Trichomycterus rosablanca: 134333331
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Entry
134333331 CDS
T09921
Symbol
cnga1b
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134333331 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134333331 (cnga1b)
Ion channels [BR:
trn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
134333331 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Tim54
NPR3
Connexin
Sec62
Peptidase_U57
CDC45
Piezo_TM1-24
Serinc
Zip
DUF3043
DUF2828
OATP
SLC52_ribofla_tr
BSMAP
PFF1_TM
NatA_aux_su
Afi1
RNA_pol_Rpc4
DUF6465
Menin
Rtf2
DUF2126
Motif
Other DBs
NCBI-GeneID:
134333331
NCBI-ProteinID:
XP_062871349
LinkDB
All DBs
Position
19:566991..570889
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AA seq
636 aa
AA seq
DB search
MSNRVTPLVRPMILLEGVEEVTTENTEEITNLQCSDAGVIFNINNSNNNEEEEKKKKKKE
KKEKKEKKEKKEKKEKKEKKKKEQEEKEKEKEKEKAKKEEPKEIFVIDPAGNTYYNWLFI
ITCPVMYNWVLIIARACFEDLQHDFLIHWFILDFLSDLVYLADMVFRTRTGYLEQGLLVK
DEKKLRERYMASFQFKLDLVSMIPTDVFYLFVGLNYPEIRMNKLFRVNRLSEFFQRTETR
TNFPNVFRISNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVYPDITDPEFGRLVRKYAY
SMYWSTLTLTTIGETPPPEKDSEYFFVVTDFLVGVLIFATIVGNVGSMITNMNAARADFQ
ARIDAIKQYMSFRNVTKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIAINVHL
DTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDG
VTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDA
KAMLEEKGRQILMKDNLLDLELAKQGPDPKDMEEKVIKIETVLNDMQTRFARLLSQHEAS
QSRLKRRITKLESKIPTSTGVTVSEPTEATSTTEKK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcgcgtaacaccgcttgttcgtcccatgatcctcctggagggggtggaagag
gttaccacggaaaacacagaggagataacgaatcttcagtgctctgatgctggtgtgata
ttcaacatcaacaacagcaacaacaatgaggaagaggagaagaagaaaaagaagaaagaa
aagaaggagaaaaaggagaagaaggaaaagaaagaaaagaaggaaaagaaagagaagaag
aagaaagagcaagaggagaaagaaaaagagaaagaaaaggagaaagccaaaaaagaggaa
ccgaaggagattttcgtgattgatcctgcaggaaacacctactacaactggctcttcatc
atcacctgtcctgtgatgtataactgggtgctgatcatagccagagcctgcttcgaggac
ctacagcacgacttcttgatacactggtttatcttagatttcttatcagacctggtttac
ctggctgacatggtcttcaggacgaggacagggtatctggagcaaggtctgctggttaaa
gacgagaagaagcttcgagagcgatacatggcgagcttccagttcaagctggacctcgtc
tctatgatccccacagacgttttctacctcttcgtcggcctcaactaccccgagatccgt
atgaacaagcttttcagggtgaatcggctctccgagttcttccagcgcaccgaaacgagg
accaactttcccaacgtcttcaggatctccaacctcgtcatgtacatcgtcatcatcatc
cactggaatgcttgtctctactactccttctccaaagcgattggttttggagctgataga
ttcgtctatccagatattacggaccctgagttcggccgtctggtgaggaagtacgcgtac
agcatgtactggtccaccctgaccttgaccactattggtgaaactccccctcctgagaag
gattcagaatacttcttcgtggtgacagatttcctagtaggtgtcctgatttttgctacc
atcgtcggtaacgtcggctccatgatcaccaacatgaacgcagcgcgagcagactttcaa
gccagaattgatgccatcaagcaatacatgagcttccgtaacgtcaccaaagacctggag
aaacgcgtcatcaagtggttcgactacctttggaccaataagaaagctgtagacgagagg
gaagtccttaagtaccttccagacaagctcagagcagaaatcgccatcaacgtccacctg
gacacgctcaagaaagtgcgaatctttgcggattgtgaagcaggacttctggtcgagctg
gtactgaagcttcagccgcaggtttacagtcccggcgattatatatgcaaaaaaggcgac
atcggacgtgagatgtacatcatcaaggaaggaaagcttgccgtggtggctgacgatggc
gtcacgcagtttgtcgtcctgagcgatggaagctacttcggtgagatcagcatcctcaac
atcaagggcagcaaagctgggaaccgaagaaccgctaacattcgcagcattggctactca
gacctgttctgcctgtccaaggatgacctgatggaggcgctgaccgagtatccggacgca
aaggccatgttggaggaaaagggacggcagatcctcatgaaggacaatctgttggatcta
gagttggcgaagcagggtccggaccccaaggacatggaggagaaagtgataaagatcgaa
acggttctgaacgacatgcagacacgcttcgctcgtttactctctcaacacgaggcctca
cagagccgcctgaaaagacgcatcaccaaactggaaagcaaaatccccacctccaccggg
gttaccgtctccgaaccaaccgaggcgacatcaactacagaaaagaaatga
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