KEGG   Trichomycterus rosablanca: 134333245
Entry
134333245         CDS       T09921                                 
Symbol
trim101
Name
(RefSeq) tripartite motif containing 101
  KO
K10654  tripartite motif-containing protein 55
Organism
trn  Trichomycterus rosablanca
Pathway
trn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:trn00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134333245 (trim101)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trn04121]
    134333245 (trim101)
Ubiquitin system [BR:trn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    134333245 (trim101)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-B_box zf-RING_5 zf-RING_2 zf-C3HC4_3 RING_XB3-XBAT31 zf-C3HC4_4 zf-C3HC4_2 Trypan_PARP RNase_E_G zf-RING_6 Sina_RING NESP55 CP_ATPgrasp_2 DUF5024 MG280 Seryl_tRNA_N PLC-beta_C
Other DBs
NCBI-GeneID: 134333245
NCBI-ProteinID: XP_062871199
LinkDB
Position
19:complement(19372209..19383862)
AA seq 460 aa
MDFNSVHKDASLGSLEKQLICPICLEVFTKPVVILPCQHNLCRKCANELYQPSLFQVGIG
GRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDAYKKASASLKPPPLKPQSQITCEEHEG
EKLNVYCITCQIPTCSLCKVFGAHNSCQVAPLTEVCQQQKVELTDEIGSLIAKNEHIQAY
INDLEEICRTIEENSRNQKQILCEKFDRMCGILEERRKIMSQRITCEQDEKTSQVQNLVH
TYSEHVDSNVKLVQTALNTMEEPEMAAFVQTSGDIIEKVSNATTCTLTETLQPGYANMDH
YKVDFNAEERALCQLDFIKTEEEVSAETSLEPEPEPQSEPDPGPEPETEPEHDETYSLLG
SHVPDHELKSANCEIKNAFSETREDTRAQTESIVLQSPVYVPADIQTRAQSEACAVTKKE
VLCEKGGLNTQQAIIHILYVLAFLVILQKVLGSIHCFFCI
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggatttcaactctgttcacaaggatgcttcacttggttctctggagaagcagcttatc
tgccccatctgcttggaggtcttcaccaaacctgtggtcattctgccatgccagcacaac
ctttgtcgtaaatgtgccaatgaactttaccagccatctctgtttcaggttggaattggg
ggacgctttcgctgcccatcatgccggcatgaagttgttctggaccgccatggggtttat
gggctccagagaaacctactggtggaaaatatcattgatgcctacaagaaagcatctgca
agcttaaagcctcctcctctaaaaccccagtcacaaattacctgtgaggagcatgaaggg
gagaagctgaatgtttactgcatcacttgtcagattcccacctgttcactctgtaaagtg
ttcggggcacataactcctgccaagtggccccactcactgaggtctgccagcagcaaaag
gttgaactcactgatgagattggatcactgatcgccaaaaatgagcacattcaagcctac
attaatgacctggaggagatctgtagaactattgaggagaacagccgaaaccagaagcag
atactgtgtgagaagttcgatcggatgtgcggcatcctggaagagaggcgtaagatcatg
tcacagcgaatcacatgtgagcaggatgagaagaccagccaggttcagaatctggttcat
acttacagtgagcatgttgattcaaacgtgaagttggtgcaaacagctttaaacaccatg
gaggaaccagagatggctgcatttgtacagacctcaggagacattattgaaaaagtcagc
aatgcaactacctgcaccctgacggagaccttacagcccggatatgcaaacatggaccac
tataaagttgattttaatgcagaagagagagctctctgccagcttgatttcattaaaact
gaagaggaagtttcagcagagacttcattagaaccagaacctgaaccacaatctgagcca
gacccggggccagaacctgaaactgagcctgaacatgatgaaacatacagtctgctgggc
agccatgtaccagaccatgaactgaagtcagcaaactgcgagataaaaaatgctttttct
gagacgagagaggatacccgggcacaaacagaatccatagtgttgcagagtccagtttat
gttccagcagacatacaaaccagggcacaatcagaggcgtgtgcagtaacaaagaaagaa
gttctgtgcgagaaaggagggttaaatacacagcaggccatcatccatatactttacgtt
ctggcttttcttgtcatactccagaaggtgttggggagcattcactgcttcttttgcata
tag

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