KEGG   Trichomycterus rosablanca: 134333278
Entry
134333278         CDS       T09921                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
trn  Trichomycterus rosablanca
Pathway
trn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134333278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trn03019]
    134333278
   03041 Spliceosome [BR:trn03041]
    134333278
Messenger RNA biogenesis [BR:trn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     134333278
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     134333278
Spliceosome [BR:trn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    134333278
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_PARP14_1
Other DBs
NCBI-GeneID: 134333278
NCBI-ProteinID: XP_062871256
LinkDB
Position
19:23169736..23175127
AA seq 384 aa
MSKDSQPREPEQLRKLFIGGLSFETTDDSLRSYFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSCVEEVDAAMEARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKEDTEEEH
LRDYFTEFGKIEAVEIMVDRNTGTKRGFAFVTFDDHDAVDRIVIQKYHTINGHNSEVRKA
LSKQEMQNSSMNIRGRGGGSFGGRYGNNDFEGGRDGYGGGRGGRGGGGYGGGDNFNSGFR
GDGGYGGGGPGYGGNRGYGGGGGGPGYGNQGGGGYGGGGYGGSSGGGGGGGGGYDNYNNG
GGNFGGGNFGGGGGGGGNYNDFGNYNNQSSSYGPMKGNFGGGGGGRNSGGPYGSAYGGSS
GGGGGYGGGSGGGYGGSSGGGRRF
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgtcgaaagatagccaaccccgtgaaccggagcagctccggaagctgtttattggaggc
ctcagcttcgagacgacagacgacagtctgcgctcctattttgaacaatggggaacctta
acagactgtgtggtgatgaaggatcccaacacgaaacgctccaggggctttgggtttgtc
acatactcctgtgtggaagaagttgatgctgccatggaagcacgtcctcacaaagttgat
ggtcggctcgttgagcccaaacgggctgtgtctagagaggattccaacaaaccatttgct
cacacaacagtaaaaaagatatttgttggtggcatcaaggaggatacagaagaggagcat
ctgcgtgactacttcactgagtttgggaagattgaagcagttgaaataatggttgatcgt
aacacgggaaccaaaagaggctttgcctttgtaacttttgatgaccatgatgctgtggac
cgtattgtcattcaaaagtatcacaccattaatggccataactcagaagtgaggaaggcg
ctgtccaagcaagagatgcagaactcttccatgaacataaggggacgtggtggtggcagc
tttggtggccgttacggcaacaatgactttgagggtggcagagatggatatggcggtggt
cgaggtggaagaggtggtggaggatatggaggtggtgataacttcaacagtggttttcgc
ggtgatggtggctatggtggtggcggcccaggctatggtggaaacagaggttatggcgga
ggtggaggaggaccaggttatggcaaccaaggtggtggagggtatggcggcggtggatat
ggaggtagtagtggtggtggtggtggtggtggcggcggctacgacaactacaacaacggc
ggtggaaactttggcggtggtaactttggaggtggtggtggtggtggaggaaactacaat
gactttgggaactacaacaaccagtcatccagttatggccccatgaaaggaaactttgga
ggtggtggtggcggcaggaacagtggtggcccatatggctctgcatatggtggtagctca
ggaggtggtgggggctacggcggtggatctggaggtggatacggcggcagttctggaggt
ggcagacgattttaa

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