Trichomycterus rosablanca: 134333557
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Entry
134333557 CDS
T09921
Symbol
rnf41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134333557 (rnf41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134333557 (rnf41)
04121 Ubiquitin system [BR:
trn04121
]
134333557 (rnf41)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134333557 (rnf41)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134333557 (rnf41)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134333557 (rnf41)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
134333557 (rnf41)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134333557 (rnf41)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
134333557 (rnf41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-RING_6
zf-Nse
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Sina_ZnF
U-box
zf-TRAF
zf-ANAPC11
zf-RING_10
Laminin_II
LXG
zf-TRAF_2
DUF641
Trimer_CC
Sos7
BROMI_N
DUF4795
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
134333557
NCBI-ProteinID:
XP_062871658
LinkDB
All DBs
Position
19:2266239..2279306
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFAQQQICPVDRTVV
TLAHLRPVPRIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCENNPKRPVVCEEGC
GLEMPKDEMHNHNCIKHLRSVVQQQQTKLADLEKTAAEHKHQLAEQKRDIQLLKAYMRAI
RSANPNMQNLEESIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNELIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgacgtcaccaggttccagggggaagtggatgaggatctgctctgtcccatt
tgcagcggcgtgctggaggagccagtgcaggccccgcactgcgagcatgccttctgtaac
gcctgcatcactcagtggttcgcgcagcagcagatctgcccggtggaccgcaccgtggtg
acgttggcgcacctgcgcccggtgccccgcatcatgcgcaacatgctgtccaagctgcag
atctcgtgcgacaacgccggcttcggctgcacggccacgctgcgcctcgaccagctccag
tcccacctcaaggactgcgagaacaacccgaagcgaccggtcgtctgtgaggagggctgc
gggctggagatgcccaaagacgagatgcacaaccacaactgcatcaagcacctgcgcagc
gtggtgcagcagcagcagacgaagctggcagacctggagaagacggcggccgagcacaaa
caccagctggccgagcagaaacgggacatacagctgctcaaagcgtacatgagggcgatc
cgcagcgccaaccccaacatgcagaatctggaggagagcatagagtacaacgagatcctg
gaatgggtgaactctctgcagccggcccgcgtgacgcgctggggcggtatgatctccacg
ccggacgccgtgctccaggcggtcatcaagcgctcgctcatcgacagcggctgcccgctg
tccatcgtcaacgagctcatcgagaacgcccacgagcgcaactggccccagggcctggcc
acgctggagacccggcagatgaaccgccggtactacgagaactacgtcgccaagcgcatc
ccgggcaagcaggcggtggtggtgatggcctgcgagaaccagcacatgggcgaagacatg
atcctggagccgggcctggtcatgatcttcgcccacggggtcgaggagatcttatag
DBGET
integrated database retrieval system
