Trichomycterus rosablanca: 134333625
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Entry
134333625 CDS
T09921
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134333625 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134333625 (l1cama)
04090 CD molecules [BR:
trn04090
]
134333625 (l1cama)
04091 Lectins [BR:
trn04091
]
134333625 (l1cama)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
L1 family
134333625 (l1cama)
CD molecules [BR:
trn04090
]
Proteins
134333625 (l1cama)
Lectins [BR:
trn04091
]
I-type lectins (Siglecs)
134333625 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_2
C2-set_3
Ig_5
Ig_4
V-set_CD47
Ig_6
Interfer-bind
Egh16-like
DUF3792
Motif
Other DBs
NCBI-GeneID:
134333625
NCBI-ProteinID:
XP_062871772
LinkDB
All DBs
Position
19:4561014..4587320
Genome browser
AA seq
1268 aa
AA seq
DB search
MPTTPLQQVGSRGRRALHPLLLLCALFLLALAPTPGKAAIHIPDNYQVKELKKPPEITAQ
PESINAFSSDEITLTCEATGNPPPTYRWVRNGTEFDPSVISGMAVSSDSGSFTIKDAPIN
EVRGKYSCYASNELGTAVSKEAYVITEETPSIQKENKEEKKVIEGSSVVLQCNSPNSSVT
PLIHWMDRKLKHIQQSERVNQGRDGNLYFSHVTMEDSRNDYTCNVQFVSARIIMVKEPIT
LKVEKSNSMRNRRPQMMRPSGKHSSYTVLRGQSLDLECIVQGLPTPLVKWVRRDGLLSES
RTSKESFNRLLRFTNITERDDGEYQCTASNSQGVVTHTYTVTVEAAPYWIKEPDSELYAP
GETVKLECQADGIPTPTLTWSINGNLISDVDPDSRRTVKGGTLILKDVKLSDTAVYQCQA
SNKHGNILINSYVYVIDLPAQILTKDKELYSVAEGQTAELHCETYGSPRPKITWKGESWD
SVMSNPRMTQLNNGTLQIHSVSQNDTGMYTCSVNEVELNITAELKVHNRTVIVEAPHDLH
VQRGKTATFTCQYQMDSNLNPPQIQWRKNKQKLYEYSDGDRYIIDGSELIINDVMDDDEG
VYTCEVITSLDMAKASGSLTVVDRPEPPSQLQITQPGDRSVTLSWTPGVDNKSPILGYVV
EVEETSTDRGDWEEIKRESGSSERTVLTLRPFLSYRFRVIAINKVGKSDPSKETDSYSTP
AARPDSNPEKVRSESVDPDTLVIMWKEMDQKSFNGPDFSYIVMWRKVVGSGPSWHSNFTT
SPPFVVTNVGDFSAFDIKVQAVNDLGEGPEPKSTIGYSGEDYPLEAPLNVGVVLLNSTAV
RVTWAPVNRETVRGHLMGYKIRLVYSGLHSNHHHRQKRIKKESQPQSEIVVTTGANEEKI
EIGGMQPYSLYSLTVSVFNSKGDGPESEPRPFQMPEGVPGAPTSLFLNSPSETEMKLHWT
KPAQENGVLKGYIVQYQQLDNVDSPMQEDKIEDHSVNEFTLKNLDPRSHYRFYLRGFTAA
GEGLPIVREGATILDRGPPQKISLSAGETSLNLSWVTNERHRSVDFHIKYLNKDDGRTWQ
QSEKLNSSQSFYSLQGLKPGTQYRLEFVASSGIFWETDISTEGSGVAQQKSFATEGWFIG
IICALVLLLLILLILCFIKRSKGGKYSVKEKEEDQVDSEARPMKDDTFGEYRSLESDNEE
KCTASQPSLCENSKLCSSEGGLDYSNGHSVQTDVIIDDSLGSQYSADRDGPLNPATNNGL
PNSGAILD
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacaccactacagcaggttggcagcagggggcgccgtgcgcttcacccactc
ttgctcctctgtgccctcttcctcctggcactcgcgcccacaccgggcaaggctgccatc
cacattccagacaactatcaagtaaaagaacttaagaagcctccagagatcactgcccaa
cctgagtccatcaatgccttctcgtcggatgaaattacgctcacctgtgaggccactgga
aatcctccgcccacatatcgatgggtaaggaatggaacggaatttgacccatcggtcata
tctggtatggccgtgtcctcagattcagggagcttcactatcaaggacgcacctataaat
gaggtcaggggcaaatacagctgctatgcatcgaatgagctcggcacggctgtgtctaaa
gaggcttatgttatcactgaagaaactccttcaatacaaaaggagaataaggaggagaag
aaggtcattgagggaagttctgtagtattacagtgcaactctccaaacagctctgtcacc
cccctcattcactggatggaccggaagctgaagcacatccagcagagtgaacgggtgaat
cagggtcgagatggaaacctctacttctcccacgtgaccatggaggacagcaggaacgat
tacacctgcaatgttcagtttgtgtccgcccgcatcatcatggtcaaagagcccatcacc
ctaaaggttgagaaatctaactcaatgcggaacagacgtccacagatgatgagaccgagt
ggtaaacacagttcctatacagtactgaggggtcaaagcctggatctggagtgcatcgtc
cagggcctcccaactcccttagttaagtgggtaaggagagacggattgctctctgaatct
cgtacatctaaggagagctttaacaggctgctgcgtttcaccaacattacagaacgggat
gatggcgaataccagtgcactgccagcaactcgcagggcgtcgtcacacacacgtatacc
gtcactgtggaagctgcaccatattggatcaaggaaccagacagtgaactctatgctcca
ggagagacagtaaaattggagtgtcaggcagatggaatcccgacacctacactgacctgg
agcatcaatggaaatcttatctctgatgtggatccagactcccggcgtacagtaaaggga
ggaaccctcatactgaaagacgtgaagctctctgatactgctgtgtaccagtgccaggcc
tccaacaagcatggcaacattctcattaactcctatgtctatgtcattgatctgccagca
caaatcctgacgaaggataaagagctgtacagtgtagcagagggacagacggctgagctg
cactgtgaaacctacgggtctccccggcccaagatcacatggaaaggtgaatcctgggac
tctgtgatgtctaatcctagaatgactcagctgaacaacggtactctgcagatacacagt
gtgtcccagaatgataccggcatgtacacctgctcagtgaatgaagtcgaactcaacatc
actgctgagctgaaggttcacaaccggacagtgattgttgaggcaccacatgacttgcat
gttcaaagggggaaaacggccacctttacctgccagtatcagatggacagcaatctgaat
ccaccacaaatccaatggaggaaaaacaaacagaagctgtatgagtactctgatggagac
cggtacataattgatgggtcagagctgataataaatgatgtcatggacgatgacgagggc
gtttacacttgcgaggtgataacaagtctggacatggctaaagcgagcggctccctcact
gtcgtcgaccgccctgaacctccttcccagctacagattacccagcctggagatcgctca
gttaccctctcctggactcctggagttgacaacaagagccctatactagggtacgtggtg
gaagtcgaggaaacaagcactgatcgaggagattgggaggagattaagcgtgagtctgga
tcctctgagcgcactgtgcttactcttagaccattcctctcgtaccgcttcagggtcatc
gccatcaacaaggtcggcaagagtgacccaagcaaggaaacagactcctactccactcct
gcggctcggccagacagtaaccctgaaaaagtgcgcagtgagtctgtagacccagacaca
ctcgtcattatgtggaaggagatggaccagaagagctttaatggtccggatttcagctac
atcgtcatgtggaggaaggttgtaggcagcgggccatcttggcactccaactttaccact
tcaccgccttttgttgtcactaatgttggcgacttcagtgcatttgacatcaaggtgcaa
gctgttaatgatctgggagaggggccagaacccaaatctaccattggctactctggagag
gattatccattagaggctccgctgaatgttggggtggttctgctgaacagcactgctgtc
agggtaacgtgggcaccagtaaacagagagactgtgagaggacatctgatgggctacaag
atccgcctggtgtacagtggactccacagcaaccatcaccaccggcaaaagcgcataaag
aaggaaagtcagccacaaagtgagattgtggtaacaactggggctaatgaggagaagata
gaaataggaggcatgcagccatactccttatattctctcacggtcagtgtcttcaacagc
aaaggagatggtccagagtcagaacctagaccctttcagatgcccgaaggagttcctggt
gctcctacgtcactgtttttgaacagtccatcagaaaccgagatgaaactgcactggact
aaacctgcacaagaaaatggagttctgaaaggatacatagtccagtaccaacagttagac
aatgtggacagtcccatgcaggaggacaagattgaagaccacagtgtgaacgagttcacc
cttaaaaatctggatcctcgcagccattaccgtttctatctgcggggattcaccgcagct
ggagaaggcttgcctattgtcagagaaggagccacaatacttgatagaggtccaccacag
aagatcagtctgtctgctggagagacgtcactcaatctaagctgggttactaatgagaga
cataggagcgtggattttcatattaaatacctgaataaggacgatggtcgaacgtggcag
cagtcagagaaattaaactcgtctcagtccttttactcgctgcagggtttaaaacccggc
acacagtaccgactggaatttgtagccagcagtggcatcttctgggagactgacatttcg
acagagggttcaggagtggcgcagcagaagagctttgcaactgagggctggttcatcgga
atcatctgtgcccttgtgctgctgttactaatacttcttattctgtgttttatcaaacgc
agtaaaggtggaaaatactcggtaaaagagaaggaggaggaccaggtggattcggaggcc
aggccgatgaaggatgatacgtttggggagtacagatcgcttgagagtgacaatgaggag
aagtgcacagccagccagccgtccctgtgcgagaacagcaagctgtgcagcagcgaagga
ggcctggactacagcaacggtcacagcgtccagacggacgtgatcatagacgactctctg
gggagccagtacagcgcagacagagatgggccactcaaccctgccaccaataacggcctg
cccaactctggtgccatcctcgattag
DBGET
integrated database retrieval system
