPPQQSLARPMQSPGRNSISPGRNSLTPN
KFSQIPRTVSPSAASKPPGSGRMSYASSGRQLGQQTPPKQTGLPRSASGIPRSESASKSL
NQTGSTGPSKKAELSRMSSTKSSGSESDRSEKPGLVRQSTFIKEAPSPTLKRKLEESASF
ESLSPSSPSQSQTPVSSPSLPDMSLSLPYQAGNWRKSPQSQNSSENGDGKASKRQDASRS
HSESPSRLPVNRTGTWKREHSKHSSSLPRVGTWKRTGSSSSILSASSESSDKGRSEDERQ
PSNPPQRSGQNKEGGLERKGTWKKVKDCETGPPMTLDLPDLTSDSASAQSKNEDVWVRIE
DCPINSPRSGKSPTGNTPPVIDGFSGKLHPSDWDLTEMQHKQPTINEHPAGRRPGSETNL
NLIRSCESLEKKVTDIKPVLSNPNIATEVHELTIAERTPFSSTNSSKHSSPSGAVAARVS
PFNYTPSPRKSSVEGLMPRPSQIPTPVNSSVKKRDSKSDTTESGSYIVTSV
NT seq
8256 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcatcatatgatcagctgctaaagcaagtggaggccctgaaaatggagaac
tccaacttgagacaagagctggaggacaactcgaaccatctcaccaagctggagacggag
gcctctaatatgaaggaggtgctgaagcagctacaaggaggtatcgaagacgacactaaa
gattcccaaggccagactgactttttggagagactgaaagagatgactctggagtcaaac
agtttttcgggggtgaagctgagagcgaagccgcccatgccggggtcaaacctggggtgc
tccgctgacagcagccccatgggatccttttccagaaagggaatgaccaatggtggtcga
gacagtgccggataccttgaggagttagaaaaagaaaggtccttgctgatggccgagctg
gagaaagaagaaaaagaaaaggactggtactatgcacaattacaaaatcttacgaaaagg
atcgacagcctgccactcactgaaaatttctctttacaggccgacatgactcgtaggcag
ctggaatacgaggctcgccagatccgggcagcaatggaggagcagctgggcacatgccag
gacatggagaagagggcacaggtgcgtttggtgcgaatccagcagatagaaaaggacatg
ctgaggttgagacagcacttacagccccagcctgtagaacctgaggtcaaacatgatgtt
gtagcccagcctgaggtggcacaggcatcgggagacactggcattgggagtggagcttgc
tctcagcagggtttaagctctactcgggatccagacacagtcagtgagatgagtagtggg
ggaagctactcggtcccacgcagactcaccagtcatctaggcaccaaggtggaaatggtg
tactccctgctctccatgctgggcacccatgacaaggacgacatgtcccgtactctcctg
gccatgtccagctctcaggacagctgcatagctatgcgtcagtctggctgcttgccgctg
ctcatccagcttctgcacggcaatgacaaggactcggtgctgctgggcaattccaggggc
agcaaggaggccagagccagggccagcgccgccctgcataacatcatccactcgcaacca
gaggacaagcgtggtcggagggagatccgggtgctccacttgctggagcagatcagggct
tattgtgagacctgttgggagtggcaggagagtcatgagcgtggagtagaccaagacaaa
aacccgatgccttcacctatggagcatcagatctgcccggcagtgtgtgttcttatgaag
ctttcctttgatgaggagcatagacatgctatgaatgaactgggtggactgcaggcgata
ggggaactattgcaggtggactgtgaaatttatggtcttaccagtgaccactacagtgtt
acactaagaagatatgctggcatggctctcaccaacttaacatttggagatgtagccaac
aaggccacactttgctctatgaagggatgtatgagggccatggtagcccaactgaaatct
gagagtgaggatttgcagcaggtaatcgcaagcgtgttgaggaacctgtcttggcgtgct
gatgtgaacagtaaaaaaacactgcgtgaggtgggcagtgttagggctctcatggaatgt
gccctagatgttcagaaggaatcgacgttaaaaagcgtccttagtgccctttggaactta
tctgcccattgtaccgaaaacaaagctgacatctgctctgttactggagctttagccttt
ttagtaagcactcttacctacagaagccaaaccaacacccttgccattatagaaagtgga
ggaggcatcctaaggaatgtatcaagcctcatagctacaaacgaggagcacaggcaaatc
ctgagggaaaatagctgtctgcagacccttcttcaacatcttaaatctcacagtttaacc
atagtgagcaatgcttgtggaactctttggaacctctctgctcgaaattccaaagaccag
gaggcactatgggaaatgaatgcagttagtatgctgaaaaacctaattcactccaagcac
aaaatgattgcaatgggcagtgctgcagctctgagaaacctcatggccaatcgacctgcc
aagtacaaggacgccaacattatgtctcctggatctagcctgccttcactacacgtacga
aaacagaaagcattaattgaggaactagacgcacagcaactttctgaaacatttgataac
ctagacaatttgagtcctaaagcctctcacaggaataagcctcggcacaagcacaacgtt
tatggcgattatgatggggtatgccggacagatggctataacgctagcggtgttggcgtt
cgctccccttacattaatacaccagttctctccagtccatcgccccgggaaaatagagga
aatccggaaagtgtcaggactgagagggacaagagtctggatagggagcgaagaggtctg
catccagatcctgactctgggaaaagaatgggaatgcagatgtctaccactgcagcacaa
atagcaatggtaatggaggaagtacagagcatgcacttaggcctagatgacagaaataca
ggatctacttctgaccctcacgctgtgccggacgacatgatcagacgtcagactggtgtt
cacagccaccaaaatatgtacagctttggtaaaccagacacatcaggcagaccctgccca
atgcccaagctagagtatagagcatccagtgacagtctaaatagcgtcaatagcgccgat
ggttatggcaaaagaggtcagatgaaacctgtagactcttattctgaagatgatgaaagc
aaatgttgtatatacagaaaatatccagctgatcttgcccataaaatacacagtgcaaat
catatggaggatgacgatggagatctggacacgccaattaactacagcttaaagtattcc
gatgagcagctcaactctggccgacaaagccccaaccagagtgagaggtgggcaaggccc
aaaatcttagatgacgagcttaaacgctcagatcacaaaccacaaaggtcacaaagccct
ggatacccaatgtacccagagggaaatggggaaggtgaagataaacttaaaaaatatcag
cccatgtatgttaaacaggatatcccaggaggattcagatcaagaggatccaatgagcaa
aacaccagtgtgtccaatcacagtatgaacaagaaaattaaccaaacaatttgcactgtg
gatgattttgctgacgacaaaccaaccaactacagcgagagatactcagaggaagaacaa
cttgatgaacagcccaccaattatagcattaaatacaacgaagaccaccacatcgaacaa
cctattgattacagtctaaagtattctgatagttcctccaaaaaatcagtgttcagtcat
tcaaagacatcttctcagagctctgtcaaggaccagttaaaccaggacagttcatcttct
gttttgtcactgaagactcaaagcaggcaaaagcagctcccaccatcttcggctcaaaat
cgaccagggcctggcagagctattcagaagacggcttgcaagactcctacagtcaatcaa
gaaacactacagacctattgtgtggaagacacgcctatatgtttctctagaggaagctcc
ctgtcatccttgtcttctgaagatgaaatggatagctgtaagcggactgttaacgtagca
aacaattattcagcggtgtctgtttctgagaagccgtccaataatgtttcagatcagcgc
acaacagatagtcaatcatctgggcattttgttagaatgaagcctgcaagacaccaaggg
catgctgcgcatggtgatggtcccagacatcacaaagcagtagaattttcatctggtgca
aaatccccatctaaaagtggtgctcaaacccccaaaagtccacctgagcattacatacaa
gagaccccgcttgtgtttagtagatgtacttcagtcagctctcttgacagctttgagagt
cactccattgcaagctctgtacagagcgagccatgcagcggaatggtcagcggaataatt
agtcctagtgatcttcccgatagtccgggtcaaacgatgcctcccagccgaaacaagact
ccaccaccaccacctccacgttcaacgtctataaagccgaaagtcactgttctaccccat
gctgagaaaagggattttgccccaaggcacgcagctgtcagtgctgccgttcagaaggtg
cacgtgcttccagataatgacacatttttacactttgctacagagagtaccccggaggga
ttttcatgtgcctccagccttagtgcattaagcctggatgaaccatttattcaaaaggat
ggcgagttgaagataatgcctcccgttcatgaggatgaccacgtgaacctaacagaacca
gaaaaagaggagactgaagagttcaagagacaagagaagccttcgggatctactgagccc
gagaaagacatactggacgactctgatgacgacgatgacagcgatatcctggtagcatgt
ataaattcagccatgcccacaaaatcttcaagaaaacccaagaaacaaacaccccaagct
gcctcaagaataccaccaccagtgacccgtaaaacaagtcaactcccagtttacaagcta
cttccttcacaaagcagagtacagcaacagaaacatatggcactaagtcatggagaggat
atgccacgggtatattgtgttgaaggtactcctaccaacttttccacagcgacttctctt
agtgaccttactattgattcaccaccgaatgagttagctaccattgacatctcagcatcc
caagcagaggcatccaatctcagacgagacaccgtcccagaaggaaaaagtgcagaaacg
cagaatattggggtttcttttaatgcacagtgtgcatctaacgagaacgaaggggatgac
attcttgccgagtgtattaattccgcaatgccaaaaggtaaaatacacaagccttttaga
gtgcagaaaatgtctgatcaacctcaccatcctcctaccgctactggcagtctagttcag
caagggattgaaaagaagaagccaacttccccagtaaaacctatgccacagagcagtgag
tatagagcaaaaatgataaagcgaccagaagcccccagtaacttatcagaagcagcatca
tatcctgatgaaaacactgaaacaaaaagaacagactgtaaaataggtcccagagggttc
gcagacaagactgccaatcctgaagaaagaacacgtccaggttttgcctttgattctccg
catcattacactccaattgaaggcaccccttattgtttttcacgaaacgattcactaagt
tcacttgactttgaagatgacgatctcgatctttctaaagaaaaggctgagcttcgaaaa
aacaaggaacacagaaaagcaccgccttcaaaaagccaccaagagcgttctgaaaatgcc
aacagagtgacttcttttcagagttcctcagccaagcctcttcaaaaaacaaattaccca
atggcatccaaagaaaacacaggaccagtgcctgatgaaaagcagaactttgcaattgaa
gacactcctgtgtgtttttcaagaaattcctctctgagttcactaagtgacattgatcaa
gaaaacaacaacaaagactgttcacacaaagacgacccacctcaagtggaaatgcccagg
cctcaagtgtctggctatgctccgaaagcctttcatgttgaggacactcctgtttgtttc
tctcgaaatagttctctcagctcacttagtattgattctgaagatgaccttctacaagag
tgtatcagttctgcaatgccaaagaaaaagaagcagccaccaagaagtaagagtgatgag
caaggggttaaagaggagaaaagcctgatggctgatggcattttagcagaagaaccagac
ctcattctcgatctcacggatacccacagccctatttcagagcaaggcttatcaccagac
tccgaatcatttgactggaaagccattcaagaaggtgccaattcaatcgttagcagttta
caccaggctgctgccagtctgtctaggcaaggctcgtctgattcagactctattctttct
ctgaaatctggtatatctattgggtcccctttccacctgcctgcaaatcaagatgataat
aagactgcttctcaaaaaggaccaagaattttaaaacctggtgagaaaggcactttggag
aacaaaaagaaagatgaagaagctgcaaaaagcttaaaaggtggcaagaaagtgtataaa
agtcttatcactggaaaaccacgaccaagtcttgagagcatagcctctcaacagagacaa
cctcaagttcctgtggttccaagaggaagaacaatggttcatgtgcccggagtgagaagc
agttctcccagtaccagccccatcccaaaaaagcctcctacacgtggccagattgcaaaa
cccccagtccagggaccaaattcaggaaactcaccaagaaccatgaagacgccatcaaag
tcagatcctagcccagccagagagacgcctgtgcctcaaggagggtcaagcaaaacccct
tcacgatcaggatccagagattccacaccatcaagaccacctcaacagtctcttgctaga
cccatgcagtctcctggtcgcaactctatctcaccaggcaggaatagcctaactcctaac
aaattttcccagattcctcggaccgtttcccctagtgctgcatcgaaacccccaggctct
ggccgaatgtcttatgcttcttcaggaagacagttgggtcagcaaactcctccaaaacaa
actgggctgccaagaagtgccagtggtataccaaggagcgaatctgcctccaaaagtcta
aatcagactggatccacgggcccttcaaaaaaggcagagttgtctcggatgtcctccaca
aaatcaagtgggagtgagtctgaccgatcagagaagcctggacttgttcgccagtccacg
tttatcaaagaggcacctagtccaacacttaaaaggaaattagaagaatctgcttccttc
gagtccttgtctccttcttctcctagccagtcacaaacaccagtatcaagcccatcttta
ccagacatgtctcttagtttgccctatcaagcaggcaactggagaaagtcccctcaaagc
caaaactcatctgaaaatggagatgggaaggcatctaaacgtcaggatgcctcccggtct
cattcggagagcccctcaaggctcccagttaacagaacagggacatggaaacgggagcac
agcaaacattcatcttctcttccaagggttggaacttggaaaagaacgggcagtagctcc
tccatactgtctgcgtcatccgagtccagtgataaaggcagaagtgaggatgaacgtcag
ccatcgaatccgcctcagagatctggacaaaacaaggagggtggactagaaaggaaagga
acatggaagaaggtgaaagactgtgaaactggaccacccatgactctagacctaccagat
ttaacaagtgattcagccagtgcccaatccaagaatgaggatgtctgggtgagaatagaa
gattgccctattaatagccctaggtctggcaagtcaccgaccggaaacacacctccagta
atcgatggtttttctggaaaactacaccccagtgattgggacttgactgaaatgcagcat
aagcagccaacaatcaacgagcatccagccggtcggcgtcctggatcggaaactaatctg
aacttgatcagaagttgtgagagccttgagaaaaaggtgactgacatcaagcctgtctta
agcaatcccaatattgccacagaagtccatgagctcaccattgctgagcgcacgcctttc
agctctaccaattccagcaaacacagctcccctagtggggctgtcgctgctagagttagt
ccttttaattacacgccaagccctagaaagagcagcgttgaaggtctaatgccgagacca
tctcaaatccctactccagttaacagtagtgtcaagaagagagactccaaatctgacaca
accgagagtgggtcctatattgtcacgtctgtgtaa
DBGET
integrated database retrieval system
