Trichomycterus rosablanca: 134333357
Help
Entry
134333357 CDS
T09921
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1
KO
K11471
additional sex combs-like protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134333357 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134333357 (asxl1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
134333357 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
Motif
Other DBs
NCBI-GeneID:
134333357
NCBI-ProteinID:
XP_062871380
LinkDB
All DBs
Position
19:5948529..5968776
Genome browser
AA seq
1624 aa
AA seq
DB search
MLHSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKNPAGSDDQSNTPAASSTASVGAE
GAEQESGDSTEATGENDASVDETSSSASCSTEPQTRLSRSSQSGRQRKKSVMMPRVVLTP
LKVNGEHVPSGAAGRRRDGSRGGPGPTLRARTELGWKRPQHFKSMRGLHSGPMKRNRGGV
EVDFETPGSILVNTNIRALINTRTFAAFPSHSQQQLLQLLPEVDRQIGPDGLARLSSSAL
NNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHGQKSGLTCE
EAMKLTMSDAGEASEAVLDSDAPPVATPKRRAVGRRRREGRIRRRSRADLRRRARRPLSK
TAPAAAAPTEEEDSQPASEVVATPTSPAPETAVVQTEVELQAESELEAPAETLCPEEAPS
PVPVSTPAPASTSSTCDEPEVSATLLPEVVEPAVASTSSPSSSSSSASSSSSPSSSPSST
SDQQGAFAASSDSSSSSSSSTAAVATDPLDDGASVITTGTAGTGASSRESSPAASPATSS
PATSSPAIQLKEQKRRPEESQAFTSFPEKRARLDERQSFRNTVDCVYSEKPQPTTEEPKV
PPIRIQLSRIKPPWVKGAPTYQICPRIVPPNEGSRRCGTGARTLADIKARAQQARAQREA
AAAVAATGDGTGSGGSGTGNGTGIPNCPSGKRSREHPGPVEPGGGGGGGGGGGGGRRGGG
VIGGGGGRVDVEEQDSPASSHSPGTQLQLSNVEKPQASTPQTVSSPSSVCSNPSGLPSES
PKTPTSSPQETDSPASQDQLDEICEVEEVAASSSDKTSEQTSDTPVPTPSESESLGSHQE
VRVEEADSNDSRTLTPNNSPVLSESVHLVPTSIPDSLPRFGAQGVDVIRTLAASAQSWEG
EQNLNEHRSGTTGVIQHGSDVKAPKETCVAAQNGFIGGSEKTGVLQEHKTEKVDSDSKYV
SSLPCLPDNRREEDNGMHSDSTETASDFENDTQEDDAADWTGAINHNGVPAHNTKSQNQP
VIQTPNRLTSCTLSLPQHQQPVIQAHVSNPAHNQTVIQAHFSNGVQSQTVISPQKQHSVL
SHSINLTQEQNLNSLTHTQPYLTHGEKDQSKAHSLHENSNGGKPLTLTENDSKLFSKGPA
DDPGFKNSAGVPFVRRIQGPARFVSSVEANNPLVTQLLQGSLLLEKVLPQTAGKLEINRP
PGAPPNFLSNCQPGGPPRNMVPRFRGPATTCGATELAELQHKALSAHVSPLPGRNYGPLP
LSNSQTRMPCFFDESGSRGSVVQQFGSQQSGSIIPPGAVPVITPLPSSSSSTQQSVDMNS
QNAQTLEHHTSQPSQTPERQAADIQHHSTNLSQSMCRTTPDAPSPTQGDLCPTEVVPTVK
ISWRPSKPQPPQSQSYQQQLSNASTVKHEVSARPSCQQALTKNSQTPTGGNGSVVVVTKK
EPASSMDGYASGRGAMEGLLNMEMSLARMAKKEQAKNHYSRHTDSSASPFSSSPSFTSAS
TFSYHLYGKLPKLQQSGGALSGDTGGSSSGFSYTANVSVVDGSSFSRSIADGVLQLRPRV
SVGNAGSPSTTLSIQAFADSAAEEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSC
LVVR
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgctccactcccaagtgcggggcgacagagtaaaaaacagtattttcttcaagcttccc
ggaagaatgagccttttcacactaaagaaaaacgccttgcagtggacaaagaacccagca
gggtctgacgatcagagcaacacaccagcagcttcatccacagcttcagtcggagcagag
ggagctgagcaggaaagcggcgactccacagaggcaactggtgagaatgatgcatcagtg
gatgaaacatcttcgagtgcctcctgttccacagaaccacagacccgactgagtcgttcc
tcacagtcagggaggcagaggaagaaatctgtgatgatgcctcgtgtggttcttactcca
ctcaaggtcaacggtgaacacgtaccatcaggagctgcggggaggcgcagggatgggtct
agggggggtcccggcccaacacttcgagcccgtaccgagctgggttggaaacgcccccag
cacttcaagagcatgcgtggccttcattcaggacccatgaagaggaatcggggcggtgtt
gaggtggattttgagacacctggctcaatcttggttaataccaacattcgcgctttgatt
aacacgcgcacctttgcggcgttcccttctcactctcagcaacagcttcttcagcttctg
cctgaggttgacagacagattggtcctgatggtcttgctcgacttagtagttcagcgctg
aacaatgagttcttcactcacgcctctcagagctggaaagagaggcttgcagaaggtgaa
ttcacacacgagatgcaggttcgttttagacaagagatggaaaaggaaaagaaagtggag
gcatggaaagagaaattctttgaagaataccatggtcaaaagtctggcttgacctgtgag
gaggcaatgaagcttacaatgagtgatgcaggagaagcatcagaggcagttctggactct
gacgctcctcctgtggccacgcctaagagaagagctgtcggaagacgacgaagagagggt
cgcattaggagacggtcacgtgctgatctcaggcgcagggcacgccgtccactcagcaag
acagctcctgcggcagcggctcctacagaagaggaagacagtcaacctgcttcggaggtc
gtggccacacctacgtcaccggccccagagactgctgtagtgcaaacagaggttgaactt
caggccgaatcagaactggaagccccagcagaaactctgtgtccagaggaagcaccttct
cctgtcccagtatccacacctgctccggcgtctacaagctctacctgtgatgaaccagaa
gtttctgccaccctcctgcctgaagttgttgagccagctgttgcctccacctcctctcct
tcttcatcctcttcctcagcatcatcatcatcctctccctcctcatctccctcttctacc
tctgaccagcaaggagcctttgcagcaagttcggactcatcatcttcctcctcatcctca
actgctgctgttgccactgaccccttggacgatggtgcctcggttatcactactggcaca
gcaggaactggtgccagcagcagggaaagcagcccagcagcaagtccagcaacatccagc
ccagcaacatccagccctgccatccagctcaaagagcagaaaaggagacccgaggagtcc
caggccttcaccagctttcccgagaaaagggcgcggctggatgaacgtcagtcctttcgt
aacacagttgactgtgtgtactcggaaaagccgcaacctacaacagaagaacccaaggtc
ccgccaatccggattcagctctcccggatcaaacctccttgggtcaaaggggcgccaaca
taccaaatctgtcctcgcatcgtgcccccgaacgaggggtcgcggcgctgtgggacgggg
gcgcgcactttggcagacatcaaggcccgtgcacagcaagcccgtgcacaacgcgaagcc
gctgctgctgttgcagccactggagacgggacagggtctggggggagcggcacggggaat
ggtactgggataccgaattgccccagcgggaagcgttcgagagagcacccgggtcccgtt
gaacctggaggaggaggagggggaggaggaggaggaggaggaggaagacgaggaggagga
gtcatcggaggaggaggaggaagagttgatgtggaggaacaggactcgcctgcaagctct
cattcgcctggaacacaattacagctttccaatgtagaaaagcctcaagcctctacccca
caaacagtatcgtctccatcctctgtatgctctaacccttcagggttgccatctgagtca
cctaaaacccccacttcatcacctcaggagacagacagcccagcctcccaggatcagctg
gacgagatctgcgaagtggaggaggtggctgccagcagtagtgataaaacctctgagcag
acctcagacacaccagtacccacccctagtgaatcagagtctttaggcagtcaccaggag
gttagggttgaagaagcagattcaaatgacagcagaacactgactcccaataattcaccg
gtgctcagtgaatcagttcatctagttcctacatccatacctgactctttgcctaggttt
ggtgcacagggtgtagatgtaataagaaccttagcagcatcagctcagtcttgggaaggt
gaacagaatctaaatgaacatcgttctggcactactggggtcattcaacatggctcagat
gtcaaagcccccaaagagacatgtgttgccgcccagaatggctttatagggggttcagag
aagactggagtcttgcaagagcataagactgaaaaggtggactctgatagtaaatatgta
agttctctcccatgtctgccagataacaggagagaagaggataatgggatgcacagtgac
tcgacagagacggcgtcagactttgagaatgatacccaagaggatgacgccgcagactgg
accggagcaataaaccataatggagtaccggcacataatacaaagtcccagaatcagcct
gtcattcagacgccaaatcgtcttacctcatgcactttgagcttgcctcagcaccaacag
ccagtcatccaggcccatgtttctaaccctgcccataaccaaactgtcattcaggcacat
ttttccaatggtgtacagagccagacggtaatttcaccccaaaagcaacattcagtcctt
agccatagcataaaccttacccaggagcagaacttaaattctttgacccatacacagcca
taccttacacatggagagaaagaccaaagcaaggcgcatagtctacatgagaacagcaat
ggtggaaagccacttaccttaacagagaatgattcaaaactatttagcaaagggcctgca
gatgatcctggatttaaaaactctgcaggtgttccttttgttcggagaattcaaggccca
gcccgatttgtttcctccgtagaggccaacaatcctctggttactcagctacttcaaggc
agcctgcttttggagaaagtcttgccccagacagcaggtaagctggagatcaatcgacct
cccggagcaccgccgaactttctgtcaaattgccagcctggtggacctcctaggaatatg
gttccccgcttcagaggtccagccacaacttgcggtgctacagaacttgctgagttacag
cacaaagccctttctgctcatgtgtcccctctgcctggtcgtaattatggtcccttacct
cttagcaattcccagactcgaatgccatgcttttttgatgagtccggttctcgtggttca
gttgtccagcagtttggttctcagcagtcagggagcatcatccctcctggtgcagtaccg
gtcatcactcctcttccttcctcctcttcctccacacagcaatcagtggacatgaactct
cagaatgctcagactttagagcatcacacctctcagccttcacaaactccagaaagacaa
gcagctgatattcagcatcactccactaacctctcccagtctatgtgcagaaccacacca
gatgccccctcccctacacaaggtgacctttgcccgactgaagttgtacctactgttaag
atcagctggcggccatcaaaaccacagccacctcaatctcagtcttatcagcagcagctc
tcaaatgcatctactgttaagcatgaggtctctgcacggccctcatgccagcaagctctt
accaaaaattcacagactccaactggtggcaatggttctgttgtagttgtaaccaaaaaa
gagccagcaagctctatggatgggtatgccagtggcaggggagcaatggaagggctgctt
aacatggaaatgtctcttgcgagaatggccaaaaaagagcaagctaaaaatcattattcc
cgtcatacagactcttcagcctctccgttttcctcctcaccttcctttacctcggcctca
actttctcctaccatctgtatggaaaactgcccaagttgcagcagagtggaggtgcacta
agtggagacaccggcgggtcctcatctgggttcagctatacagctaacgtttctgtagtg
gatggtagtagcttctcgcgcagcatagcggatggtgtgctgcaactgcggccgcgtgtt
agcgtcgggaatgctgggagtccgagcactacactcagtatccaggcatttgctgatagt
gctgcagaggaagtggctcttaagtgctcctgtcgtctcaaggccatgatcatgtgccag
gggtgtggtgccttctgccatgacgattgcattggcccttccaaactttgtgtttcgtgt
ctggtggtcagatag
DBGET
integrated database retrieval system
