Trichomycterus rosablanca: 134333486
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Entry
134333486 CDS
T09921
Symbol
abce1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134333486 (abce1)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
134333486 (abce1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA_22
AAA
AAA_15
AAA_29
RsgA_GTPase
Fer4_2
AAA_16
Fer4_10
AAA_23
NACHT
Fer4_4
TsaE
Fer4_21
AAA_30
Fer4_16
Fer4_7
Fer4_9
SRP54
Fer4_3
Motif
Other DBs
NCBI-GeneID:
134333486
NCBI-ProteinID:
XP_062871550
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All DBs
Position
19:complement(26267825..26282050)
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AA seq
599 aa
AA seq
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MADKNTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDTPPDWQEILAYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGSVGSILSRKDDTKTEQIVCGQLDLLHLRDRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLRAAITIRSLISPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRESSLVFKVAETAAEEEVKKMCRYQYPNMTKSMGDF
FLRITEGEFTDSEIMVMLGENGTGKTTFIRLLAGGLKPDGGGDVPILNVSYKPQKISPKF
KGSVRALLHDKIRDAYTHPQFVTDVMKPMQIESIIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
RDTTANTPQTLLAGMNKFLGQLEITFRRDPNNFRPRINKLNSIKDVDQKKTGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaacactcgaattgctatcgtcaatcacgacaagtgtaagcccaagaaa
tgccgacaggagtgtaagaaaagctgccctgtggtgaggatgggtaagctgtgtattgag
gtgactccgcagagcaagattgtgtggatctctgagtctctgtgtataggctgcggtatc
tgcatcaagaaatgtccttttggtgccttgtctatcgtgaacctgcccagcaacctggag
aaggagaccacacacagatactgtgcaaactcttttaaactgcacaggttgcccattcca
cgtcccggagaagtgttggggttggtgggcaccaacggtatcgggaaatccaccgctctc
aaaatcctggcagggaaacagaaacccaacctgggcaaatatgatactcccccagactgg
caggagattctggcctatttcagaggctctgagctgcaaaactatttcaccaagatcctg
gaggatgaccttaaggccatcgttaaaccacaatacgtcgatcagattcccaaaaccgtc
aagggctcagttggttccatcctgagcagaaaagatgacacgaagacagagcagatagtg
tgtgggcagctagatctgctgcacctgcgggaccgcaacgttgaggacctatcgggaggg
gagctgcagagatttgcctgcgccgtcgtctgcatccagagagcagacatctttatgttt
gatgagccgtccagttatcttgacgtgaagcaaaggctgagagctgccatcaccatccga
tccctcatctcaccagacaggtacatcatcgtggttgagcacgatctgagtgtgctggat
tatctgtctgactttatctgttgtctgtacggagtgcccagtgcatacggcgtcgtcacc
atgcccttcagcgtccgagaaggtatcaacatcttcctggacggctacgtcccgaccgag
aacctgcgtttccgcgagagctctctggtgttcaaagtagcggagacggcggcagaagag
gaggtgaagaagatgtgccgctaccagtaccccaacatgaccaagagcatgggtgacttc
ttccttcgcatcactgagggagagttcaccgactctgagatcatggtcatgctgggagag
aacggaactggaaaaaccacgttcatcaggctgttagctggaggtctaaaacctgatgga
ggaggtgatgtgcccattctgaacgtgagctacaaacctcagaagatcagccccaagttc
aagggcagcgttcgtgctttgctacatgataagatcagagacgcgtatacgcaccctcag
tttgtcaccgatgtcatgaagcccatgcagatcgagagcatcattgaccaagacgtccag
aatctgtccggtggcgagttgcagcgcgtggcgttggctctgtgtttgggaaagccggcc
gacgtgtacctgatcgacgagccgtctgcctacctggactctgagcagcgtctcatggct
gccagagtcatcaaacgattcatccttcatgcgaagaaaacggcgttcgtggtggagcac
gacttcatcatggctacgtacctggcagaccgagtcattgtgtttgacggaattccctcc
agagacaccaccgctaacacgccgcagactctgttggccggcatgaacaagttcctgggt
cagctggagatcaccttcaggagagatccgaacaacttcagaccaaggatcaacaaactc
aactccattaaggatgtggatcaaaagaaaactggcaactactttttcctggatgactga
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